Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1438 and Psest_1439 are separated by 4 nucleotides Psest_1439 and Psest_1440 are separated by 261 nucleotides
Psest_1438: Psest_1438 - Transcriptional regulator, at 1,548,456 to 1,549,415
_1438
Psest_1439: Psest_1439 - Transcriptional regulator, at 1,549,420 to 1,550,091
_1439
Psest_1440: Psest_1440 - Nucleoside-binding outer membrane protein, at 1,550,353 to 1,551,168
_1440
Position (kb)
1549
1550
1551 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1548.432 kb on + strand at 1548.432 kb on + strand at 1548.433 kb on - strand at 1548.433 kb on - strand at 1548.433 kb on - strand at 1548.565 kb on + strand, within Psest_1438 at 1548.566 kb on - strand, within Psest_1438 at 1548.566 kb on - strand, within Psest_1438 at 1548.583 kb on + strand, within Psest_1438 at 1548.583 kb on + strand, within Psest_1438 at 1548.583 kb on + strand, within Psest_1438 at 1548.583 kb on + strand, within Psest_1438 at 1548.584 kb on - strand, within Psest_1438 at 1548.584 kb on - strand, within Psest_1438 at 1548.584 kb on - strand, within Psest_1438 at 1548.641 kb on + strand, within Psest_1438 at 1549.144 kb on - strand, within Psest_1438 at 1549.144 kb on - strand, within Psest_1438 at 1549.376 kb on - strand at 1549.376 kb on - strand at 1549.376 kb on - strand at 1549.785 kb on - strand, within Psest_1439 at 1549.785 kb on - strand, within Psest_1439 at 1549.877 kb on + strand, within Psest_1439 at 1549.877 kb on + strand, within Psest_1439 at 1549.877 kb on + strand, within Psest_1439 at 1549.877 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.901 kb on + strand, within Psest_1439 at 1549.902 kb on - strand, within Psest_1439 at 1549.902 kb on - strand, within Psest_1439 at 1549.902 kb on - strand, within Psest_1439 at 1549.902 kb on - strand, within Psest_1439 at 1549.902 kb on - strand, within Psest_1439 at 1549.902 kb on - strand, within Psest_1439 at 1549.904 kb on + strand, within Psest_1439 at 1549.905 kb on - strand, within Psest_1439 at 1549.905 kb on - strand, within Psest_1439 at 1550.060 kb on + strand at 1550.444 kb on + strand, within Psest_1440 at 1550.444 kb on + strand, within Psest_1440 at 1550.444 kb on + strand, within Psest_1440 at 1550.445 kb on - strand, within Psest_1440 at 1550.445 kb on - strand, within Psest_1440 at 1550.459 kb on + strand, within Psest_1440 at 1550.460 kb on - strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.480 kb on + strand, within Psest_1440 at 1550.481 kb on - strand, within Psest_1440 at 1550.481 kb on - strand, within Psest_1440 at 1550.481 kb on - strand, within Psest_1440 at 1550.498 kb on + strand, within Psest_1440 at 1550.498 kb on + strand, within Psest_1440 at 1550.498 kb on + strand, within Psest_1440 at 1550.498 kb on + strand, within Psest_1440 at 1550.499 kb on - strand, within Psest_1440 at 1550.499 kb on - strand, within Psest_1440 at 1550.522 kb on + strand, within Psest_1440 at 1550.522 kb on + strand, within Psest_1440 at 1550.522 kb on + strand, within Psest_1440 at 1550.522 kb on + strand, within Psest_1440 at 1550.523 kb on - strand, within Psest_1440 at 1550.601 kb on + strand, within Psest_1440 at 1550.601 kb on + strand, within Psest_1440 at 1550.604 kb on - strand, within Psest_1440 at 1550.604 kb on - strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.714 kb on + strand, within Psest_1440 at 1550.715 kb on - strand, within Psest_1440 at 1550.715 kb on - strand, within Psest_1440 at 1550.715 kb on - strand, within Psest_1440 at 1550.715 kb on - strand, within Psest_1440 at 1550.715 kb on - strand, within Psest_1440 at 1550.715 kb on - strand, within Psest_1440 at 1550.777 kb on + strand, within Psest_1440 at 1550.777 kb on + strand, within Psest_1440 at 1550.777 kb on + strand, within Psest_1440 at 1550.777 kb on + strand, within Psest_1440 at 1550.777 kb on + strand, within Psest_1440 at 1550.777 kb on + strand, within Psest_1440 at 1550.777 kb on + strand, within Psest_1440 at 1550.778 kb on - strand, within Psest_1440 at 1550.778 kb on - strand, within Psest_1440 at 1550.822 kb on + strand, within Psest_1440 at 1550.822 kb on + strand, within Psest_1440 at 1550.822 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.918 kb on + strand, within Psest_1440 at 1550.919 kb on - strand, within Psest_1440 at 1550.919 kb on - strand, within Psest_1440 at 1550.919 kb on - strand, within Psest_1440 at 1550.919 kb on - strand, within Psest_1440 at 1550.951 kb on + strand, within Psest_1440 at 1550.951 kb on + strand, within Psest_1440 at 1550.951 kb on + strand, within Psest_1440 at 1550.951 kb on + strand, within Psest_1440 at 1550.952 kb on - strand, within Psest_1440 at 1551.050 kb on + strand, within Psest_1440 at 1551.050 kb on + strand, within Psest_1440 at 1551.050 kb on + strand, within Psest_1440 at 1551.050 kb on + strand, within Psest_1440 at 1551.051 kb on - strand, within Psest_1440 at 1551.051 kb on - strand, within Psest_1440 at 1551.051 kb on - strand, within Psest_1440 at 1551.062 kb on + strand, within Psest_1440 at 1551.063 kb on - strand, within Psest_1440 at 1551.069 kb on - strand, within Psest_1440 at 1551.069 kb on - strand, within Psest_1440 at 1551.069 kb on - strand, within Psest_1440
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 1,548,432 + -1.1 1,548,432 + +0.2 1,548,433 - +0.1 1,548,433 - +0.3 1,548,433 - +4.1 1,548,565 + Psest_1438 0.11 -1.5 1,548,566 - Psest_1438 0.11 -0.1 1,548,566 - Psest_1438 0.11 +1.0 1,548,583 + Psest_1438 0.13 -0.4 1,548,583 + Psest_1438 0.13 +0.3 1,548,583 + Psest_1438 0.13 +0.0 1,548,583 + Psest_1438 0.13 -0.2 1,548,584 - Psest_1438 0.13 +0.4 1,548,584 - Psest_1438 0.13 +0.6 1,548,584 - Psest_1438 0.13 -0.6 1,548,641 + Psest_1438 0.19 +0.5 1,549,144 - Psest_1438 0.72 +0.1 1,549,144 - Psest_1438 0.72 -0.3 1,549,376 - -1.0 1,549,376 - -0.2 1,549,376 - -0.3 1,549,785 - Psest_1439 0.54 -0.3 1,549,785 - Psest_1439 0.54 -1.1 1,549,877 + Psest_1439 0.68 -1.7 1,549,877 + Psest_1439 0.68 -0.5 1,549,877 + Psest_1439 0.68 -1.2 1,549,877 + Psest_1439 0.68 -0.5 1,549,901 + Psest_1439 0.72 -0.9 1,549,901 + Psest_1439 0.72 -1.6 1,549,901 + Psest_1439 0.72 -0.5 1,549,901 + Psest_1439 0.72 -1.5 1,549,901 + Psest_1439 0.72 -1.1 1,549,901 + Psest_1439 0.72 +1.4 1,549,901 + Psest_1439 0.72 +1.1 1,549,901 + Psest_1439 0.72 -0.2 1,549,901 + Psest_1439 0.72 -0.8 1,549,901 + Psest_1439 0.72 +0.1 1,549,901 + Psest_1439 0.72 +0.1 1,549,901 + Psest_1439 0.72 +1.5 1,549,901 + Psest_1439 0.72 -1.9 1,549,901 + Psest_1439 0.72 -0.5 1,549,901 + Psest_1439 0.72 -1.1 1,549,902 - Psest_1439 0.72 +0.5 1,549,902 - Psest_1439 0.72 -1.7 1,549,902 - Psest_1439 0.72 -1.5 1,549,902 - Psest_1439 0.72 -0.4 1,549,902 - Psest_1439 0.72 -0.5 1,549,902 - Psest_1439 0.72 -0.9 1,549,904 + Psest_1439 0.72 -1.0 1,549,905 - Psest_1439 0.72 -0.9 1,549,905 - Psest_1439 0.72 -2.0 1,550,060 + -0.6 1,550,444 + Psest_1440 0.11 -1.0 1,550,444 + Psest_1440 0.11 +0.8 1,550,444 + Psest_1440 0.11 +0.2 1,550,445 - Psest_1440 0.11 +0.3 1,550,445 - Psest_1440 0.11 -1.2 1,550,459 + Psest_1440 0.13 -0.1 1,550,460 - Psest_1440 0.13 -2.3 1,550,480 + Psest_1440 0.16 +0.4 1,550,480 + Psest_1440 0.16 +0.5 1,550,480 + Psest_1440 0.16 -1.0 1,550,480 + Psest_1440 0.16 +0.1 1,550,480 + Psest_1440 0.16 -0.5 1,550,480 + Psest_1440 0.16 +0.5 1,550,480 + Psest_1440 0.16 -0.2 1,550,480 + Psest_1440 0.16 +0.2 1,550,480 + Psest_1440 0.16 +1.0 1,550,480 + Psest_1440 0.16 +1.5 1,550,480 + Psest_1440 0.16 -0.5 1,550,480 + Psest_1440 0.16 -1.2 1,550,480 + Psest_1440 0.16 +1.3 1,550,480 + Psest_1440 0.16 +0.5 1,550,481 - Psest_1440 0.16 +1.9 1,550,481 - Psest_1440 0.16 +0.8 1,550,481 - Psest_1440 0.16 +1.4 1,550,498 + Psest_1440 0.18 -0.1 1,550,498 + Psest_1440 0.18 -0.6 1,550,498 + Psest_1440 0.18 +0.4 1,550,498 + Psest_1440 0.18 -0.0 1,550,499 - Psest_1440 0.18 +0.2 1,550,499 - Psest_1440 0.18 -0.7 1,550,522 + Psest_1440 0.21 -0.2 1,550,522 + Psest_1440 0.21 +1.6 1,550,522 + Psest_1440 0.21 +0.5 1,550,522 + Psest_1440 0.21 -1.7 1,550,523 - Psest_1440 0.21 -1.7 1,550,601 + Psest_1440 0.30 +0.9 1,550,601 + Psest_1440 0.30 -0.1 1,550,604 - Psest_1440 0.31 -0.3 1,550,604 - Psest_1440 0.31 -0.1 1,550,714 + Psest_1440 0.44 +0.2 1,550,714 + Psest_1440 0.44 +0.0 1,550,714 + Psest_1440 0.44 +0.9 1,550,714 + Psest_1440 0.44 +1.8 1,550,714 + Psest_1440 0.44 -0.3 1,550,714 + Psest_1440 0.44 -0.3 1,550,714 + Psest_1440 0.44 +0.1 1,550,714 + Psest_1440 0.44 +0.5 1,550,714 + Psest_1440 0.44 +0.1 1,550,714 + Psest_1440 0.44 +0.3 1,550,714 + Psest_1440 0.44 +0.9 1,550,715 - Psest_1440 0.44 +0.1 1,550,715 - Psest_1440 0.44 -0.2 1,550,715 - Psest_1440 0.44 -0.7 1,550,715 - Psest_1440 0.44 -0.9 1,550,715 - Psest_1440 0.44 +1.6 1,550,715 - Psest_1440 0.44 -0.7 1,550,777 + Psest_1440 0.52 -0.6 1,550,777 + Psest_1440 0.52 +0.3 1,550,777 + Psest_1440 0.52 +0.6 1,550,777 + Psest_1440 0.52 +1.0 1,550,777 + Psest_1440 0.52 +0.9 1,550,777 + Psest_1440 0.52 +1.9 1,550,777 + Psest_1440 0.52 -0.2 1,550,778 - Psest_1440 0.52 +0.7 1,550,778 - Psest_1440 0.52 +1.2 1,550,822 + Psest_1440 0.57 -0.6 1,550,822 + Psest_1440 0.57 -2.3 1,550,822 + Psest_1440 0.57 -0.5 1,550,918 + Psest_1440 0.69 +1.3 1,550,918 + Psest_1440 0.69 -2.5 1,550,918 + Psest_1440 0.69 +0.4 1,550,918 + Psest_1440 0.69 +0.2 1,550,918 + Psest_1440 0.69 -0.4 1,550,918 + Psest_1440 0.69 +0.5 1,550,918 + Psest_1440 0.69 +0.1 1,550,918 + Psest_1440 0.69 -0.3 1,550,918 + Psest_1440 0.69 -0.6 1,550,918 + Psest_1440 0.69 +0.6 1,550,918 + Psest_1440 0.69 +0.2 1,550,918 + Psest_1440 0.69 +0.0 1,550,919 - Psest_1440 0.69 -0.7 1,550,919 - Psest_1440 0.69 -0.1 1,550,919 - Psest_1440 0.69 +0.6 1,550,919 - Psest_1440 0.69 -1.9 1,550,951 + Psest_1440 0.73 +0.5 1,550,951 + Psest_1440 0.73 -0.6 1,550,951 + Psest_1440 0.73 -1.5 1,550,951 + Psest_1440 0.73 -0.5 1,550,952 - Psest_1440 0.73 +0.4 1,551,050 + Psest_1440 0.85 -0.4 1,551,050 + Psest_1440 0.85 +0.8 1,551,050 + Psest_1440 0.85 +0.0 1,551,050 + Psest_1440 0.85 -0.7 1,551,051 - Psest_1440 0.86 +0.0 1,551,051 - Psest_1440 0.86 +1.1 1,551,051 - Psest_1440 0.86 +0.2 1,551,062 + Psest_1440 0.87 +1.5 1,551,063 - Psest_1440 0.87 -0.3 1,551,069 - Psest_1440 0.88 -0.7 1,551,069 - Psest_1440 0.88 +0.2 1,551,069 - Psest_1440 0.88 -0.2
Or see this region's nucleotide sequence