Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34560

Experiment: m.b. Vancomycin 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.032 mg/ml
3,623,201	+				+0.8
3,623,202	+				+0.5
3,623,202	+				-0.4
3,623,202	+				+0.9
3,623,202	+				+0.8
3,623,202	+				-0.3
3,623,209	-				+1.1
3,623,210	-				+1.0
3,623,210	-				+0.6
3,623,251	-				-0.4
3,623,251	-				+1.8
3,623,278	+				+0.5
3,623,288	+				+1.6
3,623,288	+				-0.1
3,623,288	+				+1.1
3,623,288	+				+0.4
3,623,288	+				-0.7
3,623,288	+				-3.9
3,623,288	+				-0.3
3,623,288	+				+0.7
3,623,288	+				+1.2
3,623,288	+				-0.3
3,623,288	+				+1.1
3,623,288	+				+0.4
3,623,288	+				-1.3
3,623,288	+				+0.4
3,623,296	-				+1.1
3,623,296	-				+0.1
3,623,296	-				+1.4
3,623,296	-				-0.1
3,623,296	-				-0.8
3,623,296	-				+1.2
3,623,296	-				+0.1
3,623,296	-				+2.1
3,623,326	+				+0.7
3,623,327	-				-0.3
3,623,384	+				+0.4
3,623,403	-				-2.6
3,623,477	+		PGA1_c34550	0.18	+0.3
3,623,477	+		PGA1_c34550	0.18	-2.7
3,623,485	-		PGA1_c34550	0.19	-0.3
3,623,617	-		PGA1_c34550	0.36	-1.4
3,623,642	+		PGA1_c34550	0.39	-1.2
3,623,650	-		PGA1_c34550	0.40	+0.3
3,623,650	-		PGA1_c34550	0.40	+2.7
3,623,674	+		PGA1_c34550	0.43	-0.6
3,623,731	+		PGA1_c34550	0.51	+0.7
3,623,731	+		PGA1_c34550	0.51	-1.1
3,623,731	+		PGA1_c34550	0.51	+1.2
3,623,738	-		PGA1_c34550	0.52	-0.5
3,623,739	-		PGA1_c34550	0.52	+1.0
3,623,741	+		PGA1_c34550	0.52	-0.4
3,623,786	-		PGA1_c34550	0.58	-0.8
3,623,797	-		PGA1_c34550	0.59	-0.2
3,623,826	+		PGA1_c34550	0.63	-1.3
3,623,859	+		PGA1_c34550	0.67	-1.8
3,623,866	-		PGA1_c34550	0.68	+0.6
3,623,866	-		PGA1_c34550	0.68	+0.2
3,623,866	-		PGA1_c34550	0.68	-0.8
3,623,866	-		PGA1_c34550	0.68	-0.9
3,623,877	-		PGA1_c34550	0.70	+0.4
3,624,051	+				+0.7
3,624,101	+				-2.0
3,624,108	-				-1.6
3,624,108	-				+0.5
3,624,110	+				-1.5
3,624,157	+				+2.5
3,624,157	+				+2.6
3,624,173	-				+1.8
3,624,179	+				+2.4
3,624,309	+		PGA1_c34560	0.13	+1.4
3,624,317	-		PGA1_c34560	0.13	+1.7
3,624,366	+		PGA1_c34560	0.16	+1.8
3,624,387	+		PGA1_c34560	0.18	+2.3
3,624,421	+		PGA1_c34560	0.20	-1.4
3,624,475	-		PGA1_c34560	0.23	+1.7
3,624,776	+		PGA1_c34560	0.43	+0.8
3,624,776	+		PGA1_c34560	0.43	+2.6
3,624,784	-		PGA1_c34560	0.43	+2.8
3,624,784	-		PGA1_c34560	0.43	+0.8
3,624,784	-		PGA1_c34560	0.43	+0.1
3,624,784	-		PGA1_c34560	0.43	+1.5
3,624,858	-		PGA1_c34560	0.48	+2.7
3,624,862	+		PGA1_c34560	0.48	+1.2
3,624,886	+		PGA1_c34560	0.50	+1.8
3,624,886	+		PGA1_c34560	0.50	+1.6
3,624,894	-		PGA1_c34560	0.50	+0.7
3,624,903	+		PGA1_c34560	0.51	+0.5
3,624,930	-		PGA1_c34560	0.53	+1.6
3,624,955	-		PGA1_c34560	0.54	+2.6
3,624,991	+		PGA1_c34560	0.56	+2.1
3,624,994	-		PGA1_c34560	0.57	+2.7
3,624,996	+		PGA1_c34560	0.57	+1.5
3,625,022	-		PGA1_c34560	0.58	+1.2
3,625,050	+		PGA1_c34560	0.60	+2.5
3,625,070	+		PGA1_c34560	0.62	+1.1
3,625,072	-		PGA1_c34560	0.62	+0.4
3,625,112	+		PGA1_c34560	0.64	+1.6
3,625,119	+		PGA1_c34560	0.65	+1.7
3,625,120	-		PGA1_c34560	0.65	+0.9
3,625,122	-		PGA1_c34560	0.65	+0.8
3,625,201	-		PGA1_c34560	0.70	+1.2
3,625,286	+		PGA1_c34560	0.75	+0.7
3,625,286	+		PGA1_c34560	0.75	+1.7
3,625,294	-		PGA1_c34560	0.76	+3.2
3,625,359	+		PGA1_c34560	0.80	+2.4
3,625,359	+		PGA1_c34560	0.80	+1.1
3,625,367	+		PGA1_c34560	0.81	-0.8
3,625,367	-		PGA1_c34560	0.81	+0.8
3,625,375	-		PGA1_c34560	0.81	+0.6
3,625,379	+		PGA1_c34560	0.81	+3.0
3,625,385	+		PGA1_c34560	0.82	+2.9
3,625,392	+		PGA1_c34560	0.82	+1.6
3,625,426	-		PGA1_c34560	0.84	+1.1
3,625,446	+		PGA1_c34560	0.86	+2.1
3,625,446	+		PGA1_c34560	0.86	+2.2
3,625,446	+		PGA1_c34560	0.86	+2.3
3,625,446	+		PGA1_c34560	0.86	+2.2
3,625,446	+		PGA1_c34560	0.86	+3.1
3,625,446	+		PGA1_c34560	0.86	+2.4
3,625,446	+		PGA1_c34560	0.86	+2.2
3,625,446	+		PGA1_c34560	0.86	+2.3
3,625,446	+		PGA1_c34560	0.86	+1.3
3,625,446	+		PGA1_c34560	0.86	+1.5
3,625,454	-		PGA1_c34560	0.86	+1.5
3,625,454	-		PGA1_c34560	0.86	+2.1
3,625,454	-		PGA1_c34560	0.86	+2.2
3,625,454	-		PGA1_c34560	0.86	+2.0
3,625,454	-		PGA1_c34560	0.86	+2.5
3,625,454	-		PGA1_c34560	0.86	+2.6
3,625,454	-		PGA1_c34560	0.86	+2.4
3,625,454	-		PGA1_c34560	0.86	+2.3
3,625,454	-		PGA1_c34560	0.86	+1.1
3,625,454	-		PGA1_c34560	0.86	+2.2
3,625,454	-		PGA1_c34560	0.86	+3.2
3,625,454	-		PGA1_c34560	0.86	-0.3
3,625,456	+		PGA1_c34560	0.86	+2.1
3,625,471	+		PGA1_c34560	0.87	+2.4
3,625,476	+		PGA1_c34560	0.88	+0.1
3,625,476	+		PGA1_c34560	0.88	+2.1
3,625,476	+		PGA1_c34560	0.88	+0.9
3,625,476	+		PGA1_c34560	0.88	+1.8
3,625,479	-		PGA1_c34560	0.88	+1.9
3,625,484	-		PGA1_c34560	0.88	+2.4
3,625,484	-		PGA1_c34560	0.88	+0.3
3,625,505	+		PGA1_c34560	0.89	+2.9
3,625,558	+				+1.5
3,625,558	+				+3.1
3,625,566	-				+2.5
3,625,566	-				-0.8
3,625,566	-				+1.6
3,625,597	-				+0.9
3,625,597	-				+2.8
3,625,615	+				-0.5
3,625,635	+				+0.9
3,625,635	-				+1.1
3,625,640	+				+2.7
3,625,640	+				+1.8
3,625,640	+				+1.7
3,625,640	+				+2.6
3,625,648	-				+1.3
3,625,665	-				+0.9
3,625,757	+				+0.7
3,625,765	-				+1.6
3,625,765	-				+0.7
3,625,782	+				+1.1
3,625,782	+				-0.3
3,625,782	+				+1.5
3,625,782	+				+1.5
3,625,782	+				+0.6
3,625,782	+				+1.1
3,625,790	-		PGA1_c34570	0.10	+0.1
3,625,790	-		PGA1_c34570	0.10	+1.2
3,625,790	-		PGA1_c34570	0.10	+1.0
3,625,790	-		PGA1_c34570	0.10	+1.1
3,625,790	-		PGA1_c34570	0.10	+1.5
3,625,790	-		PGA1_c34570	0.10	+1.9
3,625,790	-		PGA1_c34570	0.10	+2.4
3,625,790	-		PGA1_c34570	0.10	+1.7
3,625,820	-		PGA1_c34570	0.14	+1.1
3,625,886	-		PGA1_c34570	0.21	+1.5
3,625,891	+		PGA1_c34570	0.21	+1.8
3,625,891	+		PGA1_c34570	0.21	+2.5
3,625,891	+		PGA1_c34570	0.21	+2.0
3,625,891	+		PGA1_c34570	0.21	+1.4
3,625,899	-		PGA1_c34570	0.22	-1.2
3,625,899	-		PGA1_c34570	0.22	+0.6
3,625,909	-		PGA1_c34570	0.23	+1.7
3,625,919	+		PGA1_c34570	0.24	+0.8
3,625,919	+		PGA1_c34570	0.24	+1.4
3,625,919	+		PGA1_c34570	0.24	+0.9
3,625,919	+		PGA1_c34570	0.24	-1.4
3,625,927	-		PGA1_c34570	0.25	+0.6
3,625,927	-		PGA1_c34570	0.25	+0.8
3,625,927	-		PGA1_c34570	0.25	+0.1
3,625,927	-		PGA1_c34570	0.25	+1.4
3,625,927	-		PGA1_c34570	0.25	+1.1
3,625,927	-		PGA1_c34570	0.25	+0.5
3,625,927	-		PGA1_c34570	0.25	-1.8
3,625,927	-		PGA1_c34570	0.25	+1.0
3,625,966	+		PGA1_c34570	0.30	-0.8
3,625,974	-		PGA1_c34570	0.30	+1.5
3,626,006	+		PGA1_c34570	0.34	+1.2
3,626,008	-		PGA1_c34570	0.34	+1.6
3,626,014	-		PGA1_c34570	0.35	+0.6
3,626,026	+		PGA1_c34570	0.36	+1.3
3,626,026	+		PGA1_c34570	0.36	+1.0
3,626,026	+		PGA1_c34570	0.36	+1.4
3,626,026	+		PGA1_c34570	0.36	+0.8
3,626,026	+		PGA1_c34570	0.36	+1.0
3,626,026	+		PGA1_c34570	0.36	+1.2
3,626,026	+		PGA1_c34570	0.36	+0.3
3,626,026	+		PGA1_c34570	0.36	+1.3
3,626,026	+		PGA1_c34570	0.36	-1.5
3,626,026	+		PGA1_c34570	0.36	+0.6
3,626,026	+		PGA1_c34570	0.36	-0.9
3,626,026	+		PGA1_c34570	0.36	-0.8
3,626,026	+		PGA1_c34570	0.36	+1.3
3,626,026	+		PGA1_c34570	0.36	+0.6
3,626,026	+		PGA1_c34570	0.36	+2.0
3,626,026	+		PGA1_c34570	0.36	-0.9
3,626,026	+		PGA1_c34570	0.36	+0.6
3,626,034	-		PGA1_c34570	0.37	-0.3
3,626,034	-		PGA1_c34570	0.37	+0.4
3,626,034	-		PGA1_c34570	0.37	+1.4
3,626,034	-		PGA1_c34570	0.37	+1.7
3,626,034	-		PGA1_c34570	0.37	-0.8
3,626,034	-		PGA1_c34570	0.37	-0.6
3,626,034	-		PGA1_c34570	0.37	-0.2
3,626,034	-		PGA1_c34570	0.37	-0.5
3,626,066	-		PGA1_c34570	0.40	-0.3
3,626,086	-		PGA1_c34570	0.43	-0.0
3,626,182	+		PGA1_c34570	0.53	+0.2
3,626,182	+		PGA1_c34570	0.53	-0.0
3,626,182	+		PGA1_c34570	0.53	+0.8
3,626,182	+		PGA1_c34570	0.53	-1.9
3,626,190	-		PGA1_c34570	0.54	+2.4
3,626,190	-		PGA1_c34570	0.54	+0.4
3,626,190	-		PGA1_c34570	0.54	+2.0
3,626,194	+		PGA1_c34570	0.54	+0.1
3,626,284	-		PGA1_c34570	0.64	+0.4
3,626,305	+		PGA1_c34570	0.66	+1.1
3,626,351	-		PGA1_c34570	0.71	+1.1
3,626,421	+		PGA1_c34570	0.79	-0.5
3,626,450	+		PGA1_c34570	0.82	-0.2
3,626,511	+		PGA1_c34570	0.89	-1.9
3,626,518	+		PGA1_c34570	0.89	+0.8
3,626,573	-				-0.9
3,626,590	+				-2.6
3,626,590	+				-0.2
3,626,590	+				+0.8
3,626,590	+				+2.0
3,626,590	+				-0.1
3,626,590	+				+0.1
3,626,590	+				+0.4
3,626,590	+				-1.3
3,626,590	+				+0.2
3,626,590	+				+0.6
3,626,590	+				-0.8
3,626,590	+				-1.3
3,626,590	+				+1.6
3,626,590	+				-0.2
3,626,590	+				+0.2
3,626,590	+				-0.4
3,626,590	+				-0.1
3,626,590	+				-0.0
3,626,590	+				+0.1
3,626,590	+				-0.2
3,626,590	+				+1.4
3,626,590	+				+0.1
3,626,590	+				-0.3
3,626,590	+				+0.2
3,626,590	+				-1.2
3,626,590	+				+0.3
3,626,590	+				+0.5
3,626,590	+				-1.1
3,626,590	+				+0.6
3,626,590	+				+1.6
3,626,598	-				+0.3
3,626,598	-				-0.2
3,626,598	-				+0.7
3,626,598	-				-0.1
3,626,598	-				+0.7
3,626,598	-				+1.0
3,626,598	-				-0.8
3,626,598	-				+1.0
3,626,598	-				+0.6
3,626,598	-				-1.2
3,626,598	-				+0.8
3,626,598	-				+1.0
3,626,598	-				+1.5
3,626,598	-				-0.9
3,626,598	-				+1.2
3,626,598	-				+0.4
3,626,598	-				+1.7
3,626,598	-				+0.5
3,626,598	-				+1.3
3,626,646	-				+1.5