Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28820

Experiment: m.b. Vancomycin 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.032 mg/ml
3,020,753	+		PGA1_c28810	0.46	+2.6
3,020,753	+		PGA1_c28810	0.46	-0.6
3,020,753	+		PGA1_c28810	0.46	+2.5
3,020,753	+		PGA1_c28810	0.46	-2.7
3,020,753	+		PGA1_c28810	0.46	-0.7
3,020,753	+		PGA1_c28810	0.46	+0.9
3,020,753	+		PGA1_c28810	0.46	+1.3
3,020,753	+		PGA1_c28810	0.46	+1.0
3,020,753	+		PGA1_c28810	0.46	+0.3
3,020,753	+		PGA1_c28810	0.46	+0.9
3,020,761	-		PGA1_c28810	0.46	-1.4
3,020,761	-		PGA1_c28810	0.46	-1.1
3,020,761	-		PGA1_c28810	0.46	-1.4
3,020,761	-		PGA1_c28810	0.46	+0.1
3,020,761	-		PGA1_c28810	0.46	+0.2
3,020,761	-		PGA1_c28810	0.46	+0.2
3,020,869	+		PGA1_c28810	0.53	+0.9
3,020,972	+		PGA1_c28810	0.60	-1.3
3,021,011	-		PGA1_c28810	0.63	-2.1
3,021,029	+		PGA1_c28810	0.64	+1.1
3,021,029	+		PGA1_c28810	0.64	-1.3
3,021,083	+		PGA1_c28810	0.68	-1.1
3,021,107	+		PGA1_c28810	0.70	-0.7
3,021,138	-		PGA1_c28810	0.72	-1.9
3,021,139	-		PGA1_c28810	0.72	+1.9
3,021,170	+		PGA1_c28810	0.74	-2.7
3,021,175	+		PGA1_c28810	0.74	-0.3
3,021,220	+		PGA1_c28810	0.77	+0.1
3,021,238	+		PGA1_c28810	0.78	-0.1
3,021,245	-		PGA1_c28810	0.79	+1.0
3,021,295	-		PGA1_c28810	0.82	+1.5
3,021,309	+		PGA1_c28810	0.83	-0.1
3,021,315	+		PGA1_c28810	0.84	+0.3
3,021,363	-		PGA1_c28810	0.87	-1.4
3,021,405	+		PGA1_c28810	0.90	-0.4
3,021,645	-				-0.6
3,021,668	-				-0.4
3,021,684	+				+0.0
3,021,694	+				-1.1
3,021,762	+				+0.9
3,021,811	-				+1.9
3,021,873	+				-1.3
3,021,890	+				-0.1
3,021,893	-				-1.4
3,021,920	+				+1.1
3,021,920	+				+0.2
3,021,951	-		PGA1_c28820	0.11	+0.0
3,021,985	+		PGA1_c28820	0.13	-0.7
3,022,062	-		PGA1_c28820	0.18	-1.8
3,022,114	-		PGA1_c28820	0.21	+0.5
3,022,133	-		PGA1_c28820	0.22	-1.1
3,022,163	+		PGA1_c28820	0.23	-0.7
3,022,163	+		PGA1_c28820	0.23	-2.1
3,022,163	+		PGA1_c28820	0.23	-1.9
3,022,163	+		PGA1_c28820	0.23	+1.9
3,022,163	+		PGA1_c28820	0.23	-1.4
3,022,163	+		PGA1_c28820	0.23	+1.6
3,022,171	-		PGA1_c28820	0.24	-2.1
3,022,171	-		PGA1_c28820	0.24	-0.4
3,022,171	-		PGA1_c28820	0.24	-1.4
3,022,171	-		PGA1_c28820	0.24	-1.7
3,022,219	-		PGA1_c28820	0.26	+0.9
3,022,251	+		PGA1_c28820	0.28	-0.1
3,022,352	+		PGA1_c28820	0.34	-1.7
3,022,352	+		PGA1_c28820	0.34	-1.0
3,022,367	+		PGA1_c28820	0.35	+0.2
3,022,367	+		PGA1_c28820	0.35	+0.5
3,022,370	-		PGA1_c28820	0.35	-1.9
3,022,378	+		PGA1_c28820	0.35	+0.9
3,022,386	-		PGA1_c28820	0.36	+0.7
3,022,409	-		PGA1_c28820	0.37	+0.3
3,022,409	-		PGA1_c28820	0.37	+0.1
3,022,426	-		PGA1_c28820	0.38	-0.8
3,022,504	+		PGA1_c28820	0.43	-1.4
3,022,531	+		PGA1_c28820	0.44	+0.1
3,022,539	-		PGA1_c28820	0.44	+0.8
3,022,577	-		PGA1_c28820	0.47	+0.3
3,022,602	-		PGA1_c28820	0.48	+0.7
3,022,629	+		PGA1_c28820	0.50	-1.9
3,022,667	-		PGA1_c28820	0.52	-1.0
3,022,857	+		PGA1_c28820	0.62	+1.9
3,022,865	-		PGA1_c28820	0.63	-2.1
3,022,893	+		PGA1_c28820	0.64	-0.7
3,022,901	-		PGA1_c28820	0.65	-1.4
3,022,930	-		PGA1_c28820	0.66	+0.9
3,022,935	+		PGA1_c28820	0.67	-0.3
3,022,959	-		PGA1_c28820	0.68	+0.3
3,022,998	-		PGA1_c28820	0.70	-0.5
3,023,001	+		PGA1_c28820	0.70	-1.7
3,023,009	-		PGA1_c28820	0.71	+0.9
3,023,009	-		PGA1_c28820	0.71	-0.2
3,023,009	-		PGA1_c28820	0.71	+0.9
3,023,009	-		PGA1_c28820	0.71	-1.1
3,023,052	+		PGA1_c28820	0.73	+0.9
3,023,060	-		PGA1_c28820	0.74	-1.3
3,023,160	+		PGA1_c28820	0.79	+0.6
3,023,190	+		PGA1_c28820	0.81	-2.3
3,023,198	-		PGA1_c28820	0.82	-1.8
3,023,203	+		PGA1_c28820	0.82	+1.0
3,023,230	+		PGA1_c28820	0.83	-1.9
3,023,287	+		PGA1_c28820	0.87	+0.5
3,023,306	+		PGA1_c28820	0.88	-2.2
3,023,318	+		PGA1_c28820	0.88	-1.2
3,023,318	+		PGA1_c28820	0.88	+1.1
3,023,319	-		PGA1_c28820	0.88	-1.5
3,023,319	-		PGA1_c28820	0.88	+0.9
3,023,326	-		PGA1_c28820	0.89	+0.4
3,023,356	+				+1.6
3,023,410	+				-0.1
3,023,418	-				-2.3
3,023,435	-				+4.2
3,023,513	+				+0.5
3,023,526	-				+1.0
3,023,526	-				+0.6
3,023,596	+				+2.0
3,023,604	-				+0.9
3,023,692	-		PGA1_c28830	0.22	+0.9
3,023,697	-		PGA1_c28830	0.22	-1.4
3,023,725	-		PGA1_c28830	0.26	-0.3
3,023,788	+		PGA1_c28830	0.35	-1.7
3,023,822	+		PGA1_c28830	0.39	-0.1
3,023,864	+		PGA1_c28830	0.45	-1.1
3,023,901	-		PGA1_c28830	0.50	-2.1
3,023,935	-		PGA1_c28830	0.54	-0.1
3,023,948	-		PGA1_c28830	0.56	+0.9
3,023,949	-		PGA1_c28830	0.56	-0.1
3,023,979	-		PGA1_c28830	0.60	-0.7
3,024,061	+		PGA1_c28830	0.71	+1.6
3,024,095	+		PGA1_c28830	0.76	+0.4
3,024,103	-		PGA1_c28830	0.77	-0.2
3,024,158	-		PGA1_c28830	0.84	+2.2
3,024,190	-		PGA1_c28830	0.88	+2.8
3,024,220	+				+0.6
3,024,238	+				+0.1
3,024,385	-				-1.9
3,024,480	+		PGA1_c28840	0.18	-1.1
3,024,520	-		PGA1_c28840	0.21	-1.1