Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_667 and HP15_668 are separated by 1 nucleotides HP15_668 and HP15_669 overlap by 1 nucleotides HP15_669 and HP15_670 are separated by 74 nucleotides HP15_670 and HP15_671 overlap by 23 nucleotides
HP15_667: HP15_667 - prophage LambdaW5, minor tail protein Z-like protein, at 687,260 to 687,802
_667
HP15_668: HP15_668 - conserved hypothetical protein, at 687,804 to 688,115
_668
HP15_669: HP15_669 - protein containing Rho termination factor, N-terminal domain, at 688,115 to 688,414
_669
HP15_670: HP15_670 - peptidase U35, phage prohead, at 688,489 to 690,591
_670
HP15_671: HP15_671 - phage portal protein, lambda family, at 690,569 to 692,146
_671
Position (kb) 688
689
690
691 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 687.512 kb on - strand, within HP15_667 at 687.519 kb on + strand, within HP15_667 at 687.526 kb on + strand, within HP15_667 at 687.529 kb on - strand, within HP15_667 at 687.544 kb on + strand, within HP15_667 at 687.552 kb on - strand, within HP15_667 at 687.782 kb on - strand at 687.848 kb on + strand, within HP15_668 at 687.867 kb on + strand, within HP15_668 at 687.875 kb on - strand, within HP15_668 at 687.997 kb on - strand, within HP15_668 at 688.048 kb on + strand, within HP15_668 at 688.057 kb on - strand, within HP15_668 at 688.164 kb on - strand, within HP15_669 at 688.196 kb on + strand, within HP15_669 at 688.267 kb on - strand, within HP15_669 at 688.278 kb on + strand, within HP15_669 at 688.325 kb on - strand, within HP15_669 at 688.329 kb on - strand, within HP15_669 at 688.338 kb on + strand, within HP15_669 at 688.461 kb on + strand at 688.469 kb on - strand at 688.608 kb on + strand at 688.608 kb on + strand at 688.608 kb on + strand at 688.608 kb on + strand at 688.608 kb on + strand at 688.616 kb on - strand at 688.616 kb on - strand at 688.689 kb on + strand at 688.766 kb on + strand, within HP15_670 at 688.766 kb on + strand, within HP15_670 at 688.766 kb on + strand, within HP15_670 at 688.799 kb on + strand, within HP15_670 at 688.878 kb on - strand, within HP15_670 at 689.024 kb on - strand, within HP15_670 at 689.088 kb on + strand, within HP15_670 at 689.098 kb on + strand, within HP15_670 at 689.136 kb on + strand, within HP15_670 at 689.143 kb on + strand, within HP15_670 at 689.190 kb on + strand, within HP15_670 at 689.242 kb on + strand, within HP15_670 at 689.285 kb on + strand, within HP15_670 at 689.285 kb on + strand, within HP15_670 at 689.335 kb on + strand, within HP15_670 at 689.447 kb on - strand, within HP15_670 at 689.447 kb on - strand, within HP15_670 at 689.483 kb on + strand, within HP15_670 at 689.516 kb on + strand, within HP15_670 at 689.537 kb on - strand, within HP15_670 at 689.556 kb on - strand, within HP15_670 at 689.651 kb on - strand, within HP15_670 at 689.731 kb on + strand, within HP15_670 at 689.768 kb on + strand, within HP15_670 at 689.776 kb on - strand, within HP15_670 at 689.831 kb on + strand, within HP15_670 at 689.846 kb on + strand, within HP15_670 at 689.854 kb on - strand, within HP15_670 at 690.048 kb on - strand, within HP15_670 at 690.054 kb on - strand, within HP15_670 at 690.147 kb on + strand, within HP15_670 at 690.147 kb on + strand, within HP15_670 at 690.147 kb on + strand, within HP15_670 at 690.155 kb on - strand, within HP15_670 at 690.170 kb on - strand, within HP15_670 at 690.175 kb on - strand, within HP15_670 at 690.230 kb on - strand, within HP15_670 at 690.313 kb on + strand, within HP15_670 at 690.364 kb on - strand, within HP15_670 at 690.533 kb on + strand at 690.652 kb on - strand at 690.734 kb on - strand, within HP15_671 at 690.754 kb on + strand, within HP15_671 at 690.820 kb on + strand, within HP15_671 at 690.921 kb on + strand, within HP15_671 at 690.921 kb on + strand, within HP15_671 at 690.929 kb on - strand, within HP15_671 at 690.931 kb on + strand, within HP15_671 at 690.961 kb on - strand, within HP15_671 at 691.026 kb on + strand, within HP15_671 at 691.080 kb on - strand, within HP15_671 at 691.085 kb on - strand, within HP15_671 at 691.203 kb on - strand, within HP15_671 at 691.210 kb on + strand, within HP15_671 at 691.226 kb on - strand, within HP15_671 at 691.253 kb on + strand, within HP15_671 at 691.254 kb on - strand, within HP15_671 at 691.358 kb on + strand, within HP15_671 at 691.374 kb on + strand, within HP15_671 at 691.413 kb on - strand, within HP15_671
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 687,512 - HP15_667 0.46 -0.7 687,519 + HP15_667 0.48 -0.8 687,526 + HP15_667 0.49 -1.0 687,529 - HP15_667 0.50 -0.4 687,544 + HP15_667 0.52 +0.1 687,552 - HP15_667 0.54 -0.5 687,782 - +0.5 687,848 + HP15_668 0.14 -0.6 687,867 + HP15_668 0.20 -0.0 687,875 - HP15_668 0.23 -0.7 687,997 - HP15_668 0.62 -0.2 688,048 + HP15_668 0.78 -0.6 688,057 - HP15_668 0.81 +0.2 688,164 - HP15_669 0.16 -1.2 688,196 + HP15_669 0.27 +0.2 688,267 - HP15_669 0.51 -0.8 688,278 + HP15_669 0.54 -1.7 688,325 - HP15_669 0.70 -0.7 688,329 - HP15_669 0.71 -0.0 688,338 + HP15_669 0.74 +0.5 688,461 + -1.9 688,469 - -0.6 688,608 + -0.3 688,608 + -1.0 688,608 + +0.2 688,608 + +0.1 688,608 + -0.2 688,616 - +0.1 688,616 - -0.5 688,689 + -0.5 688,766 + HP15_670 0.13 +1.0 688,766 + HP15_670 0.13 -0.1 688,766 + HP15_670 0.13 -0.1 688,799 + HP15_670 0.15 +0.1 688,878 - HP15_670 0.18 +0.3 689,024 - HP15_670 0.25 -0.7 689,088 + HP15_670 0.28 -0.5 689,098 + HP15_670 0.29 -1.7 689,136 + HP15_670 0.31 -0.7 689,143 + HP15_670 0.31 -0.2 689,190 + HP15_670 0.33 -0.1 689,242 + HP15_670 0.36 +0.7 689,285 + HP15_670 0.38 +1.1 689,285 + HP15_670 0.38 -0.2 689,335 + HP15_670 0.40 -0.2 689,447 - HP15_670 0.46 -0.7 689,447 - HP15_670 0.46 +0.2 689,483 + HP15_670 0.47 -0.6 689,516 + HP15_670 0.49 -0.4 689,537 - HP15_670 0.50 +0.1 689,556 - HP15_670 0.51 -0.7 689,651 - HP15_670 0.55 -0.1 689,731 + HP15_670 0.59 +0.3 689,768 + HP15_670 0.61 -1.4 689,776 - HP15_670 0.61 -1.2 689,831 + HP15_670 0.64 -0.3 689,846 + HP15_670 0.65 -0.3 689,854 - HP15_670 0.65 +0.0 690,048 - HP15_670 0.74 +0.5 690,054 - HP15_670 0.74 -0.4 690,147 + HP15_670 0.79 +0.1 690,147 + HP15_670 0.79 +1.5 690,147 + HP15_670 0.79 -0.8 690,155 - HP15_670 0.79 +0.5 690,170 - HP15_670 0.80 +0.5 690,175 - HP15_670 0.80 -0.4 690,230 - HP15_670 0.83 +0.2 690,313 + HP15_670 0.87 -0.6 690,364 - HP15_670 0.89 -0.2 690,533 + -3.4 690,652 - +0.3 690,734 - HP15_671 0.10 -2.0 690,754 + HP15_671 0.12 -0.5 690,820 + HP15_671 0.16 +0.1 690,921 + HP15_671 0.22 +0.1 690,921 + HP15_671 0.22 -0.3 690,929 - HP15_671 0.23 -0.3 690,931 + HP15_671 0.23 -0.4 690,961 - HP15_671 0.25 -0.1 691,026 + HP15_671 0.29 -0.5 691,080 - HP15_671 0.32 -0.5 691,085 - HP15_671 0.33 +0.7 691,203 - HP15_671 0.40 -3.1 691,210 + HP15_671 0.41 -1.9 691,226 - HP15_671 0.42 -0.8 691,253 + HP15_671 0.43 -0.8 691,254 - HP15_671 0.43 -3.0 691,358 + HP15_671 0.50 -0.4 691,374 + HP15_671 0.51 +1.9 691,413 - HP15_671 0.53 -0.5
Or see this region's nucleotide sequence