Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22000

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
2,279,879	-				-0.6
2,279,906	+				+0.1
2,279,906	+				-1.4
2,279,912	+				+0.4
2,279,912	+				+0.4
2,279,912	+				-0.6
2,279,912	+				+0.8
2,279,920	-				-0.9
2,279,920	-				-1.1
2,279,938	+				-1.9
2,279,938	+				-1.4
2,279,986	+				+0.8
2,280,053	+		PGA1_c21990	0.12	+0.6
2,280,179	+		PGA1_c21990	0.30	-1.6
2,280,214	-		PGA1_c21990	0.35	-0.4
2,280,233	+		PGA1_c21990	0.38	+0.2
2,280,312	-		PGA1_c21990	0.50	-0.0
2,280,336	-		PGA1_c21990	0.53	-1.1
2,280,338	-		PGA1_c21990	0.53	+0.4
2,280,423	+		PGA1_c21990	0.66	-0.1
2,280,543	+		PGA1_c21990	0.83	+0.0
2,280,661	-				-1.1
2,280,669	+				+0.4
2,280,677	-				-0.7
2,280,724	+				+1.1
2,280,839	-				-0.4
2,280,849	-				-0.8
2,280,911	+		PGA1_c22000	0.16	+1.8
2,280,919	-		PGA1_c22000	0.17	-1.4
2,280,937	+		PGA1_c22000	0.20	-0.6
2,280,987	+		PGA1_c22000	0.28	+0.8
2,281,002	+		PGA1_c22000	0.30	+0.7
2,281,010	-		PGA1_c22000	0.31	-0.6
2,281,055	-		PGA1_c22000	0.39	-1.6
2,281,055	-		PGA1_c22000	0.39	-1.9
2,281,091	+		PGA1_c22000	0.44	-0.8
2,281,091	+		PGA1_c22000	0.44	+1.0
2,281,091	+		PGA1_c22000	0.44	+1.0
2,281,091	+		PGA1_c22000	0.44	-1.4
2,281,099	-		PGA1_c22000	0.46	-1.0
2,281,099	-		PGA1_c22000	0.46	-0.1
2,281,099	-		PGA1_c22000	0.46	+1.0
2,281,115	+		PGA1_c22000	0.48	-0.5
2,281,273	+		PGA1_c22000	0.74	-0.4
2,281,273	+		PGA1_c22000	0.74	+0.1
2,281,273	+		PGA1_c22000	0.74	-1.8
2,281,273	+		PGA1_c22000	0.74	-0.8
2,281,273	+		PGA1_c22000	0.74	-1.1
2,281,273	+		PGA1_c22000	0.74	-0.6
2,281,273	+		PGA1_c22000	0.74	-0.4
2,281,273	+		PGA1_c22000	0.74	+1.4
2,281,273	+		PGA1_c22000	0.74	-1.3
2,281,273	+		PGA1_c22000	0.74	+0.6
2,281,281	-		PGA1_c22000	0.75	-0.4
2,281,281	-		PGA1_c22000	0.75	-0.2
2,281,281	-		PGA1_c22000	0.75	-1.5
2,281,281	-		PGA1_c22000	0.75	-3.3
2,281,281	-		PGA1_c22000	0.75	+0.4
2,281,281	-		PGA1_c22000	0.75	-0.2
2,281,281	-		PGA1_c22000	0.75	-0.1
2,281,298	+		PGA1_c22000	0.78	-1.6
2,281,372	-		PGA1_c22000	0.89	-0.4
2,281,475	+				-0.1
2,281,523	-				+0.4
2,281,523	-				+0.4
2,281,970	+				-0.1
2,281,974	+				+0.0
2,281,985	+				-0.1
2,282,022	+				+0.9
2,282,080	+				-0.6
2,282,093	-				-1.6
2,282,161	+				-0.4
2,282,267	+		PGA1_c22020	0.17	+0.9
2,282,297	-		PGA1_c22020	0.20	+0.4
2,282,348	-		PGA1_c22020	0.24	-0.7
2,282,374	+		PGA1_c22020	0.25	+1.3
2,282,382	-		PGA1_c22020	0.26	+0.1
2,282,389	-		PGA1_c22020	0.27	-1.6