Strain Fitness in Shewanella amazonensis SB2B around Sama_2015

Experiment: Tween 20

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20
2,448,591	-		Sama_2014	0.49	-0.0
2,448,623	+		Sama_2014	0.51	-0.0
2,448,624	-		Sama_2014	0.51	-0.1
2,448,672	+		Sama_2014	0.54	+0.7
2,448,672	+		Sama_2014	0.54	+3.9
2,448,672	+		Sama_2014	0.54	+0.8
2,448,672	+		Sama_2014	0.54	-0.8
2,448,672	+		Sama_2014	0.54	+0.9
2,448,672	+		Sama_2014	0.54	+0.0
2,448,673	-		Sama_2014	0.54	-0.5
2,448,673	-		Sama_2014	0.54	-0.2
2,448,673	-		Sama_2014	0.54	+0.0
2,448,673	-		Sama_2014	0.54	-1.1
2,448,673	-		Sama_2014	0.54	-0.2
2,448,673	-		Sama_2014	0.54	-0.7
2,448,673	-		Sama_2014	0.54	+1.0
2,448,762	-		Sama_2014	0.59	+0.4
2,448,762	-		Sama_2014	0.59	+0.6
2,448,771	+		Sama_2014	0.59	-0.0
2,448,771	+		Sama_2014	0.59	+0.4
2,448,771	+		Sama_2014	0.59	+0.2
2,448,771	+		Sama_2014	0.59	-0.8
2,448,771	+		Sama_2014	0.59	+0.8
2,448,771	+		Sama_2014	0.59	+0.3
2,448,771	+		Sama_2014	0.59	-0.2
2,448,771	+		Sama_2014	0.59	+0.5
2,448,771	+		Sama_2014	0.59	+1.2
2,448,771	+		Sama_2014	0.59	+0.4
2,448,771	+		Sama_2014	0.59	-0.1
2,448,772	-		Sama_2014	0.59	+0.2
2,448,772	-		Sama_2014	0.59	+0.2
2,448,772	-		Sama_2014	0.59	+0.7
2,448,772	-		Sama_2014	0.59	-1.1
2,448,772	-		Sama_2014	0.59	-0.1
2,448,772	-		Sama_2014	0.59	-0.7
2,448,772	-		Sama_2014	0.59	+1.2
2,448,772	-		Sama_2014	0.59	-0.8
2,448,772	-		Sama_2014	0.59	+0.4
2,448,772	-		Sama_2014	0.59	+1.0
2,448,772	-		Sama_2014	0.59	-1.9
2,448,772	-		Sama_2014	0.59	+1.0
2,448,772	-		Sama_2014	0.59	+0.0
2,448,772	-		Sama_2014	0.59	+1.4
2,448,772	-		Sama_2014	0.59	+0.3
2,448,772	-		Sama_2014	0.59	+0.9
2,448,772	-		Sama_2014	0.59	+0.3
2,448,772	-		Sama_2014	0.59	+0.9
2,448,772	-		Sama_2014	0.59	+0.9
2,448,772	-		Sama_2014	0.59	+1.2
2,448,772	-		Sama_2014	0.59	-1.1
2,448,830	+		Sama_2014	0.63	-0.9
2,448,831	-		Sama_2014	0.63	+0.1
2,448,969	-		Sama_2014	0.70	-1.3
2,448,982	+		Sama_2014	0.71	-0.7
2,448,983	-		Sama_2014	0.71	+0.0
2,449,031	+		Sama_2014	0.74	+0.6
2,449,031	+		Sama_2014	0.74	+0.7
2,449,031	+		Sama_2014	0.74	-1.2
2,449,031	+		Sama_2014	0.74	-0.7
2,449,031	+		Sama_2014	0.74	+1.0
2,449,032	-		Sama_2014	0.74	-1.8
2,449,032	-		Sama_2014	0.74	-0.8
2,449,054	-		Sama_2014	0.75	+1.3
2,449,066	-		Sama_2014	0.76	+0.8
2,449,066	-		Sama_2014	0.76	-1.8
2,449,121	+		Sama_2014	0.79	+0.7
2,449,178	+		Sama_2014	0.82	+0.5
2,449,179	-		Sama_2014	0.82	+0.8
2,449,179	-		Sama_2014	0.82	-2.0
2,449,279	+		Sama_2014	0.88	+0.7
2,449,280	-		Sama_2014	0.88	+0.4
2,449,335	-				+0.8
2,449,431	-				-0.8
2,449,431	-				-0.3
2,449,431	-				+0.2
2,449,517	+				+1.2
2,449,517	+				-0.4
2,449,522	+				-0.1
2,449,523	-				-0.1
2,449,523	-				-0.1
2,449,562	+				+1.4
2,449,563	-				+0.7
2,449,570	+				+0.9
2,449,571	-				+0.5
2,449,571	-				-0.4
2,449,615	-				-0.4
2,449,620	+				+0.2
2,449,681	-		Sama_2015	0.20	+0.3
2,449,702	+		Sama_2015	0.23	-0.2
2,449,702	+		Sama_2015	0.23	+0.4
2,449,703	-		Sama_2015	0.23	+0.7
2,449,703	-		Sama_2015	0.23	-0.4
2,449,703	-		Sama_2015	0.23	+0.5
2,449,703	-		Sama_2015	0.23	+0.0
2,449,703	-		Sama_2015	0.23	+0.8
2,449,703	-		Sama_2015	0.23	+0.3
2,449,703	-		Sama_2015	0.23	-0.5
2,449,703	-		Sama_2015	0.23	-0.3
2,449,707	+		Sama_2015	0.24	+0.8
2,449,708	-		Sama_2015	0.24	+0.1
2,449,711	+		Sama_2015	0.25	-1.0
2,449,711	+		Sama_2015	0.25	-0.7
2,449,712	-		Sama_2015	0.25	-2.1
2,449,762	-		Sama_2015	0.33	-0.2
2,449,849	-		Sama_2015	0.47	+0.2
2,449,909	+		Sama_2015	0.57	+0.4
2,449,909	+		Sama_2015	0.57	+2.2
2,449,909	+		Sama_2015	0.57	+0.0
2,449,910	-		Sama_2015	0.57	-3.0
2,450,023	+		Sama_2015	0.76	+1.5
2,450,024	-		Sama_2015	0.76	-0.8
2,450,034	+		Sama_2015	0.78	+1.0
2,450,115	+				-1.3
2,450,115	+				-1.0
2,450,115	+				+0.8
2,450,116	-				+0.2
2,450,129	-				-0.4
2,450,194	+				+0.0
2,450,199	+				+0.0
2,450,229	+				-0.2
2,450,230	-				-0.2
2,450,231	+				+0.4
2,450,232	+				+2.0
2,450,232	+				-2.4
2,450,232	+				+1.5
2,450,233	-				-0.3
2,450,233	-				+0.8
2,450,235	-				+0.7
2,450,262	+				+2.2
2,450,263	-				+0.0
2,450,274	+				-0.4
2,450,289	+				-1.6
2,450,290	-				-0.2
2,450,313	+				-0.8
2,450,313	+				-1.2
2,450,313	+				-0.6
2,450,314	-				-0.8
2,450,317	+				-0.6
2,450,317	+				-0.4
2,450,317	+				+0.9
2,450,317	+				+0.5
2,450,317	+				+0.4
2,450,318	-				+0.2
2,450,318	-				-1.1
2,450,339	+				-1.4
2,450,339	+				+0.8
2,450,340	-				+0.4
2,450,340	-				+0.9
2,450,340	-				+0.7
2,450,446	+		Sama_2016	0.13	-0.8
2,450,448	+		Sama_2016	0.13	-0.5
2,450,448	+		Sama_2016	0.13	+0.7
2,450,448	+		Sama_2016	0.13	+0.5
2,450,448	+		Sama_2016	0.13	-0.2
2,450,486	+		Sama_2016	0.16	+1.2
2,450,486	+		Sama_2016	0.16	-0.1
2,450,500	+		Sama_2016	0.17	+0.2
2,450,500	+		Sama_2016	0.17	+0.2
2,450,500	+		Sama_2016	0.17	+1.5
2,450,500	+		Sama_2016	0.17	-0.4
2,450,500	+		Sama_2016	0.17	-0.5
2,450,500	+		Sama_2016	0.17	-1.8
2,450,500	+		Sama_2016	0.17	+0.7
2,450,500	+		Sama_2016	0.17	-1.0
2,450,500	+		Sama_2016	0.17	+0.9
2,450,501	-		Sama_2016	0.17	+1.2
2,450,501	-		Sama_2016	0.17	+0.8
2,450,501	-		Sama_2016	0.17	-0.0
2,450,504	+		Sama_2016	0.17	-0.1
2,450,504	+		Sama_2016	0.17	-0.2
2,450,504	+		Sama_2016	0.17	-0.1
2,450,504	+		Sama_2016	0.17	+0.2
2,450,504	+		Sama_2016	0.17	-0.7
2,450,504	+		Sama_2016	0.17	+0.6
2,450,504	+		Sama_2016	0.17	-0.0
2,450,505	-		Sama_2016	0.18	-0.6
2,450,505	-		Sama_2016	0.18	+0.0
2,450,505	-		Sama_2016	0.18	+0.8
2,450,505	-		Sama_2016	0.18	-0.3
2,450,780	+		Sama_2016	0.38	-0.1
2,450,780	+		Sama_2016	0.38	-0.6
2,450,780	+		Sama_2016	0.38	-0.4
2,450,780	+		Sama_2016	0.38	+0.6
2,450,804	+		Sama_2016	0.40	-0.7
2,450,804	+		Sama_2016	0.40	+0.6
2,450,804	+		Sama_2016	0.40	-0.3
2,450,804	+		Sama_2016	0.40	-0.9
2,450,805	-		Sama_2016	0.40	-0.8
2,450,805	-		Sama_2016	0.40	+0.2
2,450,821	+		Sama_2016	0.41	-1.1
2,450,895	+		Sama_2016	0.47	+0.4
2,450,895	+		Sama_2016	0.47	+0.3
2,450,926	-		Sama_2016	0.49	+0.8
2,450,947	+		Sama_2016	0.50	-0.4
2,450,947	+		Sama_2016	0.50	-0.8
2,450,948	-		Sama_2016	0.51	-0.1
2,451,045	+		Sama_2016	0.58	+0.7
2,451,064	+		Sama_2016	0.59	-0.3
2,451,064	+		Sama_2016	0.59	-1.1
2,451,130	+		Sama_2016	0.64	+0.1
2,451,130	+		Sama_2016	0.64	+0.2
2,451,130	+		Sama_2016	0.64	-0.7
2,451,130	+		Sama_2016	0.64	-0.1