Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2586 and Psest_2587 are separated by 146 nucleotides Psest_2587 and Psest_2588 are separated by 136 nucleotides
Psest_2586: Psest_2586 - FimV N-terminal domain, at 2,766,021 to 2,768,753
_2586
Psest_2587: Psest_2587 - Aspartate-semialdehyde dehydrogenase, at 2,768,900 to 2,769,910
_2587
Psest_2588: Psest_2588 - aspartate-semialdehyde dehydrogenase, gamma-proteobacterial, at 2,770,047 to 2,771,159
_2588
Position (kb)
2768
2769
2770 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2768.023 kb on - strand, within Psest_2586 at 2768.023 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.074 kb on - strand, within Psest_2586 at 2768.163 kb on + strand, within Psest_2586 at 2768.163 kb on + strand, within Psest_2586 at 2768.163 kb on + strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.164 kb on - strand, within Psest_2586 at 2768.198 kb on - strand, within Psest_2586 at 2768.198 kb on - strand, within Psest_2586 at 2768.313 kb on - strand, within Psest_2586 at 2768.353 kb on + strand, within Psest_2586 at 2768.379 kb on - strand, within Psest_2586 at 2768.379 kb on - strand, within Psest_2586 at 2768.381 kb on - strand, within Psest_2586 at 2768.412 kb on + strand, within Psest_2586 at 2768.413 kb on - strand, within Psest_2586 at 2768.413 kb on - strand, within Psest_2586 at 2768.472 kb on + strand, within Psest_2586 at 2768.497 kb on - strand at 2768.528 kb on - strand at 2768.755 kb on - strand at 2768.759 kb on - strand at 2768.802 kb on - strand at 2768.802 kb on - strand at 2768.873 kb on - strand at 2768.891 kb on - strand at 2768.902 kb on - strand at 2768.907 kb on + strand at 2769.033 kb on + strand, within Psest_2587 at 2769.033 kb on + strand, within Psest_2587 at 2769.033 kb on + strand, within Psest_2587 at 2769.033 kb on + strand, within Psest_2587 at 2769.034 kb on - strand, within Psest_2587 at 2769.170 kb on + strand, within Psest_2587 at 2769.170 kb on + strand, within Psest_2587 at 2769.170 kb on + strand, within Psest_2587 at 2769.171 kb on - strand, within Psest_2587 at 2769.171 kb on - strand, within Psest_2587 at 2769.171 kb on - strand, within Psest_2587 at 2769.171 kb on - strand, within Psest_2587 at 2769.171 kb on - strand, within Psest_2587 at 2769.171 kb on - strand, within Psest_2587 at 2769.171 kb on - strand, within Psest_2587 at 2769.171 kb on - strand, within Psest_2587 at 2769.378 kb on - strand, within Psest_2587 at 2769.378 kb on - strand, within Psest_2587 at 2769.378 kb on - strand, within Psest_2587 at 2769.449 kb on - strand, within Psest_2587 at 2769.462 kb on - strand, within Psest_2587 at 2769.462 kb on - strand, within Psest_2587 at 2769.743 kb on + strand, within Psest_2587 at 2769.863 kb on + strand at 2769.864 kb on - strand at 2769.904 kb on + strand at 2769.904 kb on + strand at 2769.905 kb on - strand at 2769.992 kb on + strand at 2769.992 kb on + strand at 2769.993 kb on - strand at 2769.993 kb on - strand at 2769.993 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 2,768,023 - Psest_2586 0.73 -2.0 2,768,023 - Psest_2586 0.73 +0.1 2,768,074 - Psest_2586 0.75 +0.9 2,768,074 - Psest_2586 0.75 +0.6 2,768,074 - Psest_2586 0.75 -0.1 2,768,074 - Psest_2586 0.75 -0.0 2,768,074 - Psest_2586 0.75 +0.3 2,768,074 - Psest_2586 0.75 -0.2 2,768,074 - Psest_2586 0.75 +0.2 2,768,074 - Psest_2586 0.75 +0.3 2,768,074 - Psest_2586 0.75 -0.2 2,768,074 - Psest_2586 0.75 -0.1 2,768,074 - Psest_2586 0.75 +0.1 2,768,163 + Psest_2586 0.78 -0.5 2,768,163 + Psest_2586 0.78 -0.8 2,768,163 + Psest_2586 0.78 +0.5 2,768,164 - Psest_2586 0.78 +0.4 2,768,164 - Psest_2586 0.78 +0.3 2,768,164 - Psest_2586 0.78 +0.4 2,768,164 - Psest_2586 0.78 -0.0 2,768,164 - Psest_2586 0.78 +2.6 2,768,164 - Psest_2586 0.78 -0.3 2,768,164 - Psest_2586 0.78 +0.1 2,768,164 - Psest_2586 0.78 +0.1 2,768,164 - Psest_2586 0.78 +0.3 2,768,164 - Psest_2586 0.78 -0.7 2,768,164 - Psest_2586 0.78 +0.3 2,768,164 - Psest_2586 0.78 +0.3 2,768,164 - Psest_2586 0.78 +0.3 2,768,164 - Psest_2586 0.78 +0.9 2,768,164 - Psest_2586 0.78 -0.2 2,768,164 - Psest_2586 0.78 -1.0 2,768,198 - Psest_2586 0.80 +0.1 2,768,198 - Psest_2586 0.80 +0.4 2,768,313 - Psest_2586 0.84 +1.7 2,768,353 + Psest_2586 0.85 +0.6 2,768,379 - Psest_2586 0.86 +0.6 2,768,379 - Psest_2586 0.86 +0.9 2,768,381 - Psest_2586 0.86 +0.2 2,768,412 + Psest_2586 0.87 +1.0 2,768,413 - Psest_2586 0.88 +0.7 2,768,413 - Psest_2586 0.88 -1.0 2,768,472 + Psest_2586 0.90 +1.0 2,768,497 - +0.0 2,768,528 - -0.8 2,768,755 - +0.2 2,768,759 - +0.9 2,768,802 - -0.4 2,768,802 - -1.2 2,768,873 - +0.3 2,768,891 - -1.0 2,768,902 - -0.0 2,768,907 + -0.7 2,769,033 + Psest_2587 0.13 -0.0 2,769,033 + Psest_2587 0.13 +0.5 2,769,033 + Psest_2587 0.13 +0.4 2,769,033 + Psest_2587 0.13 +0.3 2,769,034 - Psest_2587 0.13 -2.4 2,769,170 + Psest_2587 0.27 +1.3 2,769,170 + Psest_2587 0.27 +1.0 2,769,170 + Psest_2587 0.27 -0.3 2,769,171 - Psest_2587 0.27 -1.0 2,769,171 - Psest_2587 0.27 -0.4 2,769,171 - Psest_2587 0.27 -0.4 2,769,171 - Psest_2587 0.27 -0.2 2,769,171 - Psest_2587 0.27 -0.1 2,769,171 - Psest_2587 0.27 +1.9 2,769,171 - Psest_2587 0.27 -0.1 2,769,171 - Psest_2587 0.27 +0.8 2,769,378 - Psest_2587 0.47 -0.2 2,769,378 - Psest_2587 0.47 +0.2 2,769,378 - Psest_2587 0.47 +0.0 2,769,449 - Psest_2587 0.54 +1.0 2,769,462 - Psest_2587 0.56 -0.2 2,769,462 - Psest_2587 0.56 -0.2 2,769,743 + Psest_2587 0.83 +0.0 2,769,863 + +1.0 2,769,864 - -0.3 2,769,904 + +0.8 2,769,904 + +0.3 2,769,905 - -0.0 2,769,992 + +0.5 2,769,992 + -0.2 2,769,993 - +0.4 2,769,993 - -0.7 2,769,993 - -0.3
Or see this region's nucleotide sequence