Strain Fitness in Shewanella amazonensis SB2B around Sama_3146

Experiment: pyruvate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate
3,732,522	-		Sama_3145	0.44	-0.3
3,732,563	+		Sama_3145	0.47	-0.8
3,732,563	+		Sama_3145	0.47	+0.2
3,732,563	+		Sama_3145	0.47	-0.6
3,732,563	+		Sama_3145	0.47	+0.1
3,732,563	+		Sama_3145	0.47	-0.2
3,732,566	+		Sama_3145	0.47	+2.0
3,732,566	+		Sama_3145	0.47	-0.7
3,732,567	-		Sama_3145	0.47	-0.3
3,732,567	-		Sama_3145	0.47	-1.2
3,732,567	-		Sama_3145	0.47	-0.0
3,732,643	+		Sama_3145	0.52	-0.3
3,732,644	-		Sama_3145	0.52	+1.0
3,732,668	+		Sama_3145	0.53	-0.6
3,732,677	+		Sama_3145	0.54	+0.6
3,732,677	+		Sama_3145	0.54	+1.0
3,732,677	+		Sama_3145	0.54	-1.1
3,732,677	+		Sama_3145	0.54	+0.6
3,732,678	-		Sama_3145	0.54	+0.6
3,732,678	-		Sama_3145	0.54	+1.0
3,732,678	-		Sama_3145	0.54	+1.0
3,732,678	-		Sama_3145	0.54	-0.5
3,732,690	-		Sama_3145	0.55	+0.1
3,732,690	-		Sama_3145	0.55	-0.2
3,732,690	-		Sama_3145	0.55	+0.8
3,732,724	+		Sama_3145	0.57	+0.3
3,732,725	-		Sama_3145	0.57	+0.5
3,732,778	+		Sama_3145	0.60	-0.6
3,732,778	+		Sama_3145	0.60	-1.4
3,732,778	+		Sama_3145	0.60	+0.7
3,732,779	-		Sama_3145	0.60	+0.2
3,732,819	+		Sama_3145	0.63	-0.9
3,732,820	-		Sama_3145	0.63	-0.1
3,732,820	-		Sama_3145	0.63	-0.6
3,732,820	-		Sama_3145	0.63	-0.5
3,732,832	+		Sama_3145	0.63	-1.6
3,732,832	+		Sama_3145	0.63	-1.3
3,732,833	-		Sama_3145	0.63	+1.0
3,732,890	+		Sama_3145	0.67	+0.2
3,732,891	-		Sama_3145	0.67	+0.7
3,732,966	+		Sama_3145	0.72	+0.3
3,732,966	+		Sama_3145	0.72	-0.2
3,732,975	+		Sama_3145	0.72	+0.6
3,732,975	+		Sama_3145	0.72	+0.7
3,732,975	+		Sama_3145	0.72	+0.4
3,732,975	+		Sama_3145	0.72	-0.4
3,732,976	-		Sama_3145	0.72	+0.4
3,732,976	-		Sama_3145	0.72	-1.2
3,732,976	-		Sama_3145	0.72	-0.0
3,732,991	+		Sama_3145	0.73	+0.5
3,732,991	+		Sama_3145	0.73	-0.3
3,732,991	+		Sama_3145	0.73	+1.0
3,733,028	+		Sama_3145	0.75	+1.1
3,733,028	+		Sama_3145	0.75	-0.2
3,733,028	+		Sama_3145	0.75	-0.3
3,733,076	+		Sama_3145	0.78	+0.3
3,733,091	+		Sama_3145	0.79	+0.1
3,733,107	-		Sama_3145	0.80	+0.8
3,733,107	-		Sama_3145	0.80	+0.5
3,733,149	-		Sama_3145	0.83	-0.7
3,733,149	-		Sama_3145	0.83	-0.4
3,733,160	+		Sama_3145	0.83	-1.2
3,733,160	+		Sama_3145	0.83	+1.4
3,733,167	+		Sama_3145	0.84	-0.8
3,733,167	+		Sama_3145	0.84	+0.5
3,733,167	+		Sama_3145	0.84	-0.5
3,733,167	+		Sama_3145	0.84	-2.4
3,733,168	-		Sama_3145	0.84	-0.8
3,733,209	-		Sama_3145	0.86	+0.0
3,733,209	-		Sama_3145	0.86	-1.6
3,733,210	+		Sama_3145	0.86	-1.3
3,733,210	+		Sama_3145	0.86	-0.2
3,733,210	+		Sama_3145	0.86	-0.8
3,733,211	-		Sama_3145	0.87	+0.5
3,733,211	-		Sama_3145	0.87	-1.6
3,733,211	-		Sama_3145	0.87	-0.3
3,733,211	-		Sama_3145	0.87	+1.2
3,733,211	-		Sama_3145	0.87	+1.0
3,733,211	-		Sama_3145	0.87	+1.3
3,733,211	-		Sama_3145	0.87	-0.7
3,733,323	+				+0.4
3,733,324	-				+1.5
3,733,335	+				-0.6
3,733,335	+				-0.6
3,733,335	+				+0.1
3,733,335	+				+0.3
3,733,335	+				-0.0
3,733,336	-				+0.4
3,733,336	-				+0.0
3,733,385	+				+1.0
3,733,385	+				+0.2
3,733,386	-				+0.2
3,733,419	+				+0.2
3,733,419	+				+1.4
3,733,419	+				+0.6
3,733,420	-				-0.0
3,733,512	+				-0.8
3,733,546	+				+0.3
3,733,601	+				-2.0
3,733,601	+				+0.1
3,733,601	+				-0.4
3,733,601	+				+0.6
3,733,601	+				+0.1
3,733,601	+				+0.2
3,733,601	+				+0.6
3,733,602	-				-0.2
3,733,604	+				+1.3
3,733,785	+		Sama_3146	0.17	-0.9
3,733,785	+		Sama_3146	0.17	-1.4
3,733,785	+		Sama_3146	0.17	-0.6
3,733,785	+		Sama_3146	0.17	-0.1
3,733,786	-		Sama_3146	0.17	-0.3
3,733,786	-		Sama_3146	0.17	+1.4
3,733,786	-		Sama_3146	0.17	+1.0
3,733,801	+		Sama_3146	0.18	+0.2
3,733,801	+		Sama_3146	0.18	-0.4
3,733,802	-		Sama_3146	0.18	-0.6
3,733,852	+		Sama_3146	0.21	+0.9
3,733,852	+		Sama_3146	0.21	-0.6
3,733,853	-		Sama_3146	0.21	+0.4
3,733,858	+		Sama_3146	0.21	+0.5
3,733,858	+		Sama_3146	0.21	-0.1
3,734,147	+		Sama_3146	0.39	+0.6
3,734,270	-		Sama_3146	0.46	-1.0
3,734,270	-		Sama_3146	0.46	+0.8
3,734,483	+		Sama_3146	0.59	+0.6
3,734,484	-		Sama_3146	0.59	+0.2
3,734,564	+		Sama_3146	0.63	+0.2
3,734,564	+		Sama_3146	0.63	-0.6
3,734,564	+		Sama_3146	0.63	+0.1
3,734,682	-		Sama_3146	0.70	-0.4
3,734,682	-		Sama_3146	0.70	-0.4
3,734,777	+		Sama_3146	0.76	-0.3
3,734,778	-		Sama_3146	0.76	-0.3
3,734,813	+		Sama_3146	0.78	-0.8
3,734,813	+		Sama_3146	0.78	+2.3
3,734,813	+		Sama_3146	0.78	-1.1
3,734,813	+		Sama_3146	0.78	-0.3
3,734,813	+		Sama_3146	0.78	-0.0
3,734,814	-		Sama_3146	0.78	+0.1
3,734,814	-		Sama_3146	0.78	+0.3
3,734,814	-		Sama_3146	0.78	-0.5
3,734,814	-		Sama_3146	0.78	+0.3
3,734,814	-		Sama_3146	0.78	-0.0
3,734,814	-		Sama_3146	0.78	+0.4
3,734,851	+		Sama_3146	0.80	-1.2
3,734,961	+		Sama_3146	0.87	-0.4
3,734,961	+		Sama_3146	0.87	-0.0
3,734,962	-		Sama_3146	0.87	+0.6
3,734,962	-		Sama_3146	0.87	+0.6
3,734,978	+		Sama_3146	0.88	+0.7
3,734,979	-		Sama_3146	0.88	+0.3
3,734,979	-		Sama_3146	0.88	-0.4
3,735,015	+				-0.3
3,735,016	-				-0.7
3,735,016	-				+1.6
3,735,017	+				-1.8
3,735,018	-				+0.5
3,735,132	+				+0.5
3,735,141	+				+1.0
3,735,141	+				+0.3
3,735,141	+				-0.1
3,735,142	-				-0.3
3,735,142	-				+0.4
3,735,142	-				+0.3
3,735,142	-				-0.3
3,735,142	-				-0.5
3,735,142	-				+1.3
3,735,142	-				-0.7
3,735,142	-				-0.4
3,735,168	-				-1.4
3,735,168	-				-2.8
3,735,179	+				-0.0
3,735,179	+				+0.3
3,735,180	-				+1.0
3,735,180	-				-0.3
3,735,180	-				+1.3
3,735,180	-				-1.4
3,735,180	-				-1.3
3,735,180	-				-0.3
3,735,197	-				-1.0
3,735,201	+				-1.5
3,735,201	+				-0.2
3,735,201	+				+2.4
3,735,202	-				+1.0
3,735,202	-				+1.0
3,735,202	-				+0.1
3,735,216	+				-0.8
3,735,216	+				+0.3
3,735,217	-				-1.5
3,735,217	-				+0.9
3,735,256	+				-0.2
3,735,256	+				+0.5
3,735,256	+				+0.3
3,735,257	-				-0.4
3,735,257	-				-0.6
3,735,275	-				+1.0
3,735,295	+				+0.7
3,735,296	-				-0.6
3,735,296	-				-0.8
3,735,296	-				-0.7
3,735,296	-				+1.9
3,735,382	+				+0.3
3,735,383	-				+0.6
3,735,383	-				+0.8
3,735,452	+		Sama_3147	0.11	-0.5
3,735,452	+		Sama_3147	0.11	+1.6
3,735,453	-		Sama_3147	0.12	-1.2
3,735,453	-		Sama_3147	0.12	+1.7
3,735,490	+		Sama_3147	0.16	+0.4
3,735,494	+		Sama_3147	0.16	+0.4
3,735,494	+		Sama_3147	0.16	+1.9
3,735,494	+		Sama_3147	0.16	+0.7
3,735,494	+		Sama_3147	0.16	+0.7
3,735,494	+		Sama_3147	0.16	-0.3
3,735,494	+		Sama_3147	0.16	+0.3
3,735,495	-		Sama_3147	0.16	+0.2
3,735,495	-		Sama_3147	0.16	+1.0
3,735,495	-		Sama_3147	0.16	-0.8
3,735,495	-		Sama_3147	0.16	-0.7
3,735,495	-		Sama_3147	0.16	+0.7
3,735,495	-		Sama_3147	0.16	-1.0
3,735,495	-		Sama_3147	0.16	+1.4
3,735,620	+		Sama_3147	0.30	-0.4
3,735,620	+		Sama_3147	0.30	-0.2
3,735,620	+		Sama_3147	0.30	-0.2
3,735,620	+		Sama_3147	0.30	-0.0
3,735,620	+		Sama_3147	0.30	+0.5
3,735,621	-		Sama_3147	0.30	-1.8
3,735,621	-		Sama_3147	0.30	+0.2
3,735,632	+		Sama_3147	0.32	+0.7
3,735,632	+		Sama_3147	0.32	+0.6
3,735,632	+		Sama_3147	0.32	+0.3
3,735,632	+		Sama_3147	0.32	-1.4
3,735,632	+		Sama_3147	0.32	-0.5
3,735,633	-		Sama_3147	0.32	+0.1
3,735,698	+		Sama_3147	0.39	-0.2
3,735,698	+		Sama_3147	0.39	-0.4
3,735,699	-		Sama_3147	0.39	-0.8
3,735,699	-		Sama_3147	0.39	-0.4
3,735,767	+		Sama_3147	0.47	-0.2
3,735,767	+		Sama_3147	0.47	-0.5
3,735,767	+		Sama_3147	0.47	+1.0
3,735,767	+		Sama_3147	0.47	-0.2
3,735,774	+		Sama_3147	0.48	+0.9
3,735,775	-		Sama_3147	0.48	-0.6
3,735,792	+		Sama_3147	0.50	+0.4
3,735,792	+		Sama_3147	0.50	-0.2
3,735,793	-		Sama_3147	0.50	+0.2
3,735,807	+		Sama_3147	0.51	+0.3
3,735,807	+		Sama_3147	0.51	-1.4
3,735,807	+		Sama_3147	0.51	+0.4
3,735,808	-		Sama_3147	0.51	-0.8
3,735,817	+		Sama_3147	0.52	+0.6
3,735,879	+		Sama_3147	0.59	+2.6
3,735,879	+		Sama_3147	0.59	+1.2
3,735,879	+		Sama_3147	0.59	-1.1
3,735,880	-		Sama_3147	0.59	+1.2
3,735,880	-		Sama_3147	0.59	+0.8
3,736,033	+		Sama_3147	0.77	+0.8
3,736,034	-		Sama_3147	0.77	+0.1
3,736,039	+		Sama_3147	0.77	+0.8
3,736,039	+		Sama_3147	0.77	+0.6
3,736,040	-		Sama_3147	0.77	-0.4
3,736,041	+		Sama_3147	0.78	+0.2
3,736,041	+		Sama_3147	0.78	+0.7
3,736,041	+		Sama_3147	0.78	+0.4
3,736,041	+		Sama_3147	0.78	-0.4
3,736,041	+		Sama_3147	0.78	+1.5
3,736,041	+		Sama_3147	0.78	+0.4
3,736,041	+		Sama_3147	0.78	+0.4
3,736,042	-		Sama_3147	0.78	+1.1
3,736,042	-		Sama_3147	0.78	+0.8
3,736,042	-		Sama_3147	0.78	+1.0
3,736,080	+		Sama_3147	0.82	-0.5
3,736,080	+		Sama_3147	0.82	+1.6
3,736,080	+		Sama_3147	0.82	-1.9
3,736,081	-		Sama_3147	0.82	+0.6
3,736,081	-		Sama_3147	0.82	-0.6
3,736,082	+		Sama_3147	0.82	-1.2
3,736,082	+		Sama_3147	0.82	-0.7
3,736,082	+		Sama_3147	0.82	-1.6
3,736,083	-		Sama_3147	0.82	+0.9
3,736,083	-		Sama_3147	0.82	+0.6
3,736,083	-		Sama_3147	0.82	-0.9
3,736,083	-		Sama_3147	0.82	+0.6
3,736,083	-		Sama_3147	0.82	-1.6
3,736,083	-		Sama_3147	0.82	-0.9
3,736,141	+		Sama_3147	0.89	+0.3
3,736,141	+		Sama_3147	0.89	-0.8
3,736,147	+		Sama_3147	0.89	-0.2
3,736,148	-		Sama_3147	0.90	-3.1
3,736,150	+		Sama_3147	0.90	+0.4
3,736,151	-		Sama_3147	0.90	-1.0
3,736,151	-		Sama_3147	0.90	-0.0
3,736,174	+				-0.1
3,736,174	+				+3.1
3,736,174	+				-0.5
3,736,174	+				-1.0
3,736,174	+				+0.2
3,736,174	+				+1.0
3,736,176	+				-1.0
3,736,176	+				+0.2
3,736,176	+				+1.1
3,736,176	+				+0.1
3,736,176	+				-0.2
3,736,176	+				+0.2
3,736,176	+				+0.3
3,736,176	+				+1.4
3,736,176	+				-0.4
3,736,176	+				-0.9
3,736,176	+				+0.8
3,736,176	+				-0.4
3,736,177	-				+0.1
3,736,177	-				-0.3
3,736,177	-				-0.3
3,736,177	-				+0.6
3,736,177	-				+1.0
3,736,177	-				-1.4
3,736,177	-				-2.1
3,736,177	-				+0.2