Strain Fitness in Marinobacter adhaerens HP15 around HP15_1747

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1746 and HP15_1747 are separated by 2 nucleotidesHP15_1747 and HP15_1748 are separated by 0 nucleotides HP15_1746: HP15_1746 - cytochrome d ubiquinol oxidase subunit I, at 1,844,323 to 1,845,765 _1746 HP15_1747: HP15_1747 - cytochrome d ubiquinol oxidase, subunit II, at 1,845,768 to 1,846,769 _1747 HP15_1748: HP15_1748 - cysteine/glutathione ABC transporter membrane/ATP-binding component, at 1,846,770 to 1,848,482 _1748 Position (kb) 1845 1846 1847Strain fitness (log2 ratio) -3 -2 -1 0 1at 1844.825 kb on - strand, within HP15_1746at 1844.930 kb on + strand, within HP15_1746at 1844.987 kb on - strand, within HP15_1746at 1845.025 kb on + strand, within HP15_1746at 1845.287 kb on - strand, within HP15_1746at 1845.504 kb on + strand, within HP15_1746at 1845.540 kb on + strand, within HP15_1746at 1845.548 kb on - strand, within HP15_1746at 1845.579 kb on - strand, within HP15_1746at 1845.635 kb on + strandat 1845.706 kb on + strandat 1845.834 kb on - strandat 1845.842 kb on - strandat 1845.892 kb on - strand, within HP15_1747at 1846.212 kb on - strand, within HP15_1747at 1846.239 kb on - strand, within HP15_1747at 1846.441 kb on + strand, within HP15_1747at 1846.481 kb on - strand, within HP15_1747at 1846.557 kb on - strand, within HP15_1747at 1846.581 kb on + strand, within HP15_1747at 1846.617 kb on + strand, within HP15_1747at 1846.703 kb on + strandat 1846.758 kb on + strandat 1846.758 kb on + strandat 1846.912 kb on - strandat 1846.973 kb on + strand, within HP15_1748at 1846.988 kb on + strand, within HP15_1748at 1847.010 kb on - strand, within HP15_1748at 1847.167 kb on + strand, within HP15_1748at 1847.333 kb on - strand, within HP15_1748at 1847.387 kb on + strand, within HP15_1748at 1847.454 kb on - strand, within HP15_1748at 1847.635 kb on + strand, within HP15_1748at 1847.643 kb on - strand, within HP15_1748at 1847.646 kb on + strand, within HP15_1748

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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1,844,825 - HP15_1746 0.35 -1.1
1,844,930 + HP15_1746 0.42 -0.7
1,844,987 - HP15_1746 0.46 -2.5
1,845,025 + HP15_1746 0.49 -0.2
1,845,287 - HP15_1746 0.67 -0.5
1,845,504 + HP15_1746 0.82 -1.5
1,845,540 + HP15_1746 0.84 -0.8
1,845,548 - HP15_1746 0.85 -0.1
1,845,579 - HP15_1746 0.87 -1.4
1,845,635 + -0.5
1,845,706 + -0.4
1,845,834 - -2.3
1,845,842 - -1.8
1,845,892 - HP15_1747 0.12 -1.5
1,846,212 - HP15_1747 0.44 -1.4
1,846,239 - HP15_1747 0.47 +0.5
1,846,441 + HP15_1747 0.67 -0.8
1,846,481 - HP15_1747 0.71 -1.3
1,846,557 - HP15_1747 0.79 -2.6
1,846,581 + HP15_1747 0.81 -0.5
1,846,617 + HP15_1747 0.85 -1.8
1,846,703 + -0.6
1,846,758 + -1.8
1,846,758 + -2.8
1,846,912 - -0.8
1,846,973 + HP15_1748 0.12 -0.7
1,846,988 + HP15_1748 0.13 -1.1
1,847,010 - HP15_1748 0.14 -1.1
1,847,167 + HP15_1748 0.23 -0.9
1,847,333 - HP15_1748 0.33 -1.5
1,847,387 + HP15_1748 0.36 +0.0
1,847,454 - HP15_1748 0.40 -1.2
1,847,635 + HP15_1748 0.50 -0.8
1,847,643 - HP15_1748 0.51 +0.5
1,847,646 + HP15_1748 0.51 -0.5

Or see this region's nucleotide sequence