Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33090

Experiment: m.b. Vancomycin 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.032 mg/ml
3,466,221	+		PGA1_c33070	0.85	+2.1
3,466,226	-		PGA1_c33070	0.86	+0.9
3,466,241	-		PGA1_c33070	0.88	+2.1
3,466,364	-				+0.4
3,466,364	-				+1.1
3,466,408	+				+1.3
3,466,470	+		PGA1_c33080	0.17	-0.2
3,466,473	-		PGA1_c33080	0.18	+0.5
3,466,473	-		PGA1_c33080	0.18	-0.0
3,466,473	-		PGA1_c33080	0.18	+1.4
3,466,564	+		PGA1_c33080	0.31	+0.3
3,466,602	+		PGA1_c33080	0.37	-0.0
3,466,675	+		PGA1_c33080	0.48	+1.0
3,466,683	-		PGA1_c33080	0.50	+0.3
3,466,756	+		PGA1_c33080	0.61	+1.0
3,466,764	-		PGA1_c33080	0.62	+0.4
3,466,783	+		PGA1_c33080	0.65	+0.1
3,466,804	+		PGA1_c33080	0.68	-1.9
3,466,806	-		PGA1_c33080	0.69	+3.6
3,466,812	-		PGA1_c33080	0.69	-0.0
3,466,812	-		PGA1_c33080	0.69	+1.1
3,466,876	-		PGA1_c33080	0.79	-0.4
3,466,891	+		PGA1_c33080	0.81	+0.5
3,466,913	+		PGA1_c33080	0.85	+0.2
3,466,918	+		PGA1_c33080	0.86	+0.8
3,466,918	+		PGA1_c33080	0.86	-0.8
3,466,918	+		PGA1_c33080	0.86	-0.6
3,466,938	+		PGA1_c33080	0.89	+0.4
3,466,967	+				+0.4
3,467,002	+				+0.3
3,467,012	+				+0.4
3,467,025	-				-1.2
3,467,088	+				-2.0
3,467,091	+				+0.9
3,467,110	+				-0.6
3,467,146	+				+0.5
3,467,146	+				-1.6
3,467,180	-				+1.0
3,467,180	-				-0.0
3,467,195	+		PGA1_c33090	0.11	-0.5
3,467,195	+		PGA1_c33090	0.11	+1.3
3,467,209	+		PGA1_c33090	0.14	-2.0
3,467,263	+		PGA1_c33090	0.27	+0.4
3,467,263	+		PGA1_c33090	0.27	-1.1
3,467,271	-		PGA1_c33090	0.29	+0.5
3,467,271	-		PGA1_c33090	0.29	-1.0
3,467,409	+		PGA1_c33090	0.63	-0.3
3,467,414	+		PGA1_c33090	0.64	-0.4
3,467,414	+		PGA1_c33090	0.64	+3.0
3,467,414	+		PGA1_c33090	0.64	+1.0
3,467,417	-		PGA1_c33090	0.64	-0.6
3,467,422	-		PGA1_c33090	0.66	-1.9
3,467,436	-		PGA1_c33090	0.69	-2.1
3,467,460	-		PGA1_c33090	0.75	-1.0
3,467,461	+		PGA1_c33090	0.75	+0.6
3,467,467	-		PGA1_c33090	0.77	+1.0
3,467,482	+		PGA1_c33090	0.80	+0.4
3,467,520	+		PGA1_c33090	0.89	+1.3
3,467,520	+		PGA1_c33090	0.89	-2.5
3,467,520	+		PGA1_c33090	0.89	-1.3
3,467,557	+				+0.2
3,467,560	-				+1.0
3,467,567	-				-1.2
3,467,575	-				-2.2
3,467,643	+				-1.5
3,467,695	+				+0.3
3,467,703	-				-0.4
3,467,736	+		PGA1_c33095	0.13	+0.0
3,467,736	-		PGA1_c33095	0.13	-2.0
3,467,795	-		PGA1_c33095	0.20	+0.2
3,467,802	+		PGA1_c33095	0.21	+1.0
3,467,802	+		PGA1_c33095	0.21	+0.4
3,467,806	-		PGA1_c33095	0.22	+0.3
3,467,828	+		PGA1_c33095	0.24	-0.0
3,467,833	+		PGA1_c33095	0.25	+1.3
3,467,963	+		PGA1_c33095	0.41	+0.8
3,467,963	+		PGA1_c33095	0.41	+2.0
3,467,968	+		PGA1_c33095	0.41	-1.6
3,467,971	-		PGA1_c33095	0.42	+0.3
3,467,973	+		PGA1_c33095	0.42	+0.4
3,467,976	-		PGA1_c33095	0.42	+0.1
3,467,981	-		PGA1_c33095	0.43	+0.7
3,467,981	-		PGA1_c33095	0.43	-0.5
3,467,981	-		PGA1_c33095	0.43	+0.2
3,468,007	-		PGA1_c33095	0.46	-2.0
3,468,025	+		PGA1_c33095	0.48	-2.3
3,468,145	+		PGA1_c33095	0.63	+0.2
3,468,153	-		PGA1_c33095	0.64	-0.7
3,468,158	-		PGA1_c33095	0.64	+1.7
3,468,170	+		PGA1_c33095	0.66	+0.7
3,468,178	-		PGA1_c33095	0.67	-0.6
3,468,209	-		PGA1_c33095	0.70	-0.0
3,468,209	-		PGA1_c33095	0.70	-0.4
3,468,209	-		PGA1_c33095	0.70	+0.4
3,468,230	-		PGA1_c33095	0.73	-1.4
3,468,240	+		PGA1_c33095	0.74	-1.3
3,468,335	+				+2.0
3,468,378	+				+0.8
3,468,396	-				-0.3
3,468,502	+		PGA1_c33100	0.24	-1.1
3,468,528	-		PGA1_c33100	0.27	+2.0