Strain Fitness in Shewanella amazonensis SB2B around Sama_3036

Experiment: Tween 20

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20
3,610,772	+				+0.4
3,610,772	+				-1.8
3,610,772	+				-0.9
3,610,773	-				+0.4
3,610,784	+				-0.8
3,610,852	+		Sama_3035	0.13	+0.4
3,610,936	+		Sama_3035	0.22	-1.5
3,610,936	+		Sama_3035	0.22	-1.9
3,610,937	-		Sama_3035	0.22	-2.1
3,610,988	-		Sama_3035	0.28	-1.7
3,610,988	-		Sama_3035	0.28	-1.1
3,610,998	+		Sama_3035	0.29	-0.6
3,610,999	-		Sama_3035	0.29	-1.4
3,611,021	+		Sama_3035	0.32	-0.2
3,611,066	+		Sama_3035	0.37	-1.6
3,611,066	+		Sama_3035	0.37	-0.9
3,611,067	-		Sama_3035	0.37	-0.3
3,611,067	-		Sama_3035	0.37	-1.9
3,611,126	+		Sama_3035	0.44	-3.2
3,611,126	+		Sama_3035	0.44	-1.9
3,611,148	+		Sama_3035	0.46	-0.3
3,611,149	-		Sama_3035	0.46	-1.6
3,611,175	+		Sama_3035	0.49	-0.0
3,611,175	+		Sama_3035	0.49	-2.0
3,611,176	-		Sama_3035	0.49	-1.1
3,611,176	-		Sama_3035	0.49	-1.6
3,611,178	+		Sama_3035	0.50	-1.1
3,611,178	+		Sama_3035	0.50	-0.3
3,611,178	+		Sama_3035	0.50	-2.3
3,611,179	-		Sama_3035	0.50	-0.8
3,611,179	-		Sama_3035	0.50	-2.7
3,611,261	-		Sama_3035	0.59	-0.5
3,611,284	+		Sama_3035	0.62	-1.3
3,611,284	+		Sama_3035	0.62	-1.7
3,611,284	+		Sama_3035	0.62	-2.1
3,611,285	-		Sama_3035	0.62	+1.3
3,611,285	-		Sama_3035	0.62	+0.1
3,611,285	-		Sama_3035	0.62	-0.9
3,611,285	-		Sama_3035	0.62	-1.4
3,611,285	-		Sama_3035	0.62	-0.6
3,611,345	+		Sama_3035	0.68	-0.6
3,611,345	+		Sama_3035	0.68	-1.4
3,611,345	+		Sama_3035	0.68	-0.1
3,611,346	-		Sama_3035	0.69	-1.6
3,611,435	+		Sama_3035	0.79	-0.9
3,611,436	-		Sama_3035	0.79	-0.9
3,611,479	+		Sama_3035	0.84	-0.9
3,611,480	-		Sama_3035	0.84	-1.0
3,611,537	+				+0.7
3,611,537	+				-0.6
3,611,538	-				+0.2
3,611,538	-				-1.2
3,611,538	-				+0.1
3,611,538	-				-0.3
3,611,538	-				-1.1
3,611,555	+				-1.5
3,611,569	+				-1.5
3,611,570	-				-1.9
3,611,615	+				-1.1
3,611,616	-				-1.1
3,611,616	-				-0.7
3,611,625	+				-1.5
3,611,625	+				+0.7
3,611,625	+				-1.4
3,611,625	+				+0.1
3,611,625	+				+0.2
3,611,625	+				-0.2
3,611,626	-				+0.0
3,611,626	-				+0.6
3,611,626	-				+0.5
3,611,648	-				+0.8
3,611,648	-				+0.2
3,611,873	+				+0.4
3,611,996	+		Sama_3036	0.11	-0.8
3,611,996	+		Sama_3036	0.11	-1.1
3,611,996	+		Sama_3036	0.11	+1.0
3,611,997	-		Sama_3036	0.11	-0.2
3,611,997	-		Sama_3036	0.11	+0.3
3,611,997	-		Sama_3036	0.11	+0.9
3,611,997	-		Sama_3036	0.11	-0.8
3,612,000	+		Sama_3036	0.11	-1.1
3,612,000	+		Sama_3036	0.11	+0.4
3,612,000	+		Sama_3036	0.11	-0.1
3,612,000	+		Sama_3036	0.11	+2.3
3,612,000	+		Sama_3036	0.11	+0.7
3,612,000	+		Sama_3036	0.11	-0.4
3,612,001	-		Sama_3036	0.11	+0.4
3,612,001	-		Sama_3036	0.11	+0.5
3,612,015	+		Sama_3036	0.11	-1.5
3,612,016	-		Sama_3036	0.11	-1.8
3,612,016	-		Sama_3036	0.11	-0.2
3,612,039	+		Sama_3036	0.12	+0.4
3,612,040	-		Sama_3036	0.12	-0.3
3,612,040	-		Sama_3036	0.12	-0.1
3,612,040	-		Sama_3036	0.12	+0.3
3,612,040	-		Sama_3036	0.12	+1.2
3,612,052	+		Sama_3036	0.12	-0.0
3,612,052	+		Sama_3036	0.12	+2.3
3,612,052	+		Sama_3036	0.12	-0.6
3,612,053	-		Sama_3036	0.12	-1.2
3,612,053	-		Sama_3036	0.12	+0.7
3,612,053	-		Sama_3036	0.12	+0.9
3,612,053	-		Sama_3036	0.12	+0.9
3,612,070	+		Sama_3036	0.13	+0.6
3,612,070	+		Sama_3036	0.13	+1.7
3,612,185	+		Sama_3036	0.16	-1.2
3,612,188	+		Sama_3036	0.17	-0.7
3,612,188	+		Sama_3036	0.17	+0.1
3,612,188	+		Sama_3036	0.17	+0.3
3,612,189	-		Sama_3036	0.17	+1.0
3,612,241	+		Sama_3036	0.18	+0.1
3,612,241	+		Sama_3036	0.18	-1.0
3,612,241	+		Sama_3036	0.18	+0.7
3,612,242	-		Sama_3036	0.18	+0.1
3,612,242	-		Sama_3036	0.18	-0.3
3,612,242	-		Sama_3036	0.18	+1.2
3,612,243	+		Sama_3036	0.18	+0.3
3,612,243	+		Sama_3036	0.18	+0.2
3,612,243	+		Sama_3036	0.18	+0.8
3,612,243	+		Sama_3036	0.18	+0.6
3,612,244	-		Sama_3036	0.18	-0.8
3,612,244	-		Sama_3036	0.18	+1.1
3,612,244	-		Sama_3036	0.18	-0.4
3,612,244	-		Sama_3036	0.18	-0.1
3,612,274	-		Sama_3036	0.19	-0.1
3,612,274	-		Sama_3036	0.19	+0.7
3,612,274	-		Sama_3036	0.19	-2.3
3,612,328	+		Sama_3036	0.21	-1.5
3,612,349	+		Sama_3036	0.22	-0.1
3,612,471	+		Sama_3036	0.25	+0.4
3,612,471	+		Sama_3036	0.25	+1.3
3,612,472	-		Sama_3036	0.25	+0.7
3,612,472	-		Sama_3036	0.25	-0.0
3,612,598	-		Sama_3036	0.29	+0.7
3,612,642	+		Sama_3036	0.31	+0.0
3,612,703	+		Sama_3036	0.32	-0.3
3,612,734	+		Sama_3036	0.33	-1.7
3,612,735	-		Sama_3036	0.33	-0.5
3,612,749	+		Sama_3036	0.34	+0.4
3,612,749	+		Sama_3036	0.34	+1.2
3,612,750	-		Sama_3036	0.34	-0.7
3,612,750	-		Sama_3036	0.34	+0.1
3,612,750	-		Sama_3036	0.34	+1.7
3,612,778	-		Sama_3036	0.35	-0.2
3,612,778	-		Sama_3036	0.35	+0.2
3,612,863	+		Sama_3036	0.37	+0.9
3,612,863	+		Sama_3036	0.37	-0.9
3,612,863	+		Sama_3036	0.37	+0.8
3,612,863	+		Sama_3036	0.37	-1.3
3,612,863	+		Sama_3036	0.37	+1.3
3,612,864	-		Sama_3036	0.37	+0.1
3,612,864	-		Sama_3036	0.37	-0.5
3,612,864	-		Sama_3036	0.37	-0.9
3,612,864	-		Sama_3036	0.37	+0.5
3,612,864	-		Sama_3036	0.37	+0.8
3,612,864	-		Sama_3036	0.37	-0.3
3,612,864	-		Sama_3036	0.37	+0.4
3,613,025	+		Sama_3036	0.42	+0.6
3,613,047	+		Sama_3036	0.43	+0.3
3,613,080	+		Sama_3036	0.44	-0.5
3,613,081	-		Sama_3036	0.44	-1.0
3,613,081	-		Sama_3036	0.44	-0.2
3,613,081	-		Sama_3036	0.44	+1.2
3,613,081	-		Sama_3036	0.44	+0.4
3,613,081	-		Sama_3036	0.44	-1.1
3,613,081	-		Sama_3036	0.44	+1.4
3,613,154	+		Sama_3036	0.46	+3.0
3,613,155	-		Sama_3036	0.46	+0.7
3,613,188	-		Sama_3036	0.47	+0.9
3,613,240	+		Sama_3036	0.49	+0.1
3,613,240	+		Sama_3036	0.49	+0.7
3,613,240	+		Sama_3036	0.49	+0.1
3,613,240	+		Sama_3036	0.49	-0.9
3,613,240	+		Sama_3036	0.49	-1.1
3,613,241	-		Sama_3036	0.49	+0.4
3,613,241	-		Sama_3036	0.49	-0.6
3,613,247	+		Sama_3036	0.49	+0.4
3,613,247	+		Sama_3036	0.49	+0.5
3,613,247	+		Sama_3036	0.49	+1.3
3,613,298	+		Sama_3036	0.51	+0.5
3,613,316	-		Sama_3036	0.51	+1.0
3,613,331	-		Sama_3036	0.52	+0.4
3,613,350	+		Sama_3036	0.52	+1.0
3,613,377	+		Sama_3036	0.53	-2.3
3,613,390	+		Sama_3036	0.54	+0.3
3,613,390	+		Sama_3036	0.54	+0.7
3,613,390	+		Sama_3036	0.54	+0.6
3,613,390	+		Sama_3036	0.54	-0.5
3,613,390	+		Sama_3036	0.54	-0.3
3,613,390	+		Sama_3036	0.54	-0.1
3,613,390	+		Sama_3036	0.54	+0.1
3,613,390	+		Sama_3036	0.54	+1.1
3,613,391	-		Sama_3036	0.54	+0.2
3,613,391	-		Sama_3036	0.54	+0.0
3,613,391	-		Sama_3036	0.54	+1.3
3,613,403	-		Sama_3036	0.54	+1.0
3,613,440	+		Sama_3036	0.55	-0.6
3,613,441	-		Sama_3036	0.55	+0.2
3,613,504	+		Sama_3036	0.57	-1.1
3,613,504	+		Sama_3036	0.57	+0.2
3,613,566	-		Sama_3036	0.59	+0.3
3,613,621	-		Sama_3036	0.61	-1.7
3,613,649	-		Sama_3036	0.62	+0.4
3,613,654	+		Sama_3036	0.62	-0.1
3,613,655	-		Sama_3036	0.62	-1.0
3,613,679	+		Sama_3036	0.63	+0.1
3,613,699	+		Sama_3036	0.63	+0.5
3,613,699	+		Sama_3036	0.63	+2.0
3,613,699	+		Sama_3036	0.63	+1.0
3,613,699	+		Sama_3036	0.63	-0.6
3,613,699	+		Sama_3036	0.63	+0.1
3,613,699	+		Sama_3036	0.63	-0.9
3,613,699	+		Sama_3036	0.63	+0.7
3,613,700	-		Sama_3036	0.63	-1.6
3,613,700	-		Sama_3036	0.63	-1.3
3,613,700	-		Sama_3036	0.63	-0.3
3,613,700	-		Sama_3036	0.63	+0.4
3,613,716	+		Sama_3036	0.64	-0.3
3,613,716	+		Sama_3036	0.64	-0.0
3,613,716	+		Sama_3036	0.64	-0.4
3,613,751	+		Sama_3036	0.65	-0.5
3,613,751	+		Sama_3036	0.65	+0.7
3,613,752	-		Sama_3036	0.65	-1.1
3,613,752	-		Sama_3036	0.65	-0.1
3,613,752	-		Sama_3036	0.65	+0.0
3,613,759	+		Sama_3036	0.65	-0.8
3,613,759	+		Sama_3036	0.65	-1.0
3,613,759	+		Sama_3036	0.65	+0.9
3,613,760	-		Sama_3036	0.65	-0.1
3,613,760	-		Sama_3036	0.65	-0.7
3,613,860	+		Sama_3036	0.68	+0.7
3,613,883	+		Sama_3036	0.69	-3.0
3,613,883	+		Sama_3036	0.69	-1.5
3,613,884	-		Sama_3036	0.69	+0.6
3,613,884	-		Sama_3036	0.69	+0.6
3,613,900	-		Sama_3036	0.69	-0.1
3,613,900	-		Sama_3036	0.69	+0.2
3,613,956	+		Sama_3036	0.71	-0.5
3,614,044	+		Sama_3036	0.74	-0.4
3,614,054	-		Sama_3036	0.74	+0.1
3,614,083	+		Sama_3036	0.75	+0.3
3,614,113	+		Sama_3036	0.76	-0.3
3,614,113	+		Sama_3036	0.76	-0.1
3,614,113	+		Sama_3036	0.76	+0.5
3,614,113	+		Sama_3036	0.76	+0.9
3,614,113	+		Sama_3036	0.76	+0.5
3,614,113	+		Sama_3036	0.76	+0.9
3,614,113	+		Sama_3036	0.76	+1.7
3,614,113	+		Sama_3036	0.76	-1.1
3,614,113	+		Sama_3036	0.76	-0.4
3,614,114	-		Sama_3036	0.76	+0.4
3,614,114	-		Sama_3036	0.76	+0.5
3,614,114	-		Sama_3036	0.76	-0.3
3,614,114	-		Sama_3036	0.76	-0.9
3,614,114	-		Sama_3036	0.76	+0.1
3,614,114	-		Sama_3036	0.76	-1.1
3,614,114	-		Sama_3036	0.76	-0.4
3,614,137	-		Sama_3036	0.77	+0.7
3,614,137	-		Sama_3036	0.77	+1.3
3,614,190	+		Sama_3036	0.78	-0.1
3,614,191	-		Sama_3036	0.78	-1.8
3,614,191	-		Sama_3036	0.78	-2.3
3,614,215	+		Sama_3036	0.79	-1.2
3,614,216	-		Sama_3036	0.79	-1.9
3,614,295	+		Sama_3036	0.82	-2.6
3,614,295	+		Sama_3036	0.82	+1.1
3,614,295	+		Sama_3036	0.82	+0.5
3,614,295	+		Sama_3036	0.82	+1.7
3,614,296	-		Sama_3036	0.82	+0.5
3,614,363	-		Sama_3036	0.84	-1.3
3,614,379	+		Sama_3036	0.84	-0.5
3,614,379	+		Sama_3036	0.84	+0.0
3,614,380	-		Sama_3036	0.84	-0.6
3,614,380	-		Sama_3036	0.84	+0.0
3,614,380	-		Sama_3036	0.84	+1.0
3,614,401	+		Sama_3036	0.85	-1.2
3,614,475	+		Sama_3036	0.87	+0.8
3,614,475	+		Sama_3036	0.87	+0.7
3,614,475	+		Sama_3036	0.87	-0.4
3,614,475	+		Sama_3036	0.87	+0.0
3,614,475	+		Sama_3036	0.87	-1.4
3,614,475	+		Sama_3036	0.87	-0.5
3,614,475	+		Sama_3036	0.87	-0.4
3,614,475	+		Sama_3036	0.87	+0.1
3,614,475	+		Sama_3036	0.87	+0.7
3,614,475	+		Sama_3036	0.87	-0.9
3,614,475	+		Sama_3036	0.87	-0.2
3,614,475	+		Sama_3036	0.87	+0.1
3,614,475	+		Sama_3036	0.87	+1.0
3,614,476	-		Sama_3036	0.87	-0.6
3,614,476	-		Sama_3036	0.87	-0.3
3,614,476	-		Sama_3036	0.87	-0.3
3,614,476	-		Sama_3036	0.87	-0.1
3,614,476	-		Sama_3036	0.87	+0.1
3,614,476	-		Sama_3036	0.87	-0.3
3,614,476	-		Sama_3036	0.87	+1.4
3,614,476	-		Sama_3036	0.87	-1.1
3,614,476	-		Sama_3036	0.87	-1.0
3,614,476	-		Sama_3036	0.87	+0.4
3,614,476	-		Sama_3036	0.87	-0.3
3,614,476	-		Sama_3036	0.87	+1.0
3,614,476	-		Sama_3036	0.87	+1.2
3,614,476	-		Sama_3036	0.87	+0.4
3,614,497	+		Sama_3036	0.88	+0.5
3,614,497	+		Sama_3036	0.88	+0.3
3,614,509	+		Sama_3036	0.88	+0.1
3,614,714	+				+0.6
3,614,714	+				+0.1
3,614,721	+				-0.4
3,614,721	+				-0.2
3,614,721	+				-1.5
3,614,721	+				-0.3
3,614,721	+				+0.9
3,614,722	-				+0.4
3,614,722	-				+0.9
3,614,722	-				-0.5
3,614,722	-				+1.0
3,614,729	+				+0.2
3,614,729	+				+0.0
3,614,729	+				+0.7
3,614,730	-				+0.1
3,614,730	-				+1.1
3,614,730	-				+0.2
3,614,730	-				+0.2
3,614,782	+				-0.7
3,614,783	-				+0.9
3,614,783	-				+0.5
3,614,783	-				-1.2
3,614,783	-				+1.7
3,614,783	-				+0.8
3,614,783	-				+0.7
3,614,788	+				+0.4
3,614,822	+				-0.5
3,614,941	+				-0.9
3,615,018	+		Sama_3037	0.15	+0.2
3,615,019	-		Sama_3037	0.15	-0.3
3,615,035	+		Sama_3037	0.18	-0.2
3,615,035	+		Sama_3037	0.18	-0.5
3,615,035	+		Sama_3037	0.18	-0.6
3,615,035	+		Sama_3037	0.18	-0.0
3,615,035	+		Sama_3037	0.18	+0.7
3,615,036	-		Sama_3037	0.18	-1.1
3,615,041	+		Sama_3037	0.18	-0.3
3,615,041	+		Sama_3037	0.18	+1.1
3,615,041	+		Sama_3037	0.18	-0.6
3,615,042	-		Sama_3037	0.19	-2.1
3,615,188	+		Sama_3037	0.39	+0.4
3,615,189	-		Sama_3037	0.39	-0.2
3,615,189	-		Sama_3037	0.39	+0.2
3,615,189	-		Sama_3037	0.39	-0.2
3,615,241	+		Sama_3037	0.46	+0.5
3,615,242	-		Sama_3037	0.46	-0.1
3,615,242	-		Sama_3037	0.46	+0.7
3,615,268	+		Sama_3037	0.50	+0.9
3,615,268	+		Sama_3037	0.50	-0.3
3,615,439	-		Sama_3037	0.73	-0.8
3,615,487	+		Sama_3037	0.80	-0.9
3,615,488	-		Sama_3037	0.80	-0.2
3,615,488	-		Sama_3037	0.80	+0.8
3,615,488	-		Sama_3037	0.80	-1.9
3,615,488	-		Sama_3037	0.80	+1.0
3,615,493	+		Sama_3037	0.81	+1.1
3,615,493	+		Sama_3037	0.81	+1.6
3,615,493	+		Sama_3037	0.81	+0.7
3,615,494	-		Sama_3037	0.81	-0.4
3,615,494	-		Sama_3037	0.81	+0.1
3,615,494	-		Sama_3037	0.81	+1.3
3,615,494	-		Sama_3037	0.81	+0.2
3,615,494	-		Sama_3037	0.81	-0.9
3,615,517	-		Sama_3037	0.84	+0.3
3,615,551	+		Sama_3037	0.89	+0.9
3,615,563	-				-1.1
3,615,634	+				+0.2
3,615,634	+				+0.0
3,615,634	+				-1.5
3,615,634	+				-1.1
3,615,635	-				+0.7
3,615,662	+				+0.1
3,615,662	+				+0.3
3,615,697	-		Sama_3038	0.11	-0.1
3,615,703	-		Sama_3038	0.13	+0.3
3,615,709	+		Sama_3038	0.14	-0.5
3,615,709	+		Sama_3038	0.14	+0.1
3,615,709	+		Sama_3038	0.14	+2.0
3,615,709	+		Sama_3038	0.14	-1.5
3,615,710	-		Sama_3038	0.15	+0.1
3,615,710	-		Sama_3038	0.15	+0.5
3,615,710	-		Sama_3038	0.15	+0.2
3,615,710	-		Sama_3038	0.15	-0.6
3,615,790	+		Sama_3038	0.39	-0.9
3,615,791	-		Sama_3038	0.39	-0.5
3,615,791	-		Sama_3038	0.39	-0.5
3,615,791	-		Sama_3038	0.39	+0.1
3,615,791	-		Sama_3038	0.39	+0.4
3,615,813	+		Sama_3038	0.46	+0.2
3,615,814	-		Sama_3038	0.46	-0.1
3,615,819	+		Sama_3038	0.47	-0.3
3,615,819	-		Sama_3038	0.47	-0.5
3,615,820	-		Sama_3038	0.48	+0.7