Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22440

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,327,107	+		PGA1_c22430	0.18	-0.4
2,327,185	+		PGA1_c22430	0.24	+0.3
2,327,199	+		PGA1_c22430	0.25	+0.9
2,327,207	-		PGA1_c22430	0.26	-0.6
2,327,207	-		PGA1_c22430	0.26	-1.3
2,327,207	-		PGA1_c22430	0.26	-0.3
2,327,207	-		PGA1_c22430	0.26	+0.3
2,327,338	-		PGA1_c22430	0.37	-0.0
2,327,365	+		PGA1_c22430	0.39	+0.1
2,327,381	-		PGA1_c22430	0.40	+0.1
2,327,418	+		PGA1_c22430	0.43	-0.8
2,327,420	+		PGA1_c22430	0.43	+2.2
2,327,420	+		PGA1_c22430	0.43	-1.1
2,327,433	+		PGA1_c22430	0.44	+0.4
2,327,433	+		PGA1_c22430	0.44	-0.5
2,327,433	+		PGA1_c22430	0.44	+1.2
2,327,433	+		PGA1_c22430	0.44	-0.5
2,327,433	+		PGA1_c22430	0.44	-0.1
2,327,433	+		PGA1_c22430	0.44	+0.7
2,327,433	+		PGA1_c22430	0.44	-0.4
2,327,441	-		PGA1_c22430	0.45	+1.4
2,327,441	-		PGA1_c22430	0.45	-1.7
2,327,441	-		PGA1_c22430	0.45	+0.3
2,327,441	-		PGA1_c22430	0.45	-0.4
2,327,441	-		PGA1_c22430	0.45	+0.5
2,327,466	+		PGA1_c22430	0.47	-0.4
2,327,466	+		PGA1_c22430	0.47	-0.9
2,327,471	+		PGA1_c22430	0.48	-1.2
2,327,474	-		PGA1_c22430	0.48	-0.7
2,327,474	-		PGA1_c22430	0.48	+0.7
2,327,474	-		PGA1_c22430	0.48	-0.2
2,327,474	-		PGA1_c22430	0.48	+4.1
2,327,474	-		PGA1_c22430	0.48	+0.5
2,327,566	-		PGA1_c22430	0.55	-0.2
2,327,571	-		PGA1_c22430	0.56	-0.3
2,327,591	-		PGA1_c22430	0.58	-0.9
2,327,632	-		PGA1_c22430	0.61	+0.1
2,327,643	-		PGA1_c22430	0.62	+0.3
2,327,670	+		PGA1_c22430	0.64	-0.3
2,327,694	+		PGA1_c22430	0.66	-0.8
2,327,708	+		PGA1_c22430	0.67	-0.3
2,327,713	-		PGA1_c22430	0.68	+0.6
2,327,717	-		PGA1_c22430	0.68	-0.0
2,327,717	-		PGA1_c22430	0.68	+1.4
2,327,808	-		PGA1_c22430	0.75	+1.3
2,327,810	+		PGA1_c22430	0.76	-0.6
2,327,810	+		PGA1_c22430	0.76	+0.0
2,327,810	+		PGA1_c22430	0.76	-0.0
2,327,880	+		PGA1_c22430	0.81	+0.7
2,327,908	-		PGA1_c22430	0.84	-0.6
2,327,923	-		PGA1_c22430	0.85	-0.8
2,327,945	-		PGA1_c22430	0.87	-2.9
2,327,955	-		PGA1_c22430	0.88	-0.3
2,327,955	-		PGA1_c22430	0.88	-0.5
2,327,955	-		PGA1_c22430	0.88	+0.3
2,327,955	-		PGA1_c22430	0.88	-1.9
2,327,955	-		PGA1_c22430	0.88	-0.1
2,327,955	-		PGA1_c22430	0.88	-1.1
2,327,955	-		PGA1_c22430	0.88	-0.1
2,328,025	+				+0.1
2,328,025	-				+0.2
2,328,038	-				+0.4
2,328,069	+				-0.1
2,328,069	+				-0.4
2,328,069	+				+0.3
2,328,069	+				+0.4
2,328,072	+				+0.6
2,328,072	+				-1.3
2,328,072	+				+0.2
2,328,072	+				+0.8
2,328,077	-				+0.2
2,328,077	-				-0.5
2,328,080	-				+0.3
2,328,080	-				-1.1
2,328,082	-				-3.6
2,328,111	+				+0.3
2,328,112	+				-0.3
2,328,120	-				+0.0
2,328,120	-				-1.3
2,328,120	-				+0.8
2,328,167	-				-1.0
2,328,199	-				-1.5
2,328,240	+				-0.4
2,328,249	+				-0.9
2,328,253	-				+1.1
2,328,283	+		PGA1_c22440	0.10	-0.3
2,328,300	+		PGA1_c22440	0.11	+0.3
2,328,305	+		PGA1_c22440	0.12	-2.0
2,328,338	+		PGA1_c22440	0.13	+0.1
2,328,346	-		PGA1_c22440	0.14	-0.4
2,328,367	+		PGA1_c22440	0.15	+0.2
2,328,371	+		PGA1_c22440	0.15	+0.2
2,328,401	-		PGA1_c22440	0.17	-0.3
2,328,409	-		PGA1_c22440	0.17	-0.2
2,328,421	-		PGA1_c22440	0.18	+1.0
2,328,446	-		PGA1_c22440	0.20	-0.6
2,328,467	-		PGA1_c22440	0.21	-0.2
2,328,494	+		PGA1_c22440	0.22	-0.4
2,328,502	-		PGA1_c22440	0.23	-1.3
2,328,502	-		PGA1_c22440	0.23	+0.2
2,328,505	+		PGA1_c22440	0.23	+1.8
2,328,507	-		PGA1_c22440	0.23	-0.3
2,328,513	-		PGA1_c22440	0.23	+0.5
2,328,513	-		PGA1_c22440	0.23	-2.5
2,328,513	-		PGA1_c22440	0.23	-1.4
2,328,513	-		PGA1_c22440	0.23	-0.4
2,328,586	+		PGA1_c22440	0.27	-0.7
2,328,586	+		PGA1_c22440	0.27	-3.9
2,328,594	-		PGA1_c22440	0.28	-0.1
2,328,707	+		PGA1_c22440	0.34	-1.2
2,328,725	+		PGA1_c22440	0.35	+1.3
2,328,735	+		PGA1_c22440	0.36	+0.6
2,328,735	+		PGA1_c22440	0.36	+0.3
2,328,743	-		PGA1_c22440	0.36	-1.7
2,328,743	-		PGA1_c22440	0.36	-0.5
2,328,758	-		PGA1_c22440	0.37	+0.4
2,328,782	+		PGA1_c22440	0.39	+0.8
2,328,790	-		PGA1_c22440	0.39	-1.8
2,328,797	+		PGA1_c22440	0.39	-0.9
2,328,802	-		PGA1_c22440	0.40	-0.0
2,328,937	-		PGA1_c22440	0.47	-0.6
2,328,958	+		PGA1_c22440	0.49	-0.6
2,328,982	+		PGA1_c22440	0.50	-1.4
2,329,007	-		PGA1_c22440	0.51	+1.0
2,329,017	+		PGA1_c22440	0.52	-0.8
2,329,080	-		PGA1_c22440	0.55	+0.3
2,329,090	-		PGA1_c22440	0.56	-2.5
2,329,104	+		PGA1_c22440	0.57	-1.5
2,329,104	+		PGA1_c22440	0.57	-1.2
2,329,112	-		PGA1_c22440	0.57	+1.3
2,329,112	-		PGA1_c22440	0.57	-1.8
2,329,112	-		PGA1_c22440	0.57	+0.1
2,329,112	-		PGA1_c22440	0.57	-0.9
2,329,112	-		PGA1_c22440	0.57	-0.9
2,329,112	-		PGA1_c22440	0.57	-0.3
2,329,151	+		PGA1_c22440	0.59	+0.0
2,329,267	+		PGA1_c22440	0.66	-0.1
2,329,294	+		PGA1_c22440	0.68	+0.4
2,329,335	+		PGA1_c22440	0.70	+0.4
2,329,434	-		PGA1_c22440	0.76	-0.4
2,329,434	-		PGA1_c22440	0.76	-2.7
2,329,451	-		PGA1_c22440	0.76	-0.3
2,329,472	+		PGA1_c22440	0.78	-0.1
2,329,490	-		PGA1_c22440	0.79	-1.6
2,329,517	+		PGA1_c22440	0.80	-1.3
2,329,520	+		PGA1_c22440	0.80	-0.4
2,329,521	+		PGA1_c22440	0.80	-0.5
2,329,525	-		PGA1_c22440	0.81	-0.6
2,329,525	-		PGA1_c22440	0.81	-1.0
2,329,529	-		PGA1_c22440	0.81	-0.5
2,329,529	-		PGA1_c22440	0.81	-0.1
2,329,539	-		PGA1_c22440	0.81	-1.8
2,329,539	-		PGA1_c22440	0.81	-1.5
2,329,539	-		PGA1_c22440	0.81	-0.3
2,329,597	+		PGA1_c22440	0.85	-0.5
2,329,605	-		PGA1_c22440	0.85	-1.1
2,329,605	-		PGA1_c22440	0.85	+0.1
2,329,613	-		PGA1_c22440	0.86	-0.8
2,329,638	+		PGA1_c22440	0.87	+0.4
2,329,642	+		PGA1_c22440	0.87	+0.2
2,329,642	+		PGA1_c22440	0.87	+1.2
2,329,650	-		PGA1_c22440	0.88	-0.7
2,329,675	+		PGA1_c22440	0.89	-0.1
2,329,677	+		PGA1_c22440	0.89	-2.3
2,329,677	+		PGA1_c22440	0.89	+0.8
2,329,677	+		PGA1_c22440	0.89	-0.7
2,329,677	+		PGA1_c22440	0.89	+1.3
2,329,682	+		PGA1_c22440	0.90	-0.3
2,329,685	-		PGA1_c22440	0.90	+1.6
2,329,685	-		PGA1_c22440	0.90	-2.1
2,329,685	-		PGA1_c22440	0.90	+1.6
2,329,685	-		PGA1_c22440	0.90	+0.6
2,329,718	+				+1.5
2,329,742	-				+0.6
2,329,752	-				+0.4
2,329,787	+				-1.3
2,329,909	+				-0.3
2,329,946	-		PGA1_c22450	0.18	+0.9
2,329,983	-		PGA1_c22450	0.26	-1.6
2,329,993	-		PGA1_c22450	0.28	+0.8
2,329,993	-		PGA1_c22450	0.28	+0.3
2,330,008	-		PGA1_c22450	0.31	+0.1
2,330,008	-		PGA1_c22450	0.31	-1.0
2,330,074	+		PGA1_c22450	0.46	+0.5
2,330,101	+		PGA1_c22450	0.51	-0.6
2,330,101	+		PGA1_c22450	0.51	+0.6
2,330,101	+		PGA1_c22450	0.51	-1.1
2,330,109	-		PGA1_c22450	0.53	-0.6
2,330,109	-		PGA1_c22450	0.53	+0.3
2,330,109	-		PGA1_c22450	0.53	+0.5
2,330,109	-		PGA1_c22450	0.53	-0.5
2,330,109	-		PGA1_c22450	0.53	-1.3
2,330,109	-		PGA1_c22450	0.53	-0.5
2,330,109	-		PGA1_c22450	0.53	-1.3
2,330,109	-		PGA1_c22450	0.53	+0.4
2,330,146	-		PGA1_c22450	0.61	+0.3
2,330,155	+		PGA1_c22450	0.63	-0.5
2,330,155	+		PGA1_c22450	0.63	+1.0
2,330,163	-		PGA1_c22450	0.65	+0.3
2,330,195	+		PGA1_c22450	0.72	+0.7
2,330,209	+		PGA1_c22450	0.75	-0.6
2,330,222	-		PGA1_c22450	0.78	+0.6
2,330,245	+		PGA1_c22450	0.83	-0.6
2,330,303	+				-0.3
2,330,313	+				+1.4
2,330,313	+				+0.7
2,330,321	-				-2.3
2,330,321	-				+0.1
2,330,326	-				-1.6
2,330,378	+				+0.0
2,330,386	-				+0.6
2,330,386	-				-0.1
2,330,387	-				-1.3
2,330,406	+				-1.7
2,330,412	-				+0.0
2,330,418	-				-0.1
2,330,425	+				-0.5
2,330,425	+				-0.5
2,330,451	+				-0.3
2,330,489	-				-2.1
2,330,491	+				+0.3
2,330,499	-				+0.5
2,330,521	+				-1.2
2,330,555	-				-3.5
2,330,561	+				-0.2
2,330,569	-				-0.1
2,330,569	-				-0.9
2,330,569	-				-1.9
2,330,569	-				+1.0
2,330,638	-				-1.3
2,330,643	-				-0.9
2,330,654	+				+0.0
2,330,663	-				+0.9
2,330,730	+				+1.3
2,330,761	+				+0.8
2,330,761	+				-0.2
2,330,761	+				-0.7
2,330,769	-				+0.5
2,330,779	-				-0.7