Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17660

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
1,849,235	-		PGA1_c17640	0.56	+0.5
1,849,288	+		PGA1_c17640	0.71	-2.0
1,849,297	-		PGA1_c17640	0.74	-0.7
1,849,341	+		PGA1_c17640	0.86	-1.3
1,849,341	+		PGA1_c17640	0.86	-0.0
1,849,349	-		PGA1_c17640	0.89	-2.3
1,849,349	-		PGA1_c17640	0.89	+1.1
1,849,349	-		PGA1_c17640	0.89	+1.5
1,849,349	-		PGA1_c17640	0.89	-0.5
1,849,349	-		PGA1_c17640	0.89	-1.1
1,849,349	-		PGA1_c17640	0.89	+0.6
1,849,349	-		PGA1_c17640	0.89	+1.2
1,849,349	-		PGA1_c17640	0.89	+1.8
1,849,371	-				+1.2
1,849,381	-				-1.8
1,849,381	-				+0.5
1,849,466	-		PGA1_c17650	0.11	+2.1
1,849,503	+		PGA1_c17650	0.25	+0.8
1,849,507	-		PGA1_c17650	0.26	-0.1
1,849,511	-		PGA1_c17650	0.28	+0.5
1,849,511	-		PGA1_c17650	0.28	+0.1
1,849,535	-		PGA1_c17650	0.36	-0.7
1,849,565	+		PGA1_c17650	0.47	+1.2
1,849,565	+		PGA1_c17650	0.47	+1.5
1,849,615	-		PGA1_c17650	0.65	-1.1
1,849,683	+		PGA1_c17650	0.89	+1.1
1,849,683	+		PGA1_c17650	0.89	+0.9
1,849,687	-				-1.1
1,849,687	-				+0.0
1,849,690	+				+1.7
1,849,720	-				-0.3
1,849,766	-				-1.5
1,849,903	+				+0.4
1,849,919	-				+0.9
1,849,936	+				-2.5
1,849,936	+				+0.5
1,849,936	+				+0.5
1,849,936	+				+0.2
1,849,936	+				+1.1
1,849,936	+				+1.3
1,849,936	+				-0.1
1,849,936	+				+0.7
1,849,944	-				+0.8
1,849,944	-				-0.5
1,849,944	-				+2.8
1,849,944	-				-1.1
1,849,972	+				+0.5
1,850,032	+				-0.8
1,850,040	-				-0.8
1,850,055	+				+0.5
1,850,058	-				+0.9
1,850,060	+				-0.7
1,850,063	-				+1.0
1,850,074	+				+1.2
1,850,111	-				-1.1
1,850,159	-				+0.5
1,850,254	+		PGA1_c17660	0.13	-1.1
1,850,262	-		PGA1_c17660	0.17	-0.8
1,850,278	-		PGA1_c17660	0.26	-0.5
1,850,278	-		PGA1_c17660	0.26	+0.1
1,850,282	-		PGA1_c17660	0.28	-0.0
1,850,297	+		PGA1_c17660	0.36	-2.3
1,850,406	+				-1.1
1,850,414	-				-0.1
1,850,460	-				-0.5
1,850,460	-				-1.1
1,850,460	-				+0.9
1,850,496	-				+0.5
1,850,609	+		PGA1_c17670	0.18	+0.3
1,850,609	+		PGA1_c17670	0.18	+0.7
1,850,627	-		PGA1_c17670	0.20	-1.1
1,850,676	+		PGA1_c17670	0.26	-1.1
1,850,676	+		PGA1_c17670	0.26	-2.1
1,850,676	+		PGA1_c17670	0.26	-1.5
1,850,697	-		PGA1_c17670	0.29	+0.1
1,850,831	-		PGA1_c17670	0.47	-2.1
1,850,831	-		PGA1_c17670	0.47	-1.4
1,850,831	-		PGA1_c17670	0.47	+0.1
1,850,840	+		PGA1_c17670	0.48	-0.5
1,850,845	+		PGA1_c17670	0.49	-0.5
1,850,848	-		PGA1_c17670	0.49	-1.0
1,850,912	+		PGA1_c17670	0.58	-0.5
1,850,924	+		PGA1_c17670	0.59	-0.7
1,850,924	+		PGA1_c17670	0.59	+0.5
1,850,924	+		PGA1_c17670	0.59	+0.5
1,850,924	+		PGA1_c17670	0.59	-0.1
1,850,924	+		PGA1_c17670	0.59	+1.7
1,850,924	+		PGA1_c17670	0.59	+0.5
1,850,924	+		PGA1_c17670	0.59	+1.7
1,850,924	+		PGA1_c17670	0.59	+2.5
1,850,924	+		PGA1_c17670	0.59	+1.1
1,850,924	+		PGA1_c17670	0.59	-1.0
1,850,924	+		PGA1_c17670	0.59	-1.1
1,850,932	-		PGA1_c17670	0.60	+0.8
1,850,932	-		PGA1_c17670	0.60	-0.5
1,850,932	-		PGA1_c17670	0.60	-3.0
1,850,932	-		PGA1_c17670	0.60	+0.8
1,850,932	-		PGA1_c17670	0.60	+1.5
1,850,932	-		PGA1_c17670	0.60	-0.2
1,850,932	-		PGA1_c17670	0.60	+1.1
1,850,932	-		PGA1_c17670	0.60	-0.2
1,850,932	-		PGA1_c17670	0.60	-0.5
1,850,932	-		PGA1_c17670	0.60	-0.5
1,850,932	-		PGA1_c17670	0.60	-1.1
1,850,932	-		PGA1_c17670	0.60	-1.1
1,850,932	-		PGA1_c17670	0.60	+2.5
1,850,934	+		PGA1_c17670	0.60	+1.5
1,850,939	+		PGA1_c17670	0.61	+0.2
1,850,939	+		PGA1_c17670	0.61	+1.5
1,850,939	+		PGA1_c17670	0.61	-0.1
1,850,939	+		PGA1_c17670	0.61	-1.1
1,850,939	+		PGA1_c17670	0.61	+1.8
1,850,949	+		PGA1_c17670	0.62	+0.5
1,850,957	-		PGA1_c17670	0.64	+1.6
1,851,053	-		PGA1_c17670	0.76	+0.8
1,851,134	+		PGA1_c17670	0.87	+1.2
1,851,134	-		PGA1_c17670	0.87	-0.2
1,851,134	-		PGA1_c17670	0.87	-0.2
1,851,222	-				-1.1
1,851,222	-				+0.5
1,851,223	-				+1.0
1,851,249	+				-0.8
1,851,249	+				+1.5
1,851,249	+				+0.5
1,851,249	+				-1.3
1,851,249	+				+1.2
1,851,249	+				+0.7
1,851,249	+				+1.5
1,851,249	+				+0.1
1,851,252	-				+1.2
1,851,252	-				+0.7
1,851,254	+				+1.1
1,851,257	-				+0.8
1,851,257	-				+1.7
1,851,257	-				+0.5
1,851,257	-				+0.1
1,851,257	-				+0.5
1,851,259	+				-0.5
1,851,270	+				+1.5
1,851,270	+				+2.1
1,851,270	+				+1.2
1,851,270	+				-1.1
1,851,278	-				+1.7
1,851,311	-				+0.8
1,851,388	-		PGA1_c17680	0.12	-0.7