Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1687 and Psest_1688 are separated by 14 nucleotides Psest_1688 and Psest_1689 are separated by 192 nucleotides Psest_1689 and Psest_1690 are separated by 172 nucleotides
Psest_1687: Psest_1687 - malonyl CoA-acyl carrier protein transacylase, at 1,795,384 to 1,796,322
_1687
Psest_1688: Psest_1688 - 3-oxoacyl-(acyl-carrier-protein) reductase, at 1,796,337 to 1,797,080
_1688
Psest_1689: Psest_1689 - acyl carrier protein, at 1,797,273 to 1,797,509
_1689
Psest_1690: Psest_1690 - beta-ketoacyl-acyl-carrier-protein synthase II, at 1,797,682 to 1,798,926
_1690
Position (kb)
1796
1797
1798 Strain fitness (log2 ratio)
-2
-1
0
1 at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.126 kb on + strand at 1797.126 kb on + strand at 1797.130 kb on + strand at 1797.130 kb on + strand at 1797.130 kb on + strand at 1797.130 kb on + strand at 1797.132 kb on + strand at 1797.132 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.507 kb on + strand at 1797.514 kb on + strand at 1797.662 kb on + strand at 1797.666 kb on + strand at 1797.666 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 1,797,069 + +0.6 1,797,069 + +1.1 1,797,069 + -0.9 1,797,069 + +0.6 1,797,069 + +0.7 1,797,069 + +0.9 1,797,069 + -0.4 1,797,069 + -1.5 1,797,069 + -0.8 1,797,069 + +0.5 1,797,069 + -0.3 1,797,069 + -0.4 1,797,069 + -0.1 1,797,126 + -1.7 1,797,126 + +1.3 1,797,130 + +0.4 1,797,130 + +0.1 1,797,130 + -0.1 1,797,130 + -0.7 1,797,132 + +0.9 1,797,132 + -0.6 1,797,217 + +0.5 1,797,217 + +1.1 1,797,217 + +0.1 1,797,217 + -1.9 1,797,217 + +1.5 1,797,219 + -0.0 1,797,219 + +0.9 1,797,219 + +1.6 1,797,219 + -0.5 1,797,219 + -1.2 1,797,507 + +0.3 1,797,514 + +0.4 1,797,662 + +0.6 1,797,666 + +0.5 1,797,666 + +0.3 1,797,668 + -0.6 1,797,668 + -0.5 1,797,668 + +1.1 1,797,668 + +0.1 1,797,668 + -0.8
Or see this region's nucleotide sequence