Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1748 and HP15_1749 overlap by 8 nucleotides HP15_1749 and HP15_1750 overlap by 4 nucleotides
HP15_1748: HP15_1748 - cysteine/glutathione ABC transporter membrane/ATP-binding component, at 1,846,770 to 1,848,482
_1748
HP15_1749: HP15_1749 - transport ATP-binding protein CydC, at 1,848,475 to 1,850,091
_1749
HP15_1750: HP15_1750 - saccharopine dehydrogenase-like protein, at 1,850,088 to 1,851,329
_1750
Position (kb)
1848
1849
1850
1851 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1847.635 kb on + strand, within HP15_1748 at 1847.643 kb on - strand, within HP15_1748 at 1847.646 kb on + strand, within HP15_1748 at 1847.809 kb on + strand, within HP15_1748 at 1847.817 kb on - strand, within HP15_1748 at 1847.817 kb on - strand, within HP15_1748 at 1848.026 kb on - strand, within HP15_1748 at 1848.069 kb on + strand, within HP15_1748 at 1848.169 kb on - strand, within HP15_1748 at 1848.201 kb on - strand, within HP15_1748 at 1848.239 kb on - strand, within HP15_1748 at 1848.388 kb on + strand at 1848.401 kb on - strand at 1848.467 kb on + strand at 1848.475 kb on - strand at 1848.627 kb on + strand at 1848.707 kb on - strand, within HP15_1749 at 1848.717 kb on - strand, within HP15_1749 at 1848.717 kb on - strand, within HP15_1749 at 1848.823 kb on - strand, within HP15_1749 at 1848.833 kb on - strand, within HP15_1749 at 1848.918 kb on - strand, within HP15_1749 at 1849.035 kb on + strand, within HP15_1749 at 1849.035 kb on + strand, within HP15_1749 at 1849.123 kb on + strand, within HP15_1749 at 1849.185 kb on + strand, within HP15_1749 at 1849.193 kb on - strand, within HP15_1749 at 1849.233 kb on + strand, within HP15_1749 at 1849.234 kb on + strand, within HP15_1749 at 1849.294 kb on - strand, within HP15_1749 at 1849.304 kb on - strand, within HP15_1749 at 1849.365 kb on + strand, within HP15_1749 at 1849.365 kb on + strand, within HP15_1749 at 1849.365 kb on + strand, within HP15_1749 at 1849.373 kb on - strand, within HP15_1749 at 1849.565 kb on - strand, within HP15_1749 at 1849.565 kb on - strand, within HP15_1749 at 1849.688 kb on + strand, within HP15_1749 at 1849.696 kb on - strand, within HP15_1749 at 1849.826 kb on + strand, within HP15_1749 at 1849.830 kb on - strand, within HP15_1749 at 1849.935 kb on - strand at 1849.947 kb on + strand at 1850.173 kb on + strand at 1850.181 kb on - strand at 1850.181 kb on - strand at 1850.181 kb on - strand at 1850.187 kb on + strand at 1850.190 kb on - strand at 1850.525 kb on - strand, within HP15_1750 at 1850.559 kb on - strand, within HP15_1750 at 1850.570 kb on + strand, within HP15_1750 at 1850.600 kb on - strand, within HP15_1750 at 1850.608 kb on - strand, within HP15_1750 at 1850.794 kb on + strand, within HP15_1750 at 1850.926 kb on - strand, within HP15_1750 at 1850.995 kb on - strand, within HP15_1750 at 1851.001 kb on + strand, within HP15_1750 at 1851.019 kb on - strand, within HP15_1750 at 1851.027 kb on - strand, within HP15_1750 at 1851.086 kb on - strand, within HP15_1750
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 1,847,635 + HP15_1748 0.50 -2.1 1,847,643 - HP15_1748 0.51 -1.7 1,847,646 + HP15_1748 0.51 -3.1 1,847,809 + HP15_1748 0.61 -1.4 1,847,817 - HP15_1748 0.61 -2.8 1,847,817 - HP15_1748 0.61 -4.2 1,848,026 - HP15_1748 0.73 -1.3 1,848,069 + HP15_1748 0.76 -1.9 1,848,169 - HP15_1748 0.82 -2.4 1,848,201 - HP15_1748 0.84 -2.9 1,848,239 - HP15_1748 0.86 -3.8 1,848,388 + -2.8 1,848,401 - -3.5 1,848,467 + -0.7 1,848,475 - -3.5 1,848,627 + -3.1 1,848,707 - HP15_1749 0.14 -3.3 1,848,717 - HP15_1749 0.15 -3.4 1,848,717 - HP15_1749 0.15 -2.8 1,848,823 - HP15_1749 0.22 -2.3 1,848,833 - HP15_1749 0.22 -3.1 1,848,918 - HP15_1749 0.27 -2.2 1,849,035 + HP15_1749 0.35 -3.4 1,849,035 + HP15_1749 0.35 -1.9 1,849,123 + HP15_1749 0.40 -3.0 1,849,185 + HP15_1749 0.44 -3.4 1,849,193 - HP15_1749 0.44 -3.5 1,849,233 + HP15_1749 0.47 -3.5 1,849,234 + HP15_1749 0.47 +0.3 1,849,294 - HP15_1749 0.51 -1.9 1,849,304 - HP15_1749 0.51 -3.3 1,849,365 + HP15_1749 0.55 -2.5 1,849,365 + HP15_1749 0.55 +0.3 1,849,365 + HP15_1749 0.55 -4.5 1,849,373 - HP15_1749 0.56 -2.5 1,849,565 - HP15_1749 0.67 -1.5 1,849,565 - HP15_1749 0.67 -3.6 1,849,688 + HP15_1749 0.75 -3.5 1,849,696 - HP15_1749 0.76 -3.2 1,849,826 + HP15_1749 0.84 -3.4 1,849,830 - HP15_1749 0.84 -2.5 1,849,935 - -2.9 1,849,947 + -4.3 1,850,173 + +0.5 1,850,181 - +0.5 1,850,181 - -1.5 1,850,181 - -0.2 1,850,187 + +0.0 1,850,190 - +0.5 1,850,525 - HP15_1750 0.35 -0.8 1,850,559 - HP15_1750 0.38 -0.2 1,850,570 + HP15_1750 0.39 -0.9 1,850,600 - HP15_1750 0.41 -0.3 1,850,608 - HP15_1750 0.42 -0.9 1,850,794 + HP15_1750 0.57 +0.2 1,850,926 - HP15_1750 0.67 +0.0 1,850,995 - HP15_1750 0.73 -0.9 1,851,001 + HP15_1750 0.74 +0.1 1,851,019 - HP15_1750 0.75 -0.7 1,851,027 - HP15_1750 0.76 -0.4 1,851,086 - HP15_1750 0.80 +0.5
Or see this region's nucleotide sequence