Strain Fitness in Shewanella amazonensis SB2B around Sama_2644

Experiment: pyruvate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate
3,166,903	-		Sama_2643	0.34	-0.1
3,166,903	-		Sama_2643	0.34	-0.5
3,166,903	-		Sama_2643	0.34	-4.3
3,166,903	-		Sama_2643	0.34	-1.6
3,166,903	-		Sama_2643	0.34	-0.5
3,166,903	-		Sama_2643	0.34	-1.4
3,166,903	-		Sama_2643	0.34	+0.1
3,166,903	-		Sama_2643	0.34	-0.6
3,166,903	-		Sama_2643	0.34	-0.9
3,166,924	+		Sama_2643	0.36	-1.1
3,166,925	-		Sama_2643	0.36	-0.3
3,166,925	-		Sama_2643	0.36	+0.1
3,166,925	-		Sama_2643	0.36	-2.3
3,166,956	+		Sama_2643	0.38	+0.1
3,166,956	+		Sama_2643	0.38	+0.1
3,166,956	+		Sama_2643	0.38	-2.1
3,166,957	-		Sama_2643	0.38	-0.6
3,166,957	-		Sama_2643	0.38	-2.3
3,167,003	+		Sama_2643	0.42	+0.1
3,167,037	-		Sama_2643	0.44	-2.1
3,167,046	-		Sama_2643	0.45	-1.3
3,167,046	-		Sama_2643	0.45	+0.1
3,167,070	-		Sama_2643	0.46	-0.3
3,167,083	+		Sama_2643	0.47	-0.4
3,167,084	-		Sama_2643	0.47	+0.7
3,167,150	+		Sama_2643	0.52	-0.4
3,167,150	+		Sama_2643	0.52	+0.2
3,167,150	+		Sama_2643	0.52	+1.3
3,167,150	+		Sama_2643	0.52	-1.2
3,167,151	-		Sama_2643	0.52	+0.4
3,167,151	-		Sama_2643	0.52	-0.9
3,167,151	-		Sama_2643	0.52	-0.4
3,167,151	-		Sama_2643	0.52	-1.1
3,167,198	+		Sama_2643	0.56	+0.7
3,167,222	+		Sama_2643	0.57	+0.1
3,167,223	-		Sama_2643	0.57	-1.7
3,167,245	+		Sama_2643	0.59	+2.3
3,167,245	+		Sama_2643	0.59	+0.8
3,167,300	+		Sama_2643	0.63	-0.6
3,167,300	+		Sama_2643	0.63	-0.1
3,167,301	-		Sama_2643	0.63	+0.4
3,167,347	+		Sama_2643	0.66	+0.2
3,167,347	+		Sama_2643	0.66	+1.9
3,167,404	+		Sama_2643	0.71	-0.1
3,167,405	-		Sama_2643	0.71	-1.4
3,167,405	-		Sama_2643	0.71	-1.1
3,167,412	+		Sama_2643	0.71	-0.1
3,167,412	+		Sama_2643	0.71	+0.5
3,167,412	+		Sama_2643	0.71	+0.6
3,167,435	+		Sama_2643	0.73	+0.2
3,167,435	+		Sama_2643	0.73	-0.2
3,167,435	+		Sama_2643	0.73	-1.9
3,167,435	+		Sama_2643	0.73	+0.6
3,167,436	-		Sama_2643	0.73	+0.1
3,167,456	+		Sama_2643	0.74	+0.4
3,167,532	-		Sama_2643	0.80	-0.3
3,167,532	-		Sama_2643	0.80	-0.1
3,167,546	+		Sama_2643	0.81	+0.3
3,167,546	+		Sama_2643	0.81	+1.9
3,167,546	+		Sama_2643	0.81	-1.0
3,167,551	+		Sama_2643	0.81	-0.2
3,167,578	+		Sama_2643	0.83	-0.9
3,167,578	+		Sama_2643	0.83	+0.1
3,167,578	+		Sama_2643	0.83	-0.7
3,167,578	+		Sama_2643	0.83	+0.5
3,167,578	+		Sama_2643	0.83	-1.3
3,167,578	+		Sama_2643	0.83	+0.1
3,167,578	+		Sama_2643	0.83	-0.3
3,167,578	+		Sama_2643	0.83	-0.6
3,167,579	-		Sama_2643	0.83	-3.5
3,167,608	+		Sama_2643	0.85	-0.3
3,167,654	+		Sama_2643	0.89	+0.2
3,167,654	+		Sama_2643	0.89	-2.9
3,167,654	+		Sama_2643	0.89	-0.1
3,167,654	+		Sama_2643	0.89	-1.6
3,167,655	-		Sama_2643	0.89	+0.2
3,167,655	-		Sama_2643	0.89	-1.2
3,167,655	-		Sama_2643	0.89	-0.5
3,167,655	-		Sama_2643	0.89	-1.6
3,167,655	-		Sama_2643	0.89	-0.4
3,167,655	-		Sama_2643	0.89	+0.4
3,167,655	-		Sama_2643	0.89	-0.0
3,167,657	+		Sama_2643	0.89	+1.9
3,167,657	+		Sama_2643	0.89	+1.3
3,167,657	+		Sama_2643	0.89	+0.7
3,167,658	-		Sama_2643	0.89	+0.5
3,167,658	-		Sama_2643	0.89	+0.5
3,167,677	+				-0.4
3,167,677	+				-0.7
3,167,677	+				-0.2
3,167,677	+				+0.7
3,167,677	+				+0.2
3,167,677	+				+0.2
3,167,677	+				-0.2
3,167,677	+				-0.7
3,167,677	+				-1.0
3,167,677	+				+0.7
3,167,677	+				+0.0
3,167,677	+				-0.5
3,167,677	+				+0.7
3,167,677	+				-0.5
3,167,677	+				+0.2
3,167,677	+				-0.5
3,167,677	+				-1.1
3,167,677	+				+0.9
3,167,677	+				-0.4
3,167,677	+				+0.2
3,167,677	+				+1.4
3,167,677	+				+0.1
3,167,677	+				-0.0
3,167,677	+				-2.5
3,167,678	-				+0.3
3,167,678	-				-1.1
3,167,678	-				+0.1
3,167,678	-				+1.2
3,167,678	-				-0.1
3,167,678	-				+0.5
3,167,678	-				-0.7
3,167,678	-				+0.9
3,167,678	-				+0.1
3,167,678	-				+0.3
3,167,678	-				-1.8
3,167,678	-				+0.1
3,167,678	-				+0.6
3,167,678	-				-0.9
3,167,678	-				-0.7
3,167,678	-				-1.8
3,167,678	-				+0.3
3,167,678	-				-0.1
3,167,678	-				-1.0
3,167,678	-				-0.5
3,167,678	-				+1.5
3,167,678	-				-0.8
3,167,678	-				+0.6
3,167,678	-				+0.0
3,167,678	-				+0.6
3,167,678	-				-0.3
3,167,679	+				-0.4
3,167,679	+				-0.9
3,167,679	+				+0.3
3,167,679	+				-0.4
3,167,679	+				-2.0
3,167,679	+				-0.7
3,167,679	+				-0.0
3,167,679	+				+0.4
3,167,679	+				-1.8
3,167,679	+				+0.9
3,167,679	+				-0.9
3,167,680	-				+0.6
3,167,680	-				+0.4
3,167,680	-				+0.2
3,167,680	-				-1.7
3,167,680	-				-1.9
3,167,789	+				-0.2
3,167,789	+				-0.9
3,167,825	+				+0.7
3,167,826	-				-1.1
3,167,826	-				-0.6
3,167,826	-				-0.5
3,167,858	+				+0.4
3,167,859	-				+0.5
3,167,861	-				-0.3
3,167,970	-				-0.9
3,167,970	-				-1.4
3,167,970	-				-1.2
3,168,111	+		Sama_2644	0.19	+0.6
3,168,112	-		Sama_2644	0.19	-2.3
3,168,112	-		Sama_2644	0.19	-1.2
3,168,112	-		Sama_2644	0.19	+0.3
3,168,112	-		Sama_2644	0.19	-1.0
3,168,146	+		Sama_2644	0.21	+0.7
3,168,147	-		Sama_2644	0.21	-1.0
3,168,147	-		Sama_2644	0.21	+0.9
3,168,147	-		Sama_2644	0.21	-0.7
3,168,171	+		Sama_2644	0.23	-0.8
3,168,213	+		Sama_2644	0.26	+0.2
3,168,213	+		Sama_2644	0.26	-1.6
3,168,333	+		Sama_2644	0.35	-0.9
3,168,333	+		Sama_2644	0.35	-0.9
3,168,334	-		Sama_2644	0.35	+0.3
3,168,354	+		Sama_2644	0.37	-0.2
3,168,355	-		Sama_2644	0.37	-0.8
3,168,355	-		Sama_2644	0.37	-1.5
3,168,355	-		Sama_2644	0.37	+1.3
3,168,357	-		Sama_2644	0.37	-2.1
3,168,357	-		Sama_2644	0.37	-0.4
3,168,357	-		Sama_2644	0.37	-0.7
3,168,357	-		Sama_2644	0.37	-1.6
3,168,357	-		Sama_2644	0.37	+0.0
3,168,357	-		Sama_2644	0.37	-0.7
3,168,369	+		Sama_2644	0.38	+1.8
3,168,369	+		Sama_2644	0.38	-0.4
3,168,370	-		Sama_2644	0.38	-0.1
3,168,370	-		Sama_2644	0.38	-1.2
3,168,389	-		Sama_2644	0.39	-0.5
3,168,421	-		Sama_2644	0.42	-1.5
3,168,528	+		Sama_2644	0.49	-0.7
3,168,529	-		Sama_2644	0.50	-0.4
3,168,591	-		Sama_2644	0.54	-0.4
3,168,659	+		Sama_2644	0.59	+0.7
3,168,659	+		Sama_2644	0.59	-0.2
3,168,659	+		Sama_2644	0.59	-0.7
3,168,659	+		Sama_2644	0.59	-0.8
3,168,659	+		Sama_2644	0.59	+0.2
3,168,659	+		Sama_2644	0.59	-0.1
3,168,659	+		Sama_2644	0.59	-0.1
3,168,659	+		Sama_2644	0.59	-0.4
3,168,659	+		Sama_2644	0.59	-0.5
3,168,659	+		Sama_2644	0.59	+0.4
3,168,659	+		Sama_2644	0.59	-0.4
3,168,659	+		Sama_2644	0.59	-0.3
3,168,659	+		Sama_2644	0.59	+0.9
3,168,660	-		Sama_2644	0.59	+0.1
3,168,660	-		Sama_2644	0.59	+0.2
3,168,660	-		Sama_2644	0.59	-0.9
3,168,660	-		Sama_2644	0.59	-1.0
3,168,660	-		Sama_2644	0.59	-0.5
3,168,660	-		Sama_2644	0.59	+0.4
3,168,660	-		Sama_2644	0.59	-1.2
3,168,660	-		Sama_2644	0.59	-0.4
3,168,660	-		Sama_2644	0.59	+0.2
3,168,660	-		Sama_2644	0.59	-0.6
3,168,660	-		Sama_2644	0.59	+0.8
3,168,660	-		Sama_2644	0.59	-0.9
3,168,660	-		Sama_2644	0.59	-2.1
3,168,660	-		Sama_2644	0.59	+1.0
3,168,660	-		Sama_2644	0.59	-0.9
3,168,660	-		Sama_2644	0.59	-2.1
3,168,660	-		Sama_2644	0.59	-0.5
3,168,660	-		Sama_2644	0.59	-0.3
3,168,660	-		Sama_2644	0.59	-0.2
3,168,660	-		Sama_2644	0.59	+0.8
3,168,660	-		Sama_2644	0.59	+0.9
3,168,660	-		Sama_2644	0.59	-0.8
3,168,660	-		Sama_2644	0.59	+0.7
3,168,660	-		Sama_2644	0.59	-0.8
3,168,660	-		Sama_2644	0.59	-0.3
3,168,660	-		Sama_2644	0.59	-0.9
3,168,683	+		Sama_2644	0.61	-0.6
3,168,683	+		Sama_2644	0.61	+0.1
3,168,684	-		Sama_2644	0.61	-0.6
3,168,819	-		Sama_2644	0.71	-2.1
3,168,866	-		Sama_2644	0.74	-1.7
3,168,908	+		Sama_2644	0.78	+1.3
3,168,979	+		Sama_2644	0.83	-0.3
3,168,980	-		Sama_2644	0.83	+0.4
3,169,019	+		Sama_2644	0.86	+0.2
3,169,020	-		Sama_2644	0.86	-0.2
3,169,020	-		Sama_2644	0.86	-0.3
3,169,022	+		Sama_2644	0.86	-0.9
3,169,022	+		Sama_2644	0.86	-0.2
3,169,022	+		Sama_2644	0.86	+0.9
3,169,022	+		Sama_2644	0.86	-0.5
3,169,022	+		Sama_2644	0.86	-0.1
3,169,023	-		Sama_2644	0.86	+0.2
3,169,023	-		Sama_2644	0.86	-0.3
3,169,023	-		Sama_2644	0.86	-0.3
3,169,023	-		Sama_2644	0.86	-1.1
3,169,023	-		Sama_2644	0.86	-0.1
3,169,023	-		Sama_2644	0.86	+0.3
3,169,023	-		Sama_2644	0.86	+2.0
3,169,023	-		Sama_2644	0.86	-0.3
3,169,023	-		Sama_2644	0.86	+1.1
3,169,023	-		Sama_2644	0.86	+0.5
3,169,023	-		Sama_2644	0.86	-0.3
3,169,023	-		Sama_2644	0.86	-1.5
3,169,023	-		Sama_2644	0.86	-0.5
3,169,026	+		Sama_2644	0.86	-1.1
3,169,026	+		Sama_2644	0.86	-0.6
3,169,026	+		Sama_2644	0.86	-0.0
3,169,027	-		Sama_2644	0.86	-0.8
3,169,027	-		Sama_2644	0.86	+0.2
3,169,027	-		Sama_2644	0.86	-0.2
3,169,040	+		Sama_2644	0.87	-0.6
3,169,040	+		Sama_2644	0.87	-0.7
3,169,040	+		Sama_2644	0.87	-0.4
3,169,040	+		Sama_2644	0.87	-0.5
3,169,041	-		Sama_2644	0.87	-1.3
3,169,066	+		Sama_2644	0.89	-0.2
3,169,067	-		Sama_2644	0.89	+0.7
3,169,067	-		Sama_2644	0.89	-0.9
3,169,102	-				-2.5
3,169,111	+				+0.3
3,169,126	-				-0.7
3,169,147	-				-1.6
3,169,166	-				+0.5
3,169,166	-				+0.5
3,169,174	+				-0.1
3,169,191	-				+0.7
3,169,281	-				-1.4
3,169,281	-				-0.3
3,169,281	-				-0.3
3,169,366	+		Sama_2645	0.20	+1.0
3,169,366	+		Sama_2645	0.20	-0.3
3,169,366	+		Sama_2645	0.20	+0.7
3,169,367	-		Sama_2645	0.20	-0.9
3,169,367	-		Sama_2645	0.20	-2.3
3,169,367	-		Sama_2645	0.20	-1.9
3,169,385	+		Sama_2645	0.22	-1.1
3,169,385	+		Sama_2645	0.22	-0.3
3,169,386	-		Sama_2645	0.22	-0.3
3,169,386	-		Sama_2645	0.22	-1.6
3,169,386	-		Sama_2645	0.22	-0.4
3,169,386	-		Sama_2645	0.22	-0.4
3,169,432	-		Sama_2645	0.28	-1.7
3,169,432	-		Sama_2645	0.28	-1.6
3,169,480	+		Sama_2645	0.35	-0.5
3,169,481	-		Sama_2645	0.35	-0.5
3,169,520	+		Sama_2645	0.40	-1.0
3,169,520	+		Sama_2645	0.40	+1.3
3,169,521	-		Sama_2645	0.40	-1.2
3,169,521	-		Sama_2645	0.40	-1.9
3,169,582	+		Sama_2645	0.48	-2.3
3,169,582	+		Sama_2645	0.48	+0.9
3,169,641	+		Sama_2645	0.56	-0.9
3,169,641	+		Sama_2645	0.56	-2.2
3,169,649	-		Sama_2645	0.57	-0.9
3,169,748	+		Sama_2645	0.70	-0.9
3,169,749	-		Sama_2645	0.70	-1.0
3,169,749	-		Sama_2645	0.70	-0.0
3,169,789	+		Sama_2645	0.75	-0.3
3,169,790	-		Sama_2645	0.75	-0.5
3,169,790	-		Sama_2645	0.75	-3.0
3,169,790	-		Sama_2645	0.75	+0.1
3,169,790	-		Sama_2645	0.75	-1.3
3,169,790	-		Sama_2645	0.75	+0.3
3,169,840	-		Sama_2645	0.82	+0.1
3,169,875	+		Sama_2645	0.86	+0.7
3,169,876	-		Sama_2645	0.86	-1.4
3,169,876	-		Sama_2645	0.86	+0.3
3,169,886	-		Sama_2645	0.88	-0.7
3,169,908	+				-0.3
3,169,909	-				+0.4
3,169,911	+				+0.7
3,169,936	-				-1.6
3,169,938	+				-1.0
3,169,939	-				-0.7
3,169,939	-				-2.0
3,169,939	-				-2.1
3,169,939	-				+0.7
3,169,939	-				-0.8
3,169,939	-				-0.1
3,169,956	+				+1.0
3,169,956	+				+0.1
3,169,957	-				+0.7
3,169,980	+				+1.2
3,169,980	+				-0.0
3,169,980	+				-0.7
3,169,980	+				-0.3
3,169,980	+				-0.9
3,169,980	+				-0.5
3,169,980	+				-2.1
3,169,981	-				-0.6
3,169,981	-				-0.6
3,169,981	-				-0.6
3,169,981	-				+0.7
3,169,981	-				-1.2
3,169,981	-				-0.3
3,169,981	-				-0.8
3,169,981	-				-1.6
3,169,981	-				-1.7
3,169,981	-				-0.1
3,169,981	-				-2.1
3,169,981	-				+1.4
3,169,981	-				-0.9
3,169,981	-				+0.4
3,169,981	-				+0.4
3,169,981	-				+0.7
3,169,981	-				-0.3
3,169,981	-				+0.3
3,170,065	+				+0.1
3,170,080	+				-1.0
3,170,089	+				-0.3
3,170,125	-				-2.2
3,170,161	+				-2.1
3,170,161	+				+2.0
3,170,161	+				-1.6
3,170,162	-				-0.4
3,170,165	+				+0.1
3,170,165	+				-0.3
3,170,165	-				-1.2
3,170,165	+				-1.9
3,170,166	-				-1.5
3,170,166	-				+0.4