Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1746 and HP15_1747 are separated by 2 nucleotides HP15_1747 and HP15_1748 are separated by 0 nucleotides
HP15_1746: HP15_1746 - cytochrome d ubiquinol oxidase subunit I, at 1,844,323 to 1,845,765
_1746
HP15_1747: HP15_1747 - cytochrome d ubiquinol oxidase, subunit II, at 1,845,768 to 1,846,769
_1747
HP15_1748: HP15_1748 - cysteine/glutathione ABC transporter membrane/ATP-binding component, at 1,846,770 to 1,848,482
_1748
Position (kb)
1845
1846
1847 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1844.825 kb on - strand, within HP15_1746 at 1844.930 kb on + strand, within HP15_1746 at 1844.987 kb on - strand, within HP15_1746 at 1845.025 kb on + strand, within HP15_1746 at 1845.287 kb on - strand, within HP15_1746 at 1845.504 kb on + strand, within HP15_1746 at 1845.540 kb on + strand, within HP15_1746 at 1845.548 kb on - strand, within HP15_1746 at 1845.579 kb on - strand, within HP15_1746 at 1845.635 kb on + strand at 1845.706 kb on + strand at 1845.834 kb on - strand at 1845.842 kb on - strand at 1845.892 kb on - strand, within HP15_1747 at 1846.212 kb on - strand, within HP15_1747 at 1846.239 kb on - strand, within HP15_1747 at 1846.441 kb on + strand, within HP15_1747 at 1846.481 kb on - strand, within HP15_1747 at 1846.557 kb on - strand, within HP15_1747 at 1846.581 kb on + strand, within HP15_1747 at 1846.617 kb on + strand, within HP15_1747 at 1846.703 kb on + strand at 1846.758 kb on + strand at 1846.758 kb on + strand at 1846.912 kb on - strand at 1846.973 kb on + strand, within HP15_1748 at 1846.988 kb on + strand, within HP15_1748 at 1847.010 kb on - strand, within HP15_1748 at 1847.167 kb on + strand, within HP15_1748 at 1847.333 kb on - strand, within HP15_1748 at 1847.387 kb on + strand, within HP15_1748 at 1847.454 kb on - strand, within HP15_1748 at 1847.635 kb on + strand, within HP15_1748 at 1847.643 kb on - strand, within HP15_1748 at 1847.646 kb on + strand, within HP15_1748
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 1,844,825 - HP15_1746 0.35 -1.1 1,844,930 + HP15_1746 0.42 -0.7 1,844,987 - HP15_1746 0.46 -2.5 1,845,025 + HP15_1746 0.49 -0.2 1,845,287 - HP15_1746 0.67 -0.5 1,845,504 + HP15_1746 0.82 -1.5 1,845,540 + HP15_1746 0.84 -0.8 1,845,548 - HP15_1746 0.85 -0.1 1,845,579 - HP15_1746 0.87 -1.4 1,845,635 + -0.5 1,845,706 + -0.4 1,845,834 - -2.3 1,845,842 - -1.8 1,845,892 - HP15_1747 0.12 -1.5 1,846,212 - HP15_1747 0.44 -1.4 1,846,239 - HP15_1747 0.47 +0.5 1,846,441 + HP15_1747 0.67 -0.8 1,846,481 - HP15_1747 0.71 -1.3 1,846,557 - HP15_1747 0.79 -2.6 1,846,581 + HP15_1747 0.81 -0.5 1,846,617 + HP15_1747 0.85 -1.8 1,846,703 + -0.6 1,846,758 + -1.8 1,846,758 + -2.8 1,846,912 - -0.8 1,846,973 + HP15_1748 0.12 -0.7 1,846,988 + HP15_1748 0.13 -1.1 1,847,010 - HP15_1748 0.14 -1.1 1,847,167 + HP15_1748 0.23 -0.9 1,847,333 - HP15_1748 0.33 -1.5 1,847,387 + HP15_1748 0.36 +0.0 1,847,454 - HP15_1748 0.40 -1.2 1,847,635 + HP15_1748 0.50 -0.8 1,847,643 - HP15_1748 0.51 +0.5 1,847,646 + HP15_1748 0.51 -0.5
Or see this region's nucleotide sequence