Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19680

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,042,349	+		PGA1_c19670	0.53	-0.7
2,042,420	-		PGA1_c19670	0.58	-1.7
2,042,425	+		PGA1_c19670	0.58	+0.4
2,042,511	+		PGA1_c19670	0.64	-0.3
2,042,586	-		PGA1_c19670	0.70	-0.2
2,042,589	+		PGA1_c19670	0.70	+0.6
2,042,737	+		PGA1_c19670	0.80	+0.6
2,042,826	-		PGA1_c19670	0.86	-1.3
2,042,860	+		PGA1_c19670	0.89	+0.8
2,042,868	-		PGA1_c19670	0.89	-0.2
2,042,868	-		PGA1_c19670	0.89	-1.2
2,042,875	+		PGA1_c19670	0.90	+2.3
2,042,875	+		PGA1_c19670	0.90	-0.4
2,042,883	-				+1.6
2,042,910	+				-1.1
2,042,993	+				-2.3
2,043,001	-				+0.1
2,043,050	+				+1.3
2,043,058	-				-1.3
2,043,087	+				+2.8
2,043,087	+				+0.3
2,043,087	+				+0.5
2,043,095	-				-0.1
2,043,095	-				-0.0
2,043,114	-				-0.1
2,043,118	+				-0.7
2,043,131	-				-0.0
2,043,167	-				+0.7
2,043,179	+				-1.3
2,043,179	+				+0.3
2,043,179	+				+0.8
2,043,187	-				-0.6
2,043,187	-				-0.1
2,043,240	-				+0.5
2,043,242	+				+0.2
2,043,247	+				+0.7
2,043,250	-				+0.3
2,043,253	+				+0.3
2,043,258	+				-1.8
2,043,273	+				-0.3
2,043,291	+				-2.3
2,043,356	+				-0.3
2,043,364	-				+0.1
2,043,514	-		PGA1_c19680	0.29	+0.3
2,043,551	+		PGA1_c19680	0.35	-2.7
2,043,558	+		PGA1_c19680	0.36	-3.2
2,043,559	-		PGA1_c19680	0.36	+0.2
2,043,566	-		PGA1_c19680	0.37	-0.3
2,043,581	-		PGA1_c19680	0.39	+1.7
2,043,612	+		PGA1_c19680	0.44	-0.7
2,043,774	+		PGA1_c19680	0.68	-0.8
2,043,793	-		PGA1_c19680	0.71	-0.7
2,043,805	+		PGA1_c19680	0.73	-1.1
2,043,842	-		PGA1_c19680	0.78	-0.3
2,043,854	+		PGA1_c19680	0.80	+0.5
2,043,854	+		PGA1_c19680	0.80	-0.7
2,043,862	-		PGA1_c19680	0.81	-0.4
2,043,867	+		PGA1_c19680	0.82	-1.3
2,043,873	+		PGA1_c19680	0.83	+0.3
2,043,920	-				-0.9
2,043,987	-				+0.1
2,044,067	+				+1.1
2,044,147	+		PGA1_c19690	0.23	-3.1
2,044,147	+		PGA1_c19690	0.23	+0.4
2,044,152	+		PGA1_c19690	0.25	-0.3
2,044,154	+		PGA1_c19690	0.26	+2.1
2,044,155	-		PGA1_c19690	0.27	+0.2
2,044,155	-		PGA1_c19690	0.27	-2.6
2,044,155	-		PGA1_c19690	0.27	+0.2
2,044,217	-		PGA1_c19690	0.56	+0.1
2,044,233	-		PGA1_c19690	0.63	+0.9
2,044,256	+		PGA1_c19690	0.74	-0.2
2,044,342	-				+0.2
2,044,385	-				+3.1
2,044,395	+				-0.5
2,044,395	+				-0.4
2,044,403	-				-1.1
2,044,413	-				+0.4
2,044,435	-				+1.0
2,044,441	+				+0.6
2,044,441	+				+0.4
2,044,444	-				-0.8
2,044,449	-				-0.1
2,044,449	-				-0.5
2,044,449	-				-2.0
2,044,449	-				-0.4
2,044,449	-				+0.9
2,044,449	-				-0.2
2,044,462	+				+0.6
2,044,470	-				+0.3
2,044,480	+				+1.1
2,044,490	+				-0.8
2,044,495	+				+1.2
2,044,702	-		PGA1_c19700	0.15	-1.2
2,044,846	+		PGA1_c19700	0.24	-0.6
2,044,862	+		PGA1_c19700	0.25	+0.2
2,044,895	-		PGA1_c19700	0.26	-0.2
2,044,905	+		PGA1_c19700	0.27	-3.6
2,044,910	+		PGA1_c19700	0.27	+0.7
2,044,910	+		PGA1_c19700	0.27	-0.1
2,044,913	-		PGA1_c19700	0.27	-1.1
2,044,918	-		PGA1_c19700	0.28	-0.4
2,044,918	-		PGA1_c19700	0.28	-0.5
2,044,919	+		PGA1_c19700	0.28	-0.4
2,044,919	+		PGA1_c19700	0.28	+0.6
2,044,927	-				+0.2