Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28900

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
3,030,770	-		PGA1_c28880	0.66	+0.5
3,030,795	+		PGA1_c28880	0.70	-0.1
3,030,803	-		PGA1_c28880	0.72	+0.6
3,030,842	+		PGA1_c28880	0.78	-1.1
3,030,874	+		PGA1_c28880	0.84	-0.2
3,030,889	+		PGA1_c28880	0.86	+0.0
3,030,889	+		PGA1_c28880	0.86	+0.5
3,030,889	+		PGA1_c28880	0.86	+1.0
3,030,889	+		PGA1_c28880	0.86	-1.8
3,030,897	-		PGA1_c28880	0.88	+0.5
3,030,897	-		PGA1_c28880	0.88	+1.0
3,030,986	-				-0.1
3,030,986	-				+1.6
3,030,986	-				+0.2
3,031,010	-				+0.4
3,031,060	+		PGA1_c28890	0.12	+1.6
3,031,060	+		PGA1_c28890	0.12	+2.1
3,031,060	+		PGA1_c28890	0.12	-0.8
3,031,060	+		PGA1_c28890	0.12	+1.1
3,031,068	-		PGA1_c28890	0.13	+1.8
3,031,097	-		PGA1_c28890	0.17	-1.5
3,031,130	-		PGA1_c28890	0.21	+0.3
3,031,134	+		PGA1_c28890	0.21	+2.5
3,031,167	+		PGA1_c28890	0.26	+0.1
3,031,183	-		PGA1_c28890	0.28	+0.1
3,031,185	+		PGA1_c28890	0.28	-0.7
3,031,193	-		PGA1_c28890	0.29	-2.1
3,031,295	-		PGA1_c28890	0.42	-0.5
3,031,298	+		PGA1_c28890	0.42	+0.5
3,031,306	-		PGA1_c28890	0.43	-2.1
3,031,331	+		PGA1_c28890	0.46	-1.1
3,031,331	+		PGA1_c28890	0.46	+0.5
3,031,331	+		PGA1_c28890	0.46	+1.5
3,031,331	+		PGA1_c28890	0.46	+0.8
3,031,339	-		PGA1_c28890	0.47	+0.1
3,031,339	-		PGA1_c28890	0.47	-1.3
3,031,350	+		PGA1_c28890	0.49	-0.2
3,031,415	+		PGA1_c28890	0.57	-0.5
3,031,423	-		PGA1_c28890	0.58	-1.8
3,031,428	-		PGA1_c28890	0.58	+1.5
3,031,467	-		PGA1_c28890	0.63	+0.8
3,031,489	-		PGA1_c28890	0.66	+0.9
3,031,559	-		PGA1_c28890	0.75	-0.5
3,031,703	+				+0.5
3,031,739	+				+0.0
3,031,774	+				+2.5
3,031,786	+				-0.7
3,031,793	+				-0.1
3,031,807	+				-0.9
3,031,815	-				+0.7
3,031,815	-				+0.5
3,031,815	-				+0.5
3,031,828	-				+0.0
3,031,856	-		PGA1_c28900	0.11	+1.0
3,031,856	-		PGA1_c28900	0.11	-0.9
3,031,858	-		PGA1_c28900	0.11	+0.5
3,031,871	+		PGA1_c28900	0.13	+0.9
3,031,871	-		PGA1_c28900	0.13	+1.2
3,031,899	-		PGA1_c28900	0.16	+2.3
3,031,921	+		PGA1_c28900	0.18	+2.5
3,031,941	+		PGA1_c28900	0.21	+2.7
3,031,949	-		PGA1_c28900	0.22	-2.1
3,031,954	-		PGA1_c28900	0.22	+1.0
3,031,957	+		PGA1_c28900	0.22	-0.1
3,031,975	-		PGA1_c28900	0.24	+2.0
3,031,982	+		PGA1_c28900	0.25	+0.6
3,032,073	-		PGA1_c28900	0.35	+0.9
3,032,079	+		PGA1_c28900	0.36	+1.5
3,032,112	+		PGA1_c28900	0.40	+0.9
3,032,112	+		PGA1_c28900	0.40	-1.5
3,032,120	-		PGA1_c28900	0.41	+1.2
3,032,120	-		PGA1_c28900	0.41	+0.3
3,032,120	-		PGA1_c28900	0.41	+1.1
3,032,137	-		PGA1_c28900	0.43	-0.8
3,032,142	-		PGA1_c28900	0.43	-0.2
3,032,201	-		PGA1_c28900	0.50	-0.5
3,032,212	+		PGA1_c28900	0.51	-0.2
3,032,212	+		PGA1_c28900	0.51	+1.8
3,032,220	-		PGA1_c28900	0.52	+0.4
3,032,220	-		PGA1_c28900	0.52	+0.8
3,032,220	-		PGA1_c28900	0.52	-2.1
3,032,220	-		PGA1_c28900	0.52	-0.9
3,032,225	-		PGA1_c28900	0.53	+0.8
3,032,288	+		PGA1_c28900	0.60	+1.4
3,032,296	-		PGA1_c28900	0.61	+0.8
3,032,325	+		PGA1_c28900	0.64	-0.5
3,032,325	+		PGA1_c28900	0.64	+1.1
3,032,325	+		PGA1_c28900	0.64	-1.5
3,032,325	+		PGA1_c28900	0.64	-1.5
3,032,325	+		PGA1_c28900	0.64	+1.2
3,032,325	+		PGA1_c28900	0.64	+0.5
3,032,333	-		PGA1_c28900	0.65	+1.1
3,032,400	-		PGA1_c28900	0.72	+0.2
3,032,463	+		PGA1_c28900	0.79	+0.3
3,032,469	+		PGA1_c28900	0.80	+2.5
3,032,476	+		PGA1_c28900	0.81	+1.0
3,032,477	-		PGA1_c28900	0.81	+0.3
3,032,486	+		PGA1_c28900	0.82	+0.9
3,032,487	+		PGA1_c28900	0.82	+0.5
3,032,489	-		PGA1_c28900	0.82	+0.2
3,032,494	-		PGA1_c28900	0.83	-0.7
3,032,564	-				-0.4
3,032,564	-				+0.6
3,032,564	-				+0.1
3,032,566	-				-1.8
3,032,606	+				+0.8
3,032,606	+				+2.1
3,032,614	-				+0.0
3,032,627	+				+0.5
3,032,627	+				-0.7
3,032,627	+				-1.1
3,032,635	-				+1.1
3,032,647	-				-1.8
3,032,649	+				+0.5
3,032,681	-				+0.6
3,032,735	-				+0.5
3,032,761	-				+1.8
3,032,784	+				+0.5
3,032,830	+				+0.0
3,032,835	+				+0.8
3,032,889	-		PGA1_c28910	0.20	+0.6
3,032,958	-		PGA1_c28910	0.35	-0.7
3,032,960	+		PGA1_c28910	0.35	+0.9
3,032,960	+		PGA1_c28910	0.35	+0.1
3,032,960	+		PGA1_c28910	0.35	-1.1
3,032,960	+		PGA1_c28910	0.35	-0.5
3,032,962	+		PGA1_c28910	0.36	+0.4
3,032,968	-		PGA1_c28910	0.37	+0.3
3,032,968	-		PGA1_c28910	0.37	+2.1
3,032,968	-		PGA1_c28910	0.37	+0.5
3,032,970	-		PGA1_c28910	0.37	+1.0
3,032,975	+		PGA1_c28910	0.38	+2.0
3,033,041	-		PGA1_c28910	0.52	+3.0
3,033,073	+		PGA1_c28910	0.59	+1.5
3,033,073	+		PGA1_c28910	0.59	+0.0
3,033,132	+		PGA1_c28910	0.72	+0.7
3,033,134	+		PGA1_c28910	0.72	+0.5
3,033,176	-		PGA1_c28910	0.81	-0.1
3,033,196	-		PGA1_c28910	0.85	+3.0
3,033,227	-				+0.5
3,033,237	+				-0.3
3,033,237	-				+0.1
3,033,249	+				-0.5
3,033,249	+				+1.4
3,033,257	-				+1.2
3,033,257	-				+0.5
3,033,267	+				-1.9
3,033,270	-				+0.5
3,033,280	-				+2.0
3,033,458	+		PGA1_c28920	0.22	-2.3
3,033,458	+		PGA1_c28920	0.22	-1.3
3,033,507	-		PGA1_c28920	0.28	+1.5
3,033,513	-		PGA1_c28920	0.29	+1.1
3,033,513	-		PGA1_c28920	0.29	+1.5
3,033,538	+		PGA1_c28920	0.31	+1.8
3,033,561	+		PGA1_c28920	0.34	-1.1
3,033,569	+		PGA1_c28920	0.35	+0.8