Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c01000

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
93,413	+		PGA1_c00980	0.73	-1.8
93,418	+		PGA1_c00980	0.74	+0.0
93,421	-		PGA1_c00980	0.74	+0.9
93,421	-		PGA1_c00980	0.74	-0.4
93,422	+		PGA1_c00980	0.75	-1.6
93,426	-		PGA1_c00980	0.75	+0.8
93,430	-		PGA1_c00980	0.76	+1.7
93,439	+		PGA1_c00980	0.78	+0.4
93,466	-		PGA1_c00980	0.82	+0.0
93,494	-		PGA1_c00980	0.87	+0.1
93,511	+				-0.3
93,511	+				-2.2
93,511	+				-0.4
93,511	+				+0.2
93,511	+				+0.3
93,518	+				+0.5
93,529	+				-0.2
93,529	+				-1.2
93,539	+				+0.3
93,547	+				-0.2
93,547	-				-1.0
93,547	-				-0.6
93,590	+				+0.3
93,597	+				-1.3
93,598	-				-1.8
93,608	-				-0.7
93,643	+				+0.5
93,652	-				+1.0
94,269	+				+0.7
94,269	+				+3.9
94,269	+				+0.8
94,277	-				-0.2
94,277	-				-0.2
94,300	-				-1.1
94,632	-		PGA1_c01000	0.75	-1.0
94,646	+		PGA1_c01000	0.79	-0.7
94,718	-				-2.2
94,723	-				-2.6
94,786	+				-0.4
94,794	-				-0.5
94,794	-				-0.5
94,815	-				-0.3
94,815	-				+0.7
94,889	+				-2.3
94,893	-				-2.0
94,903	-				+0.0
94,940	+				+0.1
94,964	+				-1.1
95,023	+		PGA1_c01010	0.12	-1.0
95,033	-		PGA1_c01010	0.13	-0.9
95,033	-		PGA1_c01010	0.13	-1.4
95,056	+		PGA1_c01010	0.14	-2.1
95,127	+		PGA1_c01010	0.17	-1.2
95,127	+		PGA1_c01010	0.17	+0.3
95,135	-		PGA1_c01010	0.17	-0.1
95,135	-		PGA1_c01010	0.17	-1.9
95,147	-		PGA1_c01010	0.18	-0.7
95,171	-		PGA1_c01010	0.19	-0.3
95,178	-		PGA1_c01010	0.20	-0.7
95,280	-		PGA1_c01010	0.24	-0.5
95,328	+		PGA1_c01010	0.27	-1.2
95,333	+		PGA1_c01010	0.27	-0.9
95,333	+		PGA1_c01010	0.27	-0.3
95,336	-		PGA1_c01010	0.27	+0.2
95,341	-		PGA1_c01010	0.27	-1.3
95,439	-		PGA1_c01010	0.32	-1.3
95,520	-		PGA1_c01010	0.36	-0.5
95,520	-		PGA1_c01010	0.36	-3.3
95,579	-		PGA1_c01010	0.38	+0.5
95,583	-		PGA1_c01010	0.38	-0.9
95,612	+		PGA1_c01010	0.40	-1.9
95,620	-		PGA1_c01010	0.40	-1.2
95,634	-		PGA1_c01010	0.41	-0.1
95,642	+		PGA1_c01010	0.41	+1.9
95,650	-		PGA1_c01010	0.42	-0.3
95,719	-		PGA1_c01010	0.45	-2.1