Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2474 and Psest_2475 are separated by 174 nucleotides Psest_2475 and Psest_2476 are separated by 24 nucleotides
Psest_2474: Psest_2474 - AraC-type DNA-binding domain-containing proteins, at 2,643,741 to 2,644,784
_2474
Psest_2475: Psest_2475 - Acyl-CoA dehydrogenases, at 2,644,959 to 2,646,137
_2475
Psest_2476: Psest_2476 - acetyl-CoA acetyltransferases, at 2,646,162 to 2,647,358
_2476
Position (kb)
2644
2645
2646
2647 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2644.024 kb on + strand, within Psest_2474 at 2644.024 kb on + strand, within Psest_2474 at 2644.025 kb on - strand, within Psest_2474 at 2644.119 kb on + strand, within Psest_2474 at 2644.172 kb on - strand, within Psest_2474 at 2644.172 kb on - strand, within Psest_2474 at 2644.172 kb on - strand, within Psest_2474 at 2644.172 kb on - strand, within Psest_2474 at 2644.172 kb on - strand, within Psest_2474 at 2644.225 kb on + strand, within Psest_2474 at 2644.450 kb on + strand, within Psest_2474 at 2644.451 kb on - strand, within Psest_2474 at 2644.451 kb on - strand, within Psest_2474 at 2644.451 kb on - strand, within Psest_2474 at 2644.729 kb on + strand at 2644.729 kb on + strand at 2644.899 kb on - strand at 2644.902 kb on - strand at 2644.902 kb on - strand at 2644.902 kb on - strand at 2644.902 kb on - strand at 2645.213 kb on - strand, within Psest_2475 at 2645.213 kb on - strand, within Psest_2475 at 2645.277 kb on + strand, within Psest_2475 at 2645.277 kb on + strand, within Psest_2475 at 2645.277 kb on + strand, within Psest_2475 at 2645.452 kb on + strand, within Psest_2475 at 2645.452 kb on + strand, within Psest_2475 at 2645.688 kb on + strand, within Psest_2475 at 2645.778 kb on + strand, within Psest_2475 at 2645.779 kb on - strand, within Psest_2475 at 2645.779 kb on - strand, within Psest_2475 at 2645.779 kb on - strand, within Psest_2475 at 2645.779 kb on - strand, within Psest_2475 at 2645.881 kb on - strand, within Psest_2475 at 2646.045 kb on + strand at 2646.045 kb on + strand at 2646.045 kb on + strand at 2646.046 kb on - strand at 2646.072 kb on + strand at 2646.072 kb on + strand at 2646.072 kb on + strand at 2646.072 kb on + strand at 2646.072 kb on + strand at 2646.072 kb on + strand at 2646.072 kb on + strand at 2646.072 kb on + strand at 2646.072 kb on + strand at 2646.073 kb on - strand at 2646.073 kb on - strand at 2646.073 kb on - strand at 2646.073 kb on - strand at 2646.073 kb on - strand at 2646.073 kb on - strand at 2646.073 kb on - strand at 2646.249 kb on + strand at 2646.372 kb on + strand, within Psest_2476 at 2646.372 kb on + strand, within Psest_2476 at 2646.470 kb on - strand, within Psest_2476 at 2646.549 kb on + strand, within Psest_2476 at 2646.550 kb on - strand, within Psest_2476 at 2646.711 kb on + strand, within Psest_2476 at 2646.712 kb on - strand, within Psest_2476 at 2647.011 kb on + strand, within Psest_2476 at 2647.093 kb on + strand, within Psest_2476 at 2647.093 kb on + strand, within Psest_2476 at 2647.093 kb on + strand, within Psest_2476 at 2647.093 kb on + strand, within Psest_2476 at 2647.093 kb on + strand, within Psest_2476 at 2647.094 kb on - strand, within Psest_2476 at 2647.094 kb on - strand, within Psest_2476
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 2,644,024 + Psest_2474 0.27 +2.0 2,644,024 + Psest_2474 0.27 +1.5 2,644,025 - Psest_2474 0.27 -0.1 2,644,119 + Psest_2474 0.36 +1.0 2,644,172 - Psest_2474 0.41 +0.9 2,644,172 - Psest_2474 0.41 -0.2 2,644,172 - Psest_2474 0.41 -2.4 2,644,172 - Psest_2474 0.41 -2.4 2,644,172 - Psest_2474 0.41 -1.1 2,644,225 + Psest_2474 0.46 -0.1 2,644,450 + Psest_2474 0.68 +0.8 2,644,451 - Psest_2474 0.68 +0.1 2,644,451 - Psest_2474 0.68 +1.0 2,644,451 - Psest_2474 0.68 -0.3 2,644,729 + +0.0 2,644,729 + +0.1 2,644,899 - -0.5 2,644,902 - -0.1 2,644,902 - +0.4 2,644,902 - +0.6 2,644,902 - +0.3 2,645,213 - Psest_2475 0.22 -0.2 2,645,213 - Psest_2475 0.22 +0.2 2,645,277 + Psest_2475 0.27 -1.8 2,645,277 + Psest_2475 0.27 +0.3 2,645,277 + Psest_2475 0.27 -0.1 2,645,452 + Psest_2475 0.42 +0.8 2,645,452 + Psest_2475 0.42 -0.4 2,645,688 + Psest_2475 0.62 +0.1 2,645,778 + Psest_2475 0.69 +0.9 2,645,779 - Psest_2475 0.70 -0.3 2,645,779 - Psest_2475 0.70 +0.5 2,645,779 - Psest_2475 0.70 -0.4 2,645,779 - Psest_2475 0.70 +0.7 2,645,881 - Psest_2475 0.78 +0.2 2,646,045 + +1.2 2,646,045 + -0.2 2,646,045 + +0.1 2,646,046 - +1.8 2,646,072 + +0.3 2,646,072 + -0.1 2,646,072 + -0.6 2,646,072 + -1.1 2,646,072 + +0.4 2,646,072 + +0.0 2,646,072 + -0.3 2,646,072 + +0.9 2,646,072 + -0.2 2,646,073 - +0.2 2,646,073 - -1.6 2,646,073 - +0.9 2,646,073 - +0.6 2,646,073 - +0.4 2,646,073 - +0.6 2,646,073 - +1.0 2,646,249 + -0.7 2,646,372 + Psest_2476 0.18 +0.0 2,646,372 + Psest_2476 0.18 -0.4 2,646,470 - Psest_2476 0.26 +1.2 2,646,549 + Psest_2476 0.32 -2.2 2,646,550 - Psest_2476 0.32 -0.6 2,646,711 + Psest_2476 0.46 +0.2 2,646,712 - Psest_2476 0.46 -0.7 2,647,011 + Psest_2476 0.71 -0.1 2,647,093 + Psest_2476 0.78 +0.2 2,647,093 + Psest_2476 0.78 +1.1 2,647,093 + Psest_2476 0.78 +0.2 2,647,093 + Psest_2476 0.78 -1.6 2,647,093 + Psest_2476 0.78 -0.0 2,647,094 - Psest_2476 0.78 +0.6 2,647,094 - Psest_2476 0.78 -0.2
Or see this region's nucleotide sequence