Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28160

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,940,204	-		PGA1_c28140	0.37	-0.5
2,940,269	+		PGA1_c28140	0.43	+2.4
2,940,279	+		PGA1_c28140	0.44	-0.4
2,940,330	+		PGA1_c28140	0.48	-0.3
2,940,338	-		PGA1_c28140	0.49	-0.3
2,940,405	+		PGA1_c28140	0.55	+1.6
2,940,456	+		PGA1_c28140	0.60	+0.4
2,940,492	+		PGA1_c28140	0.63	+0.4
2,940,500	-		PGA1_c28140	0.64	+1.4
2,940,531	+		PGA1_c28140	0.67	-0.4
2,940,537	+		PGA1_c28140	0.68	+0.7
2,940,539	-		PGA1_c28140	0.68	+0.1
2,940,547	+		PGA1_c28140	0.69	-1.2
2,940,592	+		PGA1_c28140	0.73	-1.2
2,940,610	+		PGA1_c28140	0.74	+1.0
2,940,611	+		PGA1_c28140	0.74	+0.9
2,940,651	+		PGA1_c28140	0.78	-0.6
2,940,706	+		PGA1_c28140	0.83	+0.7
2,940,764	+		PGA1_c28140	0.89	+0.2
2,940,769	+		PGA1_c28140	0.89	-2.4
2,940,772	-		PGA1_c28140	0.89	-1.6
2,940,772	-		PGA1_c28140	0.89	-1.9
2,940,772	-		PGA1_c28140	0.89	+0.4
2,940,774	+		PGA1_c28140	0.89	+0.5
2,940,774	+		PGA1_c28140	0.89	-0.2
2,940,779	+				+1.5
2,940,787	-				-0.3
2,940,787	-				-0.1
2,940,800	+				-1.5
2,940,800	-				+0.0
2,940,860	+				-2.4
2,940,889	-				-0.9
2,940,920	+		PGA1_c28150	0.10	+0.9
2,940,920	+		PGA1_c28150	0.10	+0.4
2,940,920	+		PGA1_c28150	0.10	+0.5
2,940,920	+		PGA1_c28150	0.10	-1.2
2,940,928	-		PGA1_c28150	0.13	+0.3
2,940,928	-		PGA1_c28150	0.13	-1.0
2,940,928	-		PGA1_c28150	0.13	-1.6
2,940,928	-		PGA1_c28150	0.13	+0.2
2,940,932	+		PGA1_c28150	0.14	+2.1
2,940,932	+		PGA1_c28150	0.14	-0.9
2,940,932	+		PGA1_c28150	0.14	+2.2
2,940,932	+		PGA1_c28150	0.14	-0.5
2,940,940	-		PGA1_c28150	0.17	-0.6
2,940,940	-		PGA1_c28150	0.17	-2.9
2,940,940	-		PGA1_c28150	0.17	-0.8
2,940,973	-		PGA1_c28150	0.27	+1.0
2,941,012	+		PGA1_c28150	0.40	+0.8
2,941,030	-		PGA1_c28150	0.45	+0.8
2,941,038	-		PGA1_c28150	0.48	+0.2
2,941,100	+		PGA1_c28150	0.68	-0.7
2,941,116	+		PGA1_c28150	0.73	+0.4
2,941,134	+		PGA1_c28150	0.78	+0.4
2,941,140	+		PGA1_c28150	0.80	+0.6
2,941,150	+		PGA1_c28150	0.83	+0.8
2,941,150	-		PGA1_c28150	0.83	-0.2
2,941,158	-		PGA1_c28150	0.86	-0.9
2,941,160	-		PGA1_c28150	0.87	+0.4
2,941,170	+				-1.0
2,941,178	-				+0.6
2,941,178	-				+0.2
2,941,222	+				+2.6
2,941,240	-				-1.2
2,941,261	+				+0.0
2,941,269	-				-2.4
2,941,303	+		PGA1_c28160	0.11	+1.0
2,941,311	+		PGA1_c28160	0.12	-0.9
2,941,320	-		PGA1_c28160	0.13	-0.6
2,941,377	-		PGA1_c28160	0.19	+1.5
2,941,423	+		PGA1_c28160	0.24	+0.2
2,941,423	+		PGA1_c28160	0.24	-0.3
2,941,423	+		PGA1_c28160	0.24	-0.0
2,941,431	-		PGA1_c28160	0.25	-0.5
2,941,483	+		PGA1_c28160	0.30	+0.5
2,941,491	-		PGA1_c28160	0.31	-0.6
2,941,505	+		PGA1_c28160	0.33	+0.9
2,941,598	+		PGA1_c28160	0.43	+1.1
2,941,605	-		PGA1_c28160	0.44	+0.2
2,941,612	+		PGA1_c28160	0.44	+0.8
2,941,702	+		PGA1_c28160	0.54	+0.9
2,941,762	-		PGA1_c28160	0.61	+0.7
2,941,780	+		PGA1_c28160	0.63	+1.3
2,941,812	-		PGA1_c28160	0.66	+0.9
2,941,831	+		PGA1_c28160	0.68	+0.6
2,941,833	-		PGA1_c28160	0.68	+0.2
2,941,859	+		PGA1_c28160	0.71	+0.4
2,941,859	+		PGA1_c28160	0.71	-0.2
2,941,973	+		PGA1_c28160	0.84	-0.5
2,941,975	-		PGA1_c28160	0.84	-0.5
2,941,987	+		PGA1_c28160	0.85	+0.4
2,942,041	+				-0.5
2,942,049	-				+2.6
2,942,052	-				-0.0
2,942,070	+				+1.4
2,942,078	-				+0.4
2,942,078	-				-1.2
2,942,083	-				-0.6
2,942,130	-				+0.1
2,942,130	-				-0.0
2,942,153	+				+0.1
2,942,153	+				+1.4
2,942,153	+				+1.6
2,942,155	+				+1.0
2,942,158	+				+0.2
2,942,160	+				+0.3
2,942,161	-				-0.8
2,942,219	-				+0.1
2,942,221	+				+1.1
2,942,267	+				+0.4
2,942,342	-		PGA1_c28170	0.14	+1.4
2,942,424	-		PGA1_c28170	0.21	+0.1
2,942,556	-		PGA1_c28170	0.33	+1.6
2,942,568	+		PGA1_c28170	0.35	+0.1
2,942,607	+		PGA1_c28170	0.38	+0.4
2,942,607	+		PGA1_c28170	0.38	+0.8
2,942,607	+		PGA1_c28170	0.38	-1.9
2,942,607	+		PGA1_c28170	0.38	-0.9
2,942,607	+		PGA1_c28170	0.38	+1.0
2,942,607	+		PGA1_c28170	0.38	-1.4
2,942,607	+		PGA1_c28170	0.38	+2.7
2,942,607	+		PGA1_c28170	0.38	+0.8
2,942,607	+		PGA1_c28170	0.38	-0.5
2,942,607	+		PGA1_c28170	0.38	+1.0
2,942,612	+		PGA1_c28170	0.39	-0.6
2,942,615	-		PGA1_c28170	0.39	+0.9
2,942,615	-		PGA1_c28170	0.39	+0.3
2,942,615	-		PGA1_c28170	0.39	+1.8
2,942,615	-		PGA1_c28170	0.39	+0.6
2,942,615	-		PGA1_c28170	0.39	+0.6
2,942,615	-		PGA1_c28170	0.39	-0.4
2,942,615	-		PGA1_c28170	0.39	-0.4
2,942,615	-		PGA1_c28170	0.39	-1.0
2,942,741	+		PGA1_c28170	0.51	+2.7
2,942,810	-		PGA1_c28170	0.57	+1.2
2,942,885	+		PGA1_c28170	0.64	+0.6
2,942,885	+		PGA1_c28170	0.64	-0.1
2,942,885	+		PGA1_c28170	0.64	+1.1
2,942,886	+		PGA1_c28170	0.64	+0.8
2,942,893	-		PGA1_c28170	0.65	+2.8
2,942,893	-		PGA1_c28170	0.65	-0.3
2,942,901	-		PGA1_c28170	0.65	+1.0
2,942,901	-		PGA1_c28170	0.65	+0.5
2,942,901	-		PGA1_c28170	0.65	-0.3
2,942,901	-		PGA1_c28170	0.65	-1.5
2,942,967	-		PGA1_c28170	0.72	-2.2
2,942,986	+		PGA1_c28170	0.73	-1.3
2,943,040	-		PGA1_c28170	0.78	-0.8
2,943,078	-		PGA1_c28170	0.82	-0.0
2,943,115	+		PGA1_c28170	0.85	-1.3