Strain Fitness in Shewanella amazonensis SB2B around Sama_0907

Experiment: pyruvate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate
1,094,845	+				-4.0
1,094,845	+				-1.3
1,094,846	-				-2.1
1,094,860	-				-3.9
1,094,866	-				-2.1
1,094,866	-				-3.1
1,094,866	-				-3.4
1,094,866	-				-3.0
1,094,876	+				-3.0
1,094,877	-				-2.7
1,094,877	-				-0.9
1,094,877	-				-0.3
1,094,877	-				-3.0
1,094,973	+		Sama_0906	0.15	-1.3
1,094,974	-		Sama_0906	0.15	-2.1
1,094,974	-		Sama_0906	0.15	-1.6
1,094,976	+		Sama_0906	0.15	-1.4
1,094,977	-		Sama_0906	0.16	-3.7
1,095,062	+		Sama_0906	0.25	-3.2
1,095,063	-		Sama_0906	0.25	-1.3
1,095,160	+		Sama_0906	0.35	-4.6
1,095,175	+		Sama_0906	0.37	-2.7
1,095,176	-		Sama_0906	0.37	-1.3
1,095,256	+		Sama_0906	0.45	-2.6
1,095,257	-		Sama_0906	0.45	-2.4
1,095,277	+		Sama_0906	0.47	-0.9
1,095,288	+		Sama_0906	0.48	-3.6
1,095,352	+		Sama_0906	0.55	-3.4
1,095,353	-		Sama_0906	0.55	-1.3
1,095,421	+		Sama_0906	0.63	-3.5
1,095,421	+		Sama_0906	0.63	-2.1
1,095,421	+		Sama_0906	0.63	-2.3
1,095,421	+		Sama_0906	0.63	-3.9
1,095,421	+		Sama_0906	0.63	-4.2
1,095,421	+		Sama_0906	0.63	-1.6
1,095,421	+		Sama_0906	0.63	-2.3
1,095,421	+		Sama_0906	0.63	-1.6
1,095,421	+		Sama_0906	0.63	-3.0
1,095,421	+		Sama_0906	0.63	-1.6
1,095,422	-		Sama_0906	0.63	-2.3
1,095,422	-		Sama_0906	0.63	-4.1
1,095,422	-		Sama_0906	0.63	-0.3
1,095,422	-		Sama_0906	0.63	-3.4
1,095,422	-		Sama_0906	0.63	-1.9
1,095,422	-		Sama_0906	0.63	-2.9
1,095,422	-		Sama_0906	0.63	-3.4
1,095,426	+		Sama_0906	0.63	-1.4
1,095,426	+		Sama_0906	0.63	-2.7
1,095,426	+		Sama_0906	0.63	-3.2
1,095,426	+		Sama_0906	0.63	-2.4
1,095,426	+		Sama_0906	0.63	-0.9
1,095,426	+		Sama_0906	0.63	-3.6
1,095,426	+		Sama_0906	0.63	-4.1
1,095,427	-		Sama_0906	0.63	-3.9
1,095,427	-		Sama_0906	0.63	-1.6
1,095,427	-		Sama_0906	0.63	-3.1
1,095,481	+		Sama_0906	0.69	-1.6
1,095,481	+		Sama_0906	0.69	-3.4
1,095,517	-		Sama_0906	0.73	-1.3
1,095,517	-		Sama_0906	0.73	-1.6
1,095,552	+		Sama_0906	0.76	-2.8
1,095,597	+		Sama_0906	0.81	-2.7
1,095,597	+		Sama_0906	0.81	-3.0
1,095,597	+		Sama_0906	0.81	-4.5
1,095,597	+		Sama_0906	0.81	-3.2
1,095,597	+		Sama_0906	0.81	-0.9
1,095,598	-		Sama_0906	0.81	-4.1
1,095,598	-		Sama_0906	0.81	-0.9
1,095,645	+		Sama_0906	0.86	-2.4
1,095,697	+				-1.6
1,095,698	-				-1.3
1,095,698	-				-2.3
1,095,702	+				-1.6
1,095,702	+				-2.3
1,095,703	-				-3.0
1,095,738	+				-2.9
1,095,758	+				+0.7
1,095,759	-				-2.6
1,095,791	+				-1.3
1,095,793	+				-1.6
1,095,793	+				-3.4
1,095,794	-				-0.9
1,095,801	+				-5.0
1,095,802	-				-2.6
1,095,802	-				-2.4
1,095,885	+				-1.6
1,095,885	+				-2.6
1,095,885	+				-1.3
1,095,923	+		Sama_0907	0.11	-2.3
1,095,923	+		Sama_0907	0.11	-2.7
1,096,009	-		Sama_0907	0.17	-1.9
1,096,018	-		Sama_0907	0.18	-1.2
1,096,018	-		Sama_0907	0.18	-1.3
1,096,018	-		Sama_0907	0.18	-1.3
1,096,018	-		Sama_0907	0.18	-2.4
1,096,043	+		Sama_0907	0.20	-0.9
1,096,057	+		Sama_0907	0.21	-3.4
1,096,213	+		Sama_0907	0.33	-4.2
1,096,213	+		Sama_0907	0.33	-4.3
1,096,213	+		Sama_0907	0.33	-2.9
1,096,213	+		Sama_0907	0.33	-3.3
1,096,214	-		Sama_0907	0.33	-1.9
1,096,214	-		Sama_0907	0.33	-1.7
1,096,214	-		Sama_0907	0.33	-3.3
1,096,287	+		Sama_0907	0.39	-3.3
1,096,287	+		Sama_0907	0.39	-3.0
1,096,288	-		Sama_0907	0.39	-2.9
1,096,288	-		Sama_0907	0.39	-3.3
1,096,290	+		Sama_0907	0.39	-0.9
1,096,422	+		Sama_0907	0.50	-5.4
1,096,453	+		Sama_0907	0.52	-3.1
1,096,763	+		Sama_0907	0.76	-2.3
1,096,763	+		Sama_0907	0.76	-2.1
1,096,820	-		Sama_0907	0.80	-3.7
1,096,820	-		Sama_0907	0.80	-2.6
1,096,860	+		Sama_0907	0.84	-2.4
1,096,861	-		Sama_0907	0.84	-3.4
1,096,871	+		Sama_0907	0.84	-4.1
1,096,871	+		Sama_0907	0.84	-1.6
1,096,872	-		Sama_0907	0.85	-3.8
1,096,872	-		Sama_0907	0.85	-2.7
1,096,872	-		Sama_0907	0.85	-2.4
1,097,077	+				-0.9
1,097,077	+				-1.1
1,097,077	+				-0.7
1,097,078	-				-0.4
1,097,078	-				+0.1
1,097,078	-				+0.3
1,097,114	+				-1.3
1,097,140	-				-0.0
1,097,167	+				+1.3
1,097,168	-				-0.2
1,097,168	-				-0.5
1,097,168	-				-0.8
1,097,174	+				+0.5
1,097,174	+				-0.3
1,097,174	+				+0.3
1,097,175	-				-0.6
1,097,175	-				+0.3
1,097,175	-				+0.7
1,097,178	+				+0.4
1,097,179	-				+0.1
1,097,182	+				-0.3
1,097,182	+				+0.7
1,097,182	+				+0.7
1,097,255	-				-1.4
1,097,255	-				-0.9
1,097,255	-				+1.1
1,097,285	+				+1.3
1,097,323	+				-1.7
1,097,323	+				-0.1
1,097,324	-				-0.5
1,097,324	-				-0.2
1,097,324	-				-0.3
1,097,342	-				+0.0
1,097,380	+				+0.1
1,097,381	-				-1.9
1,097,381	-				-0.9
1,097,381	-				-0.0
1,097,381	-				-1.1
1,097,381	-				+0.3
1,097,408	+				-0.3
1,097,408	+				-1.3
1,097,409	-				+0.9
1,097,409	-				-1.3
1,097,409	-				+2.5
1,097,522	+		Sama_0908	0.15	-0.3
1,097,522	+		Sama_0908	0.15	+0.6
1,097,522	+		Sama_0908	0.15	-0.5
1,097,522	+		Sama_0908	0.15	+0.2
1,097,522	+		Sama_0908	0.15	+0.4
1,097,522	+		Sama_0908	0.15	-0.7
1,097,522	+		Sama_0908	0.15	+1.4
1,097,523	-		Sama_0908	0.15	+0.5
1,097,523	-		Sama_0908	0.15	+1.6
1,097,523	-		Sama_0908	0.15	-1.9
1,097,523	-		Sama_0908	0.15	-0.3
1,097,523	-		Sama_0908	0.15	+0.1
1,097,573	+		Sama_0908	0.18	+0.6
1,097,574	-		Sama_0908	0.18	-0.6
1,097,574	-		Sama_0908	0.18	-2.9
1,097,579	+		Sama_0908	0.18	-0.4
1,097,579	+		Sama_0908	0.18	-1.1
1,097,579	+		Sama_0908	0.18	-0.7
1,097,579	+		Sama_0908	0.18	+0.7
1,097,579	+		Sama_0908	0.18	-1.1
1,097,580	-		Sama_0908	0.18	-0.3
1,097,580	-		Sama_0908	0.18	-0.2
1,097,580	-		Sama_0908	0.18	-2.6
1,097,580	-		Sama_0908	0.18	+1.4
1,097,580	-		Sama_0908	0.18	-0.5
1,097,631	-		Sama_0908	0.21	+0.1
1,097,645	-		Sama_0908	0.21	-0.9
1,097,702	+		Sama_0908	0.24	+0.1
1,097,704	+		Sama_0908	0.24	+0.2
1,097,704	+		Sama_0908	0.24	-0.5
1,097,704	+		Sama_0908	0.24	-0.4
1,097,704	+		Sama_0908	0.24	+0.5
1,097,704	+		Sama_0908	0.24	+0.1
1,097,704	+		Sama_0908	0.24	-0.3
1,097,704	+		Sama_0908	0.24	-2.1
1,097,704	+		Sama_0908	0.24	-0.2
1,097,704	+		Sama_0908	0.24	+0.2
1,097,704	+		Sama_0908	0.24	-1.6
1,097,704	+		Sama_0908	0.24	-0.5
1,097,704	+		Sama_0908	0.24	-0.6
1,097,705	-		Sama_0908	0.24	-0.0
1,097,705	-		Sama_0908	0.24	+0.1
1,097,705	-		Sama_0908	0.24	+0.2
1,097,705	-		Sama_0908	0.24	-0.5
1,097,705	-		Sama_0908	0.24	+0.0
1,097,705	-		Sama_0908	0.24	+0.7
1,097,705	-		Sama_0908	0.24	-0.7
1,097,705	-		Sama_0908	0.24	-0.5
1,097,705	-		Sama_0908	0.24	+0.7
1,097,705	-		Sama_0908	0.24	-0.2
1,097,705	-		Sama_0908	0.24	+1.0
1,097,754	-		Sama_0908	0.27	-0.9
1,097,754	-		Sama_0908	0.27	+0.4
1,097,754	-		Sama_0908	0.27	-0.4
1,097,796	+		Sama_0908	0.29	+1.6
1,097,796	+		Sama_0908	0.29	-1.0
1,097,796	+		Sama_0908	0.29	-1.2
1,097,797	-		Sama_0908	0.29	+0.2
1,097,797	-		Sama_0908	0.29	+0.0
1,097,854	+		Sama_0908	0.32	-2.2
1,097,854	+		Sama_0908	0.32	+0.3
1,097,854	+		Sama_0908	0.32	+0.1
1,097,854	+		Sama_0908	0.32	+1.1
1,097,854	+		Sama_0908	0.32	+3.0
1,097,864	+		Sama_0908	0.32	+0.1
1,097,876	+		Sama_0908	0.33	-0.3
1,097,877	-		Sama_0908	0.33	-1.6
1,097,913	+		Sama_0908	0.35	+0.4
1,097,914	-		Sama_0908	0.35	+0.4
1,097,955	+		Sama_0908	0.37	+1.0
1,097,955	+		Sama_0908	0.37	+0.1
1,097,955	+		Sama_0908	0.37	+1.5
1,097,955	+		Sama_0908	0.37	+0.1
1,097,956	-		Sama_0908	0.37	-1.1
1,097,956	-		Sama_0908	0.37	+0.6
1,097,960	+		Sama_0908	0.37	-0.9
1,097,961	-		Sama_0908	0.37	-0.3
1,097,961	-		Sama_0908	0.37	+1.6
1,097,989	+		Sama_0908	0.38	-0.4
1,097,990	-		Sama_0908	0.38	-0.6
1,097,995	+		Sama_0908	0.39	+1.1
1,097,995	+		Sama_0908	0.39	-0.7
1,097,995	+		Sama_0908	0.39	-0.0
1,097,995	+		Sama_0908	0.39	+0.7
1,097,995	+		Sama_0908	0.39	+1.7
1,097,995	+		Sama_0908	0.39	-2.9
1,097,995	+		Sama_0908	0.39	+0.8
1,097,995	+		Sama_0908	0.39	-2.1
1,097,995	+		Sama_0908	0.39	+1.0
1,097,995	+		Sama_0908	0.39	-0.4
1,097,996	-		Sama_0908	0.39	+0.3
1,097,996	-		Sama_0908	0.39	+0.2
1,097,996	-		Sama_0908	0.39	+0.5
1,097,996	-		Sama_0908	0.39	+0.1
1,097,996	-		Sama_0908	0.39	+0.7
1,097,996	-		Sama_0908	0.39	-0.4
1,098,020	+		Sama_0908	0.40	+0.2
1,098,023	+		Sama_0908	0.40	+0.3
1,098,023	+		Sama_0908	0.40	+0.7
1,098,024	-		Sama_0908	0.40	+0.4
1,098,036	+		Sama_0908	0.41	-0.0
1,098,036	+		Sama_0908	0.41	+0.1
1,098,036	+		Sama_0908	0.41	-0.1
1,098,037	-		Sama_0908	0.41	-0.3
1,098,044	+		Sama_0908	0.41	-0.1
1,098,044	+		Sama_0908	0.41	+0.4
1,098,044	+		Sama_0908	0.41	-0.2
1,098,057	+		Sama_0908	0.42	+0.4
1,098,057	+		Sama_0908	0.42	-0.3
1,098,057	+		Sama_0908	0.42	-0.3
1,098,057	+		Sama_0908	0.42	+1.0
1,098,057	+		Sama_0908	0.42	+0.1
1,098,059	+		Sama_0908	0.42	+0.5