Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2660 and Psest_2661 are separated by 200 nucleotides Psest_2661 and Psest_2662 are separated by 227 nucleotides
Psest_2660: Psest_2660 - Predicted acyl-CoA transferases/carnitine dehydratase, at 2,846,641 to 2,847,843
_2660
Psest_2661: Psest_2661 - Isopropylmalate/homocitrate/citramalate synthases, at 2,848,044 to 2,848,979
_2661
Psest_2662: Psest_2662 - hypothetical protein, at 2,849,207 to 2,850,085
_2662
Position (kb)
2848
2849 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2847.090 kb on + strand, within Psest_2660 at 2847.090 kb on + strand, within Psest_2660 at 2847.090 kb on + strand, within Psest_2660 at 2847.090 kb on + strand, within Psest_2660 at 2847.091 kb on - strand, within Psest_2660 at 2847.091 kb on - strand, within Psest_2660 at 2847.178 kb on + strand, within Psest_2660 at 2847.194 kb on + strand, within Psest_2660 at 2847.298 kb on + strand, within Psest_2660 at 2847.299 kb on - strand, within Psest_2660 at 2847.317 kb on + strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.608 kb on - strand, within Psest_2660 at 2847.609 kb on + strand, within Psest_2660 at 2847.640 kb on + strand, within Psest_2660 at 2847.641 kb on - strand, within Psest_2660 at 2847.779 kb on + strand at 2847.923 kb on + strand at 2847.930 kb on + strand at 2847.930 kb on + strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.942 kb on + strand at 2847.942 kb on + strand at 2847.942 kb on + strand at 2847.943 kb on - strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.266 kb on + strand, within Psest_2661 at 2848.267 kb on - strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.421 kb on - strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.784 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2849.209 kb on - strand at 2849.210 kb on + strand at 2849.211 kb on - strand at 2849.261 kb on + strand at 2849.272 kb on - strand at 2849.315 kb on - strand, within Psest_2662 at 2849.315 kb on - strand, within Psest_2662 at 2849.357 kb on + strand, within Psest_2662 at 2849.357 kb on + strand, within Psest_2662 at 2849.364 kb on - strand, within Psest_2662 at 2849.378 kb on + strand, within Psest_2662 at 2849.585 kb on + strand, within Psest_2662 at 2849.616 kb on - strand, within Psest_2662 at 2849.646 kb on - strand, within Psest_2662 at 2849.655 kb on - strand, within Psest_2662 at 2849.670 kb on - strand, within Psest_2662 at 2849.720 kb on - strand, within Psest_2662 at 2849.740 kb on + strand, within Psest_2662 at 2849.741 kb on - strand, within Psest_2662 at 2849.768 kb on + strand, within Psest_2662 at 2849.816 kb on + strand, within Psest_2662 at 2849.877 kb on + strand, within Psest_2662 at 2849.878 kb on - strand, within Psest_2662 at 2849.878 kb on - strand, within Psest_2662 at 2849.878 kb on - strand, within Psest_2662
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 2,847,090 + Psest_2660 0.37 +0.3 2,847,090 + Psest_2660 0.37 +2.0 2,847,090 + Psest_2660 0.37 +1.1 2,847,090 + Psest_2660 0.37 -1.7 2,847,091 - Psest_2660 0.37 +0.5 2,847,091 - Psest_2660 0.37 +0.5 2,847,178 + Psest_2660 0.45 +0.3 2,847,194 + Psest_2660 0.46 +0.9 2,847,298 + Psest_2660 0.55 -1.7 2,847,299 - Psest_2660 0.55 -0.3 2,847,317 + Psest_2660 0.56 -0.6 2,847,389 - Psest_2660 0.62 -1.5 2,847,389 - Psest_2660 0.62 -0.5 2,847,389 - Psest_2660 0.62 -0.2 2,847,389 - Psest_2660 0.62 +0.6 2,847,421 + Psest_2660 0.65 +0.8 2,847,421 + Psest_2660 0.65 +0.1 2,847,421 + Psest_2660 0.65 +0.3 2,847,421 + Psest_2660 0.65 -0.3 2,847,421 + Psest_2660 0.65 -1.1 2,847,421 + Psest_2660 0.65 -0.4 2,847,421 + Psest_2660 0.65 +1.3 2,847,422 - Psest_2660 0.65 -0.8 2,847,422 - Psest_2660 0.65 +0.8 2,847,422 - Psest_2660 0.65 -0.1 2,847,422 - Psest_2660 0.65 -0.0 2,847,422 - Psest_2660 0.65 -0.6 2,847,422 - Psest_2660 0.65 -0.5 2,847,422 - Psest_2660 0.65 +1.2 2,847,422 - Psest_2660 0.65 -1.9 2,847,422 - Psest_2660 0.65 -0.8 2,847,422 - Psest_2660 0.65 +0.2 2,847,422 - Psest_2660 0.65 +0.7 2,847,422 - Psest_2660 0.65 -1.8 2,847,608 - Psest_2660 0.80 -0.9 2,847,609 + Psest_2660 0.80 +0.9 2,847,640 + Psest_2660 0.83 +0.4 2,847,641 - Psest_2660 0.83 -0.3 2,847,779 + -0.0 2,847,923 + +0.3 2,847,930 + +0.1 2,847,930 + +0.5 2,847,931 - +0.2 2,847,931 - +1.1 2,847,931 - +0.9 2,847,931 - -0.5 2,847,931 - +0.7 2,847,931 - -0.4 2,847,942 + +1.2 2,847,942 + -0.2 2,847,942 + -0.1 2,847,943 - +0.1 2,848,059 + +0.2 2,848,059 + +0.9 2,848,059 + +0.5 2,848,059 + +0.1 2,848,059 + +0.4 2,848,059 + -0.0 2,848,059 + +0.1 2,848,059 + -0.9 2,848,059 + +0.1 2,848,059 + -0.5 2,848,059 + -1.5 2,848,060 - +0.9 2,848,060 - -2.4 2,848,060 - -1.3 2,848,060 - -0.5 2,848,060 - -0.7 2,848,060 - -1.6 2,848,060 - -0.3 2,848,060 - +0.1 2,848,060 - -0.1 2,848,060 - -0.1 2,848,060 - +0.5 2,848,060 - +0.5 2,848,060 - +0.5 2,848,060 - +2.4 2,848,060 - +0.8 2,848,266 + Psest_2661 0.24 +0.5 2,848,267 - Psest_2661 0.24 -0.5 2,848,420 + Psest_2661 0.40 -0.6 2,848,420 + Psest_2661 0.40 -1.6 2,848,420 + Psest_2661 0.40 -0.0 2,848,420 + Psest_2661 0.40 -0.9 2,848,420 + Psest_2661 0.40 -0.2 2,848,421 - Psest_2661 0.40 -0.2 2,848,515 + Psest_2661 0.50 +0.3 2,848,515 + Psest_2661 0.50 +0.2 2,848,515 + Psest_2661 0.50 -0.8 2,848,515 + Psest_2661 0.50 -1.5 2,848,515 + Psest_2661 0.50 -0.7 2,848,515 + Psest_2661 0.50 +1.7 2,848,515 + Psest_2661 0.50 +0.2 2,848,515 + Psest_2661 0.50 +0.3 2,848,516 - Psest_2661 0.50 +1.4 2,848,516 - Psest_2661 0.50 +0.2 2,848,516 - Psest_2661 0.50 +0.3 2,848,516 - Psest_2661 0.50 +0.1 2,848,516 - Psest_2661 0.50 -0.1 2,848,516 - Psest_2661 0.50 +1.0 2,848,516 - Psest_2661 0.50 +0.6 2,848,516 - Psest_2661 0.50 -0.5 2,848,516 - Psest_2661 0.50 -0.8 2,848,516 - Psest_2661 0.50 +0.5 2,848,784 + Psest_2661 0.79 -1.2 2,848,808 + Psest_2661 0.82 +0.1 2,848,808 + Psest_2661 0.82 +1.1 2,848,808 + Psest_2661 0.82 +1.3 2,848,808 + Psest_2661 0.82 +0.8 2,848,808 + Psest_2661 0.82 +1.3 2,848,808 + Psest_2661 0.82 +1.6 2,848,808 + Psest_2661 0.82 -0.3 2,848,808 + Psest_2661 0.82 +0.8 2,848,808 + Psest_2661 0.82 -0.4 2,848,808 + Psest_2661 0.82 +0.1 2,848,808 + Psest_2661 0.82 +0.2 2,848,808 + Psest_2661 0.82 -0.0 2,848,808 + Psest_2661 0.82 +0.2 2,848,809 - Psest_2661 0.82 -0.5 2,848,809 - Psest_2661 0.82 +0.1 2,848,809 - Psest_2661 0.82 +0.2 2,848,809 - Psest_2661 0.82 +0.4 2,848,809 - Psest_2661 0.82 +1.8 2,848,809 - Psest_2661 0.82 +0.3 2,848,809 - Psest_2661 0.82 +0.3 2,848,809 - Psest_2661 0.82 +1.3 2,848,809 - Psest_2661 0.82 -0.5 2,848,809 - Psest_2661 0.82 -1.4 2,848,809 - Psest_2661 0.82 -1.2 2,848,809 - Psest_2661 0.82 +0.7 2,848,809 - Psest_2661 0.82 -0.3 2,848,809 - Psest_2661 0.82 -1.6 2,849,209 - +1.0 2,849,210 + -0.5 2,849,211 - +0.3 2,849,261 + +1.8 2,849,272 - -1.2 2,849,315 - Psest_2662 0.12 -0.4 2,849,315 - Psest_2662 0.12 +0.1 2,849,357 + Psest_2662 0.17 -0.0 2,849,357 + Psest_2662 0.17 +1.2 2,849,364 - Psest_2662 0.18 +1.8 2,849,378 + Psest_2662 0.19 -0.3 2,849,585 + Psest_2662 0.43 +0.9 2,849,616 - Psest_2662 0.47 +0.5 2,849,646 - Psest_2662 0.50 +1.3 2,849,655 - Psest_2662 0.51 +1.5 2,849,670 - Psest_2662 0.53 -0.4 2,849,720 - Psest_2662 0.58 -1.6 2,849,740 + Psest_2662 0.61 -0.5 2,849,741 - Psest_2662 0.61 +0.3 2,849,768 + Psest_2662 0.64 -0.2 2,849,816 + Psest_2662 0.69 +0.1 2,849,877 + Psest_2662 0.76 -0.6 2,849,878 - Psest_2662 0.76 -0.3 2,849,878 - Psest_2662 0.76 -1.2 2,849,878 - Psest_2662 0.76 -0.4
Or see this region's nucleotide sequence