Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27020

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
2,816,689	-				+0.3
2,816,713	+				-0.2
2,816,767	-		PGA1_c27000	0.26	+0.1
2,816,813	+		PGA1_c27000	0.49	+0.5
2,816,813	+		PGA1_c27000	0.49	-2.1
2,816,813	+		PGA1_c27000	0.49	+1.0
2,816,818	+		PGA1_c27000	0.52	+0.7
2,816,872	+		PGA1_c27000	0.79	-0.2
2,816,880	-		PGA1_c27000	0.83	-2.1
2,816,884	+		PGA1_c27000	0.85	-0.5
2,816,904	-				+1.3
2,816,917	-				-0.3
2,816,949	-				-0.6
2,817,061	-				+0.5
2,817,102	-				-1.5
2,817,113	+				-1.1
2,817,134	+				-0.1
2,817,147	+				-2.7
2,817,155	-				+0.5
2,817,156	+				-0.1
2,817,164	-				-1.1
2,817,174	-				+0.2
2,817,245	+		PGA1_c27010	0.21	-0.7
2,817,256	+		PGA1_c27010	0.23	-1.3
2,817,258	-		PGA1_c27010	0.23	-0.4
2,817,258	-		PGA1_c27010	0.23	-2.1
2,817,321	+		PGA1_c27010	0.35	+0.8
2,817,382	+		PGA1_c27010	0.46	-0.8
2,817,552	+		PGA1_c27010	0.76	-1.5
2,817,555	-		PGA1_c27010	0.77	-1.1
2,817,562	-		PGA1_c27010	0.78	-0.6
2,817,575	+		PGA1_c27010	0.81	+1.1
2,817,580	+		PGA1_c27010	0.81	-0.5
2,817,624	-		PGA1_c27010	0.89	-1.3
2,817,674	-				-2.7
2,817,718	-				+0.5
2,817,725	+		PGA1_c27020	0.10	-2.7
2,817,783	+		PGA1_c27020	0.25	+0.3
2,817,791	-		PGA1_c27020	0.27	-0.6
2,817,805	+		PGA1_c27020	0.30	+1.5
2,817,861	-		PGA1_c27020	0.44	-1.1
2,817,877	-		PGA1_c27020	0.47	+2.8
2,817,919	-		PGA1_c27020	0.58	-1.4
2,818,005	+		PGA1_c27020	0.79	-2.5
2,818,064	+				+0.5
2,818,064	+				-0.5
2,818,072	-				-1.8
2,818,081	+				-2.3
2,818,089	-				+0.8
2,818,089	-				+1.5
2,818,103	-				-0.1
2,818,135	-				-0.3
2,818,137	+				-0.1
2,818,145	-				+0.5
2,818,145	-				-2.7
2,818,147	+				-0.5
2,818,155	-				-1.1
2,818,155	-				-0.7
2,818,212	-		PGA1_c27030	0.17	+1.2
2,818,217	+		PGA1_c27030	0.18	-1.3
2,818,260	-		PGA1_c27030	0.24	-1.5
2,818,331	-		PGA1_c27030	0.33	-0.9
2,818,331	-		PGA1_c27030	0.33	-2.8
2,818,336	-		PGA1_c27030	0.34	-1.3
2,818,336	-		PGA1_c27030	0.34	+0.5
2,818,532	+		PGA1_c27030	0.61	-0.2
2,818,540	-		PGA1_c27030	0.62	-0.8
2,818,558	-		PGA1_c27030	0.64	+0.5
2,818,558	-		PGA1_c27030	0.64	+1.2
2,818,600	-		PGA1_c27030	0.70	+0.5
2,818,608	-		PGA1_c27030	0.71	-0.1
2,818,625	+		PGA1_c27030	0.73	+1.7
2,818,635	+		PGA1_c27030	0.75	+0.5
2,818,777	+				-2.3
2,818,777	+				+2.8
2,818,785	-				-0.1
2,818,807	-				+1.1
2,818,818	+				-0.1
2,818,826	-				+0.5
2,818,834	+				-1.8
2,818,842	-				+0.5
2,818,842	-				-0.5
2,818,842	-				-2.3
2,818,853	-				-0.5
2,818,855	+				-1.8
2,818,938	+				+0.2
2,818,941	-				+0.8
2,818,941	-				-0.5
2,818,944	+				-0.5
2,818,944	+				+0.7
2,818,944	+				+0.8
2,818,949	+				+0.5
2,819,052	+		PGA1_c27040	0.16	-1.1
2,819,079	+		PGA1_c27040	0.19	+0.5
2,819,087	+		PGA1_c27040	0.20	-0.1