Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16190

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
1,680,574	+		PGA1_c16180	0.40	-1.2
1,680,574	+		PGA1_c16180	0.40	-0.4
1,680,574	+		PGA1_c16180	0.40	-1.1
1,680,582	-		PGA1_c16180	0.41	+0.3
1,680,582	-		PGA1_c16180	0.41	+0.5
1,680,604	-		PGA1_c16180	0.43	+1.7
1,680,689	-		PGA1_c16180	0.52	-0.7
1,680,799	+		PGA1_c16180	0.63	+1.2
1,680,950	-		PGA1_c16180	0.79	-0.5
1,681,094	-				-2.3
1,681,139	+				-0.1
1,681,149	+				+0.3
1,681,157	-				-0.2
1,681,157	-				-2.1
1,681,158	-				-0.5
1,681,227	-				+0.3
1,681,289	+				+2.1
1,681,296	-				-1.5
1,681,323	-				-3.2
1,681,325	+				+0.5
1,681,326	+				+0.3
1,681,333	-				+0.5
1,681,333	-				-1.1
1,681,366	-				+0.8
1,681,372	-				-1.6
1,681,423	-				-0.0
1,681,468	-				-0.5
1,681,473	+				+0.3
1,681,535	-		PGA1_c16190	0.33	-1.7
1,681,535	-		PGA1_c16190	0.33	-1.3
1,681,557	-		PGA1_c16190	0.46	-1.2
1,681,713	-				+2.3
1,681,747	+				+0.7
1,681,747	+				-0.0
1,681,836	+				+0.2
1,681,913	+				+0.1
1,681,914	-				-0.3
1,681,920	+				-1.7
1,681,921	-				+0.5
1,681,928	-				-0.1
1,682,091	+		PGA1_c16200	0.27	-0.6
1,682,098	+		PGA1_c16200	0.28	+0.1
1,682,113	+		PGA1_c16200	0.30	+0.8
1,682,135	+		PGA1_c16200	0.33	+1.0
1,682,156	+		PGA1_c16200	0.35	+0.8
1,682,156	+		PGA1_c16200	0.35	-1.2
1,682,164	-		PGA1_c16200	0.36	-0.5
1,682,188	+		PGA1_c16200	0.39	+1.0
1,682,204	+		PGA1_c16200	0.40	+0.7
1,682,204	+		PGA1_c16200	0.40	-0.6
1,682,212	-		PGA1_c16200	0.41	-0.5
1,682,267	-		PGA1_c16200	0.48	+2.2
1,682,285	+		PGA1_c16200	0.50	-0.8
1,682,338	+		PGA1_c16200	0.56	-1.0
1,682,338	+		PGA1_c16200	0.56	+0.3
1,682,338	+		PGA1_c16200	0.56	-0.6
1,682,351	-		PGA1_c16200	0.57	+1.2
1,682,372	+		PGA1_c16200	0.60	-0.2
1,682,372	+		PGA1_c16200	0.60	+0.3
1,682,380	-		PGA1_c16200	0.61	+0.2
1,682,380	-		PGA1_c16200	0.61	+0.5
1,682,380	-		PGA1_c16200	0.61	+0.4
1,682,380	-		PGA1_c16200	0.61	-0.3
1,682,414	-		PGA1_c16200	0.65	-1.1
1,682,426	+		PGA1_c16200	0.66	+0.9
1,682,524	+		PGA1_c16200	0.77	-1.3
1,682,524	+		PGA1_c16200	0.77	+1.3
1,682,524	+		PGA1_c16200	0.77	+0.8
1,682,529	+		PGA1_c16200	0.78	+0.8
1,682,532	-		PGA1_c16200	0.78	+0.0
1,682,581	+		PGA1_c16200	0.84	-0.5