Strain Fitness in Marinobacter adhaerens HP15 around HP15_3244

Experiment: m.b. Chlorite 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3242 and HP15_3243 are separated by 9 nucleotidesHP15_3243 and HP15_3244 are separated by 116 nucleotidesHP15_3244 and HP15_3245 are separated by 9 nucleotides HP15_3242: HP15_3242 - ferric uptake regulator, CjrA, predicted, at 3,396,473 to 3,397,483 _3242 HP15_3243: HP15_3243 - appr-1-p processing domain protein, at 3,397,493 to 3,398,026 _3243 HP15_3244: HP15_3244 - uncharacterized conserved protein UCP029033, periplasmic protein, at 3,398,143 to 3,398,853 _3244 HP15_3245: HP15_3245 - hyaluronidase, at 3,398,863 to 3,399,987 _3245 Position (kb) 3398 3399Strain fitness (log2 ratio) -1 0 1 2at 3397.219 kb on + strand, within HP15_3242at 3397.227 kb on - strand, within HP15_3242at 3397.318 kb on + strand, within HP15_3242at 3397.318 kb on - strand, within HP15_3242at 3397.346 kb on + strand, within HP15_3242at 3397.349 kb on - strand, within HP15_3242at 3397.363 kb on + strand, within HP15_3242at 3397.391 kb on - strandat 3397.520 kb on + strandat 3397.540 kb on - strandat 3397.638 kb on + strand, within HP15_3243at 3397.655 kb on + strand, within HP15_3243at 3397.721 kb on - strand, within HP15_3243at 3397.829 kb on + strand, within HP15_3243at 3397.837 kb on - strand, within HP15_3243at 3397.837 kb on - strand, within HP15_3243at 3397.843 kb on + strand, within HP15_3243at 3398.075 kb on + strandat 3398.076 kb on - strandat 3398.199 kb on + strandat 3398.212 kb on - strandat 3398.217 kb on - strand, within HP15_3244at 3398.262 kb on - strand, within HP15_3244at 3398.312 kb on + strand, within HP15_3244at 3398.335 kb on + strand, within HP15_3244at 3398.392 kb on - strand, within HP15_3244at 3398.445 kb on + strand, within HP15_3244at 3398.450 kb on + strand, within HP15_3244at 3398.475 kb on + strand, within HP15_3244at 3398.521 kb on - strand, within HP15_3244at 3398.521 kb on - strand, within HP15_3244at 3398.542 kb on + strand, within HP15_3244at 3398.555 kb on - strand, within HP15_3244at 3398.576 kb on - strand, within HP15_3244at 3398.590 kb on + strand, within HP15_3244at 3398.661 kb on + strand, within HP15_3244at 3398.676 kb on - strand, within HP15_3244at 3398.791 kb on - strandat 3399.124 kb on - strand, within HP15_3245

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.16 mM
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3,397,219 + HP15_3242 0.74 +2.6
3,397,227 - HP15_3242 0.75 -0.0
3,397,318 + HP15_3242 0.84 -0.1
3,397,318 - HP15_3242 0.84 +1.3
3,397,346 + HP15_3242 0.86 +0.4
3,397,349 - HP15_3242 0.87 +0.1
3,397,363 + HP15_3242 0.88 -0.2
3,397,391 - +0.1
3,397,520 + -0.2
3,397,540 - +1.4
3,397,638 + HP15_3243 0.27 +0.4
3,397,655 + HP15_3243 0.30 +0.7
3,397,721 - HP15_3243 0.43 -0.4
3,397,829 + HP15_3243 0.63 -0.6
3,397,837 - HP15_3243 0.64 -0.5
3,397,837 - HP15_3243 0.64 -1.0
3,397,843 + HP15_3243 0.66 +0.6
3,398,075 + -1.6
3,398,076 - +1.2
3,398,199 + +0.3
3,398,212 - -0.7
3,398,217 - HP15_3244 0.10 -0.3
3,398,262 - HP15_3244 0.17 -0.3
3,398,312 + HP15_3244 0.24 -0.8
3,398,335 + HP15_3244 0.27 -0.5
3,398,392 - HP15_3244 0.35 -0.2
3,398,445 + HP15_3244 0.42 +0.6
3,398,450 + HP15_3244 0.43 -1.2
3,398,475 + HP15_3244 0.47 -0.0
3,398,521 - HP15_3244 0.53 -0.9
3,398,521 - HP15_3244 0.53 -0.7
3,398,542 + HP15_3244 0.56 -0.2
3,398,555 - HP15_3244 0.58 -0.0
3,398,576 - HP15_3244 0.61 +0.5
3,398,590 + HP15_3244 0.63 +1.3
3,398,661 + HP15_3244 0.73 -0.3
3,398,676 - HP15_3244 0.75 -0.5
3,398,791 - -0.3
3,399,124 - HP15_3245 0.23 -0.2

Or see this region's nucleotide sequence