Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22020

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,281,055	-		PGA1_c22000	0.39	-1.1
2,281,055	-		PGA1_c22000	0.39	-0.4
2,281,091	+		PGA1_c22000	0.44	+0.2
2,281,091	+		PGA1_c22000	0.44	+0.3
2,281,091	+		PGA1_c22000	0.44	+1.3
2,281,091	+		PGA1_c22000	0.44	-0.9
2,281,099	-		PGA1_c22000	0.46	+0.5
2,281,099	-		PGA1_c22000	0.46	+1.5
2,281,099	-		PGA1_c22000	0.46	+2.0
2,281,115	+		PGA1_c22000	0.48	-0.3
2,281,273	+		PGA1_c22000	0.74	-0.5
2,281,273	+		PGA1_c22000	0.74	+0.7
2,281,273	+		PGA1_c22000	0.74	-1.9
2,281,273	+		PGA1_c22000	0.74	+0.3
2,281,273	+		PGA1_c22000	0.74	+0.7
2,281,273	+		PGA1_c22000	0.74	-0.7
2,281,273	+		PGA1_c22000	0.74	-1.4
2,281,273	+		PGA1_c22000	0.74	+2.5
2,281,273	+		PGA1_c22000	0.74	+1.1
2,281,273	+		PGA1_c22000	0.74	+1.4
2,281,281	-		PGA1_c22000	0.75	-0.3
2,281,281	-		PGA1_c22000	0.75	+0.0
2,281,281	-		PGA1_c22000	0.75	-0.1
2,281,281	-		PGA1_c22000	0.75	-1.8
2,281,281	-		PGA1_c22000	0.75	-1.7
2,281,281	-		PGA1_c22000	0.75	-1.5
2,281,281	-		PGA1_c22000	0.75	-0.5
2,281,298	+		PGA1_c22000	0.78	-1.7
2,281,372	-		PGA1_c22000	0.89	-0.0
2,281,475	+				+0.3
2,281,523	-				+2.3
2,281,523	-				-1.7
2,281,970	+				+0.7
2,281,974	+				-0.5
2,281,985	+				-2.0
2,282,022	+				+0.8
2,282,080	+				-2.3
2,282,093	-				-2.3
2,282,161	+				-2.5
2,282,267	+		PGA1_c22020	0.17	+1.5
2,282,297	-		PGA1_c22020	0.20	+1.0
2,282,348	-		PGA1_c22020	0.24	-0.0
2,282,374	+		PGA1_c22020	0.25	-0.1
2,282,382	-		PGA1_c22020	0.26	+0.3
2,282,389	-		PGA1_c22020	0.27	-0.4
2,282,550	-		PGA1_c22020	0.39	-1.7
2,282,550	-		PGA1_c22020	0.39	+1.6
2,282,589	+		PGA1_c22020	0.42	+1.3
2,282,693	-		PGA1_c22020	0.50	+0.8
2,282,711	-		PGA1_c22020	0.51	+0.5
2,282,788	+		PGA1_c22020	0.57	+0.5
2,282,837	+		PGA1_c22020	0.60	+1.8
2,282,860	+		PGA1_c22020	0.62	+0.1
2,282,874	-		PGA1_c22020	0.63	+1.3
2,282,938	+		PGA1_c22020	0.68	-0.5
2,282,939	+		PGA1_c22020	0.68	+0.7
2,283,122	+		PGA1_c22020	0.82	+2.0
2,283,178	-		PGA1_c22020	0.86	-1.5
2,283,198	+		PGA1_c22020	0.88	-0.2
2,283,206	-		PGA1_c22020	0.88	-0.9
2,283,307	+				-1.7
2,283,355	+				+0.6
2,283,355	+				+0.6
2,283,542	+				-0.3
2,283,542	+				-0.1
2,283,550	+				-0.2
2,283,580	+				+0.4
2,283,580	+				+0.2
2,283,588	-				-0.3
2,283,619	+				+0.5
2,283,622	-				+0.3
2,283,658	+		PGA1_c22030	0.12	+0.0
2,283,675	+		PGA1_c22030	0.13	+0.5
2,283,705	+		PGA1_c22030	0.17	-1.3
2,283,813	+		PGA1_c22030	0.28	-0.4
2,283,893	+		PGA1_c22030	0.37	+1.6
2,283,901	-		PGA1_c22030	0.38	-0.7
2,283,901	-		PGA1_c22030	0.38	+0.3
2,283,956	+		PGA1_c22030	0.44	-0.3
2,283,956	+		PGA1_c22030	0.44	-0.2
2,284,106	-		PGA1_c22030	0.60	+0.8
2,284,149	+		PGA1_c22030	0.65	-0.2
2,284,181	+		PGA1_c22030	0.69	-0.5
2,284,210	-		PGA1_c22030	0.72	+2.0
2,284,226	+		PGA1_c22030	0.73	+0.9
2,284,284	+		PGA1_c22030	0.80	-1.8
2,284,352	+		PGA1_c22030	0.87	-2.9