Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33840

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
3,548,056	+				-1.7
3,548,070	+				+1.9
3,548,159	+				+0.3
3,548,159	+				-1.6
3,548,159	+				-0.2
3,548,159	+				-1.6
3,548,205	-				+1.2
3,548,210	-		PGA1_c33830	0.10	-0.9
3,548,217	-		PGA1_c33830	0.11	+0.8
3,548,217	-		PGA1_c33830	0.11	+0.6
3,548,217	-		PGA1_c33830	0.11	-0.0
3,548,301	+		PGA1_c33830	0.20	-0.4
3,548,337	+		PGA1_c33830	0.24	-0.4
3,548,345	-		PGA1_c33830	0.25	+1.1
3,548,360	+		PGA1_c33830	0.27	+1.6
3,548,400	-		PGA1_c33830	0.31	+1.1
3,548,449	-		PGA1_c33830	0.36	-1.5
3,548,477	+		PGA1_c33830	0.39	+1.0
3,548,478	+		PGA1_c33830	0.40	-1.2
3,548,516	+		PGA1_c33830	0.44	-0.6
3,548,525	+		PGA1_c33830	0.45	+0.7
3,548,525	+		PGA1_c33830	0.45	+1.2
3,548,533	-		PGA1_c33830	0.46	-0.4
3,548,583	-		PGA1_c33830	0.51	-1.3
3,548,590	+		PGA1_c33830	0.52	+0.5
3,548,595	+		PGA1_c33830	0.52	-0.1
3,548,596	+		PGA1_c33830	0.53	-0.4
3,548,629	-		PGA1_c33830	0.56	+0.6
3,548,701	+		PGA1_c33830	0.64	+0.2
3,548,748	-		PGA1_c33830	0.69	+0.2
3,548,748	-		PGA1_c33830	0.69	-0.0
3,548,775	+		PGA1_c33830	0.72	-0.1
3,548,776	+		PGA1_c33830	0.72	+1.6
3,548,783	-		PGA1_c33830	0.73	-2.9
3,548,829	+		PGA1_c33830	0.78	+0.6
3,548,829	+		PGA1_c33830	0.78	+0.1
3,548,837	-		PGA1_c33830	0.79	+0.3
3,548,837	-		PGA1_c33830	0.79	+1.2
3,548,837	-		PGA1_c33830	0.79	-0.8
3,548,837	-		PGA1_c33830	0.79	+0.4
3,548,837	-		PGA1_c33830	0.79	-3.2
3,548,839	-		PGA1_c33830	0.79	+0.5
3,548,852	-		PGA1_c33830	0.81	-0.0
3,548,881	+		PGA1_c33830	0.84	-1.3
3,548,927	+		PGA1_c33830	0.89	-1.6
3,548,956	-				-0.1
3,548,994	-				-0.6
3,548,996	+				-0.4
3,549,157	-		PGA1_c33840	0.15	-1.1
3,549,203	+		PGA1_c33840	0.20	-1.4
3,549,203	+		PGA1_c33840	0.20	-1.3
3,549,203	+		PGA1_c33840	0.20	-1.4
3,549,206	-		PGA1_c33840	0.20	+0.1
3,549,211	-		PGA1_c33840	0.21	+0.2
3,549,277	+		PGA1_c33840	0.28	+1.3
3,549,277	+		PGA1_c33840	0.28	-0.6
3,549,285	-		PGA1_c33840	0.29	-0.3
3,549,290	-		PGA1_c33840	0.29	-1.4
3,549,338	+		PGA1_c33840	0.35	-0.1
3,549,338	+		PGA1_c33840	0.35	+0.7
3,549,410	-		PGA1_c33840	0.42	-1.1
3,549,428	+		PGA1_c33840	0.44	-0.3
3,549,428	+		PGA1_c33840	0.44	-0.9
3,549,436	-		PGA1_c33840	0.45	+1.5
3,549,527	+		PGA1_c33840	0.55	-0.8
3,549,537	+		PGA1_c33840	0.57	+1.7
3,549,537	+		PGA1_c33840	0.57	-1.3
3,549,546	-		PGA1_c33840	0.58	+1.1
3,549,555	+		PGA1_c33840	0.58	-0.2
3,549,560	+		PGA1_c33840	0.59	+0.1
3,549,568	-		PGA1_c33840	0.60	-1.6
3,549,787	+		PGA1_c33840	0.84	-0.0
3,549,795	-		PGA1_c33840	0.85	-0.1
3,549,825	+		PGA1_c33840	0.88	-1.4
3,549,838	-		PGA1_c33840	0.90	+0.5
3,549,840	+				+0.4
3,549,886	+				-0.7
3,549,894	-				-0.1
3,549,902	+				+0.4
3,549,916	+				-1.8
3,549,924	+				+1.5
3,549,939	+				+0.4
3,549,947	-				+0.3
3,549,949	+				-1.0
3,549,952	-				-0.2
3,549,957	-				-1.6
3,549,957	-				+1.2
3,550,007	+				-1.7
3,550,007	+				+1.7
3,550,007	+				-1.6
3,550,125	+		PGA1_c33850	0.17	-1.9
3,550,192	+		PGA1_c33850	0.23	-0.9
3,550,277	-		PGA1_c33850	0.31	+0.1
3,550,283	-		PGA1_c33850	0.31	-0.5
3,550,283	-		PGA1_c33850	0.31	+1.2
3,550,287	+		PGA1_c33850	0.31	+1.2
3,550,294	-		PGA1_c33850	0.32	-2.2
3,550,294	-		PGA1_c33850	0.32	-2.1
3,550,329	+		PGA1_c33850	0.35	+0.5
3,550,329	+		PGA1_c33850	0.35	-0.3
3,550,337	-		PGA1_c33850	0.36	-0.1
3,550,482	+		PGA1_c33850	0.49	+1.8
3,550,490	-		PGA1_c33850	0.50	-0.7
3,550,598	-		PGA1_c33850	0.60	-2.1
3,550,600	-		PGA1_c33850	0.60	-1.4
3,550,634	-		PGA1_c33850	0.63	+0.1
3,550,751	-		PGA1_c33850	0.74	+0.0
3,550,802	-		PGA1_c33850	0.78	+0.2
3,550,843	+		PGA1_c33850	0.82	+0.8
3,550,846	-		PGA1_c33850	0.82	-0.8
3,550,851	-		PGA1_c33850	0.83	+0.2
3,550,877	-		PGA1_c33850	0.85	-2.5
3,550,926	+		PGA1_c33850	0.89	+0.2