Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c01220

Experiment: m.b. Vancomycin 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.032 mg/ml
113,063	+				-1.6
113,063	+				-1.6
113,063	+				-1.1
113,071	-				-0.8
113,071	-				-2.7
113,105	-				-4.2
113,117	+				-3.2
113,117	+				-3.6
113,217	+		PGA1_c01210	0.16	-3.3
113,265	+		PGA1_c01210	0.21	-2.1
113,349	+		PGA1_c01210	0.31	-0.4
113,357	-		PGA1_c01210	0.32	-3.0
113,372	+		PGA1_c01210	0.33	-3.8
113,441	-		PGA1_c01210	0.41	-3.2
113,457	-		PGA1_c01210	0.43	-1.9
113,474	+		PGA1_c01210	0.45	-4.5
113,479	+		PGA1_c01210	0.45	-3.3
113,482	-		PGA1_c01210	0.46	-2.8
113,507	-		PGA1_c01210	0.49	-1.7
113,571	-		PGA1_c01210	0.56	-1.1
113,814	+		PGA1_c01210	0.83	-3.6
113,912	+				-2.1
113,950	+				-3.4
114,027	-				-0.8
114,027	-				+1.2
114,242	+		PGA1_c01220	0.21	-0.8
114,313	+		PGA1_c01220	0.29	+0.2
114,313	+		PGA1_c01220	0.29	-1.4
114,411	-		PGA1_c01220	0.40	+1.3
114,433	-		PGA1_c01220	0.43	+0.8
114,433	-		PGA1_c01220	0.43	+1.0
114,436	+		PGA1_c01220	0.43	-2.0
114,447	+		PGA1_c01220	0.45	+0.3
114,452	+		PGA1_c01220	0.45	+0.6
114,452	+		PGA1_c01220	0.45	-0.3
114,466	+		PGA1_c01220	0.47	-0.0
114,474	-		PGA1_c01220	0.48	-0.3
114,520	+		PGA1_c01220	0.53	+0.9
114,520	+		PGA1_c01220	0.53	-0.4
114,530	+		PGA1_c01220	0.54	-1.1
114,530	+		PGA1_c01220	0.54	+0.9
114,538	-		PGA1_c01220	0.55	-0.7
114,649	-		PGA1_c01220	0.68	+0.5
114,649	-		PGA1_c01220	0.68	+0.7
114,649	-		PGA1_c01220	0.68	+0.1
114,649	-		PGA1_c01220	0.68	-0.1
114,651	+		PGA1_c01220	0.68	-2.4
114,704	+		PGA1_c01220	0.74	-2.0
114,704	+		PGA1_c01220	0.74	-0.3
114,712	-		PGA1_c01220	0.75	+0.4
114,712	-		PGA1_c01220	0.75	-1.1
114,723	-		PGA1_c01220	0.76	+2.2
114,760	-		PGA1_c01220	0.80	-0.6
114,779	-		PGA1_c01220	0.82	+1.4
114,904	-				-0.2
114,904	-				+0.2
114,935	-				+1.2
114,969	-				-1.1
114,970	-				+0.7
114,985	+				+1.0
114,987	+				+0.3
114,987	+				+0.8
115,037	+				-0.7
115,045	+				+0.2
115,052	+				-1.4
115,053	-				-1.7
115,057	+				-3.3
115,060	-				-2.9
115,065	-				-1.3
115,070	-				-1.4
115,093	-				-0.4
115,097	+				-0.5
115,107	-				+1.1
115,118	-				+0.6
115,130	+				-3.0
115,130	+				-2.8
115,130	+				-3.1
115,137	+				-2.3
115,173	+		PGA1_c01230	0.10	+0.0
115,212	+		PGA1_c01230	0.15	+1.4
115,212	+		PGA1_c01230	0.15	-2.6
115,212	+		PGA1_c01230	0.15	+0.6
115,212	+		PGA1_c01230	0.15	-0.4
115,212	+		PGA1_c01230	0.15	-3.5
115,220	-		PGA1_c01230	0.16	+0.9
115,220	-		PGA1_c01230	0.16	+0.7
115,227	-		PGA1_c01230	0.17	-1.9
115,289	+		PGA1_c01230	0.24	-0.5
115,291	+		PGA1_c01230	0.25	-0.7
115,292	-		PGA1_c01230	0.25	-0.8
115,297	-		PGA1_c01230	0.25	-1.8
115,320	-		PGA1_c01230	0.28	-2.2
115,360	+		PGA1_c01230	0.33	-1.2
115,368	-		PGA1_c01230	0.34	+0.3
115,421	+		PGA1_c01230	0.41	-0.9
115,442	+		PGA1_c01230	0.43	-2.8
115,452	+		PGA1_c01230	0.44	-2.7
115,476	-		PGA1_c01230	0.47	-1.3
115,585	+		PGA1_c01230	0.60	-1.6
115,619	+		PGA1_c01230	0.65	-0.1
115,619	+		PGA1_c01230	0.65	-2.7
115,619	+		PGA1_c01230	0.65	-2.8
115,622	-		PGA1_c01230	0.65	-0.1
115,627	-		PGA1_c01230	0.66	-2.9
115,627	-		PGA1_c01230	0.66	-0.8
115,627	-		PGA1_c01230	0.66	+0.3
115,627	-		PGA1_c01230	0.66	-2.1
115,715	-		PGA1_c01230	0.76	-1.6
115,809	+		PGA1_c01230	0.88	+0.2
115,819	+		PGA1_c01230	0.89	+1.4
115,826	+		PGA1_c01230	0.90	-0.5
115,827	-				+0.3
115,836	+				-1.0
115,905	+				+0.6
115,905	+				+0.9
115,905	+				+0.6
115,910	+				-0.9
115,918	-				-0.1