Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2356 and Psest_2357 are separated by 1 nucleotides Psest_2357 and Psest_2358 overlap by 1 nucleotides Psest_2358 and Psest_2359 overlap by 4 nucleotides Psest_2359 and Psest_2360 overlap by 4 nucleotides
Psest_2356: Psest_2356 - Fatty acid desaturase, at 2,511,479 to 2,512,501
_2356
Psest_2357: Psest_2357 - Short-chain dehydrogenases of various substrate specificities, at 2,512,503 to 2,513,291
_2357
Psest_2358: Psest_2358 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,513,291 to 2,514,049
_2358
Psest_2359: Psest_2359 - Predicted permeases, at 2,514,046 to 2,514,930
_2359
Psest_2360: Psest_2360 - Uncharacterized protein, putative amidase, at 2,514,927 to 2,515,688
_2360
Position (kb)
2513
2514
2515 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2512.331 kb on + strand, within Psest_2356 at 2512.343 kb on + strand, within Psest_2356 at 2512.343 kb on + strand, within Psest_2356 at 2512.343 kb on + strand, within Psest_2356 at 2512.343 kb on + strand, within Psest_2356 at 2512.343 kb on + strand, within Psest_2356 at 2512.343 kb on + strand, within Psest_2356 at 2512.343 kb on + strand, within Psest_2356 at 2512.343 kb on + strand, within Psest_2356 at 2512.343 kb on + strand, within Psest_2356 at 2512.344 kb on - strand, within Psest_2356 at 2512.344 kb on - strand, within Psest_2356 at 2512.344 kb on - strand, within Psest_2356 at 2512.464 kb on - strand at 2512.522 kb on - strand at 2512.522 kb on - strand at 2512.522 kb on - strand at 2512.725 kb on + strand, within Psest_2357 at 2512.975 kb on - strand, within Psest_2357 at 2512.975 kb on - strand, within Psest_2357 at 2512.975 kb on - strand, within Psest_2357 at 2512.996 kb on + strand, within Psest_2357 at 2513.751 kb on - strand, within Psest_2358 at 2513.751 kb on - strand, within Psest_2358 at 2513.751 kb on - strand, within Psest_2358 at 2513.996 kb on + strand at 2513.996 kb on + strand at 2513.996 kb on + strand at 2513.996 kb on + strand at 2513.997 kb on - strand at 2514.169 kb on + strand, within Psest_2359 at 2514.169 kb on + strand, within Psest_2359 at 2514.170 kb on - strand, within Psest_2359 at 2514.337 kb on + strand, within Psest_2359 at 2514.337 kb on + strand, within Psest_2359 at 2514.338 kb on - strand, within Psest_2359 at 2514.338 kb on - strand, within Psest_2359 at 2514.338 kb on - strand, within Psest_2359
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 2,512,331 + Psest_2356 0.83 +0.0 2,512,343 + Psest_2356 0.84 -0.3 2,512,343 + Psest_2356 0.84 +0.0 2,512,343 + Psest_2356 0.84 +1.0 2,512,343 + Psest_2356 0.84 -0.6 2,512,343 + Psest_2356 0.84 -1.1 2,512,343 + Psest_2356 0.84 +0.3 2,512,343 + Psest_2356 0.84 +1.0 2,512,343 + Psest_2356 0.84 -1.0 2,512,343 + Psest_2356 0.84 +2.0 2,512,344 - Psest_2356 0.85 -2.1 2,512,344 - Psest_2356 0.85 -0.2 2,512,344 - Psest_2356 0.85 -2.4 2,512,464 - +0.3 2,512,522 - +0.9 2,512,522 - +0.8 2,512,522 - -0.0 2,512,725 + Psest_2357 0.28 +0.7 2,512,975 - Psest_2357 0.60 -1.0 2,512,975 - Psest_2357 0.60 -1.8 2,512,975 - Psest_2357 0.60 -1.0 2,512,996 + Psest_2357 0.62 +0.7 2,513,751 - Psest_2358 0.61 +0.8 2,513,751 - Psest_2358 0.61 -1.0 2,513,751 - Psest_2358 0.61 +0.0 2,513,996 + -0.3 2,513,996 + +0.5 2,513,996 + -0.6 2,513,996 + -0.6 2,513,997 - -0.9 2,514,169 + Psest_2359 0.14 +0.5 2,514,169 + Psest_2359 0.14 -1.1 2,514,170 - Psest_2359 0.14 -1.1 2,514,337 + Psest_2359 0.33 -1.6 2,514,337 + Psest_2359 0.33 +0.6 2,514,338 - Psest_2359 0.33 +1.0 2,514,338 - Psest_2359 0.33 -0.3 2,514,338 - Psest_2359 0.33 -2.3
Or see this region's nucleotide sequence