Strain Fitness in Shewanella amazonensis SB2B around Sama_3538

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
4,168,671	+		Sama_3537	0.31	+0.5
4,168,671	+		Sama_3537	0.31	+0.0
4,168,760	-		Sama_3537	0.38	-0.1
4,168,760	-		Sama_3537	0.38	+0.6
4,168,760	-		Sama_3537	0.38	-1.3
4,168,760	-		Sama_3537	0.38	-0.6
4,168,875	+		Sama_3537	0.48	-0.3
4,168,875	+		Sama_3537	0.48	-0.6
4,168,876	-		Sama_3537	0.48	-0.1
4,168,876	-		Sama_3537	0.48	-1.3
4,168,876	-		Sama_3537	0.48	+0.3
4,168,876	-		Sama_3537	0.48	+0.8
4,168,896	-		Sama_3537	0.50	-0.1
4,168,896	-		Sama_3537	0.50	-0.0
4,168,926	+		Sama_3537	0.52	+0.5
4,168,927	-		Sama_3537	0.52	-0.5
4,168,938	+		Sama_3537	0.53	+0.5
4,168,971	+		Sama_3537	0.56	+0.5
4,168,971	+		Sama_3537	0.56	+1.1
4,168,971	+		Sama_3537	0.56	-0.6
4,168,971	+		Sama_3537	0.56	+0.1
4,168,971	+		Sama_3537	0.56	+0.2
4,168,971	+		Sama_3537	0.56	-0.1
4,168,972	-		Sama_3537	0.56	-0.2
4,168,972	-		Sama_3537	0.56	-1.3
4,168,972	-		Sama_3537	0.56	+0.4
4,168,972	-		Sama_3537	0.56	+0.3
4,168,972	-		Sama_3537	0.56	+0.2
4,169,009	-		Sama_3537	0.59	+0.2
4,169,040	+		Sama_3537	0.62	+1.3
4,169,040	+		Sama_3537	0.62	-0.3
4,169,040	+		Sama_3537	0.62	-0.6
4,169,041	-		Sama_3537	0.62	-0.8
4,169,041	-		Sama_3537	0.62	-0.1
4,169,041	-		Sama_3537	0.62	-1.0
4,169,041	-		Sama_3537	0.62	+1.1
4,169,069	+		Sama_3537	0.64	+0.5
4,169,069	+		Sama_3537	0.64	-0.5
4,169,070	-		Sama_3537	0.64	+1.1
4,169,070	-		Sama_3537	0.64	-0.2
4,169,070	-		Sama_3537	0.64	-1.0
4,169,070	-		Sama_3537	0.64	-0.2
4,169,070	-		Sama_3537	0.64	-1.3
4,169,070	-		Sama_3537	0.64	-0.1
4,169,070	-		Sama_3537	0.64	+0.3
4,169,089	+		Sama_3537	0.66	+1.6
4,169,089	+		Sama_3537	0.66	+0.0
4,169,090	-		Sama_3537	0.66	+0.1
4,169,090	-		Sama_3537	0.66	+0.2
4,169,090	-		Sama_3537	0.66	-0.2
4,169,090	-		Sama_3537	0.66	+0.1
4,169,090	-		Sama_3537	0.66	-0.0
4,169,090	-		Sama_3537	0.66	+0.5
4,169,132	+		Sama_3537	0.70	+0.6
4,169,132	+		Sama_3537	0.70	+2.1
4,169,132	+		Sama_3537	0.70	+0.9
4,169,132	+		Sama_3537	0.70	+0.2
4,169,133	-		Sama_3537	0.70	-0.2
4,169,133	-		Sama_3537	0.70	+0.2
4,169,133	-		Sama_3537	0.70	-0.0
4,169,133	-		Sama_3537	0.70	-2.5
4,169,133	-		Sama_3537	0.70	-0.4
4,169,176	+		Sama_3537	0.73	+1.2
4,169,176	+		Sama_3537	0.73	+0.4
4,169,176	+		Sama_3537	0.73	+0.2
4,169,177	-		Sama_3537	0.73	-0.3
4,169,210	+		Sama_3537	0.76	-0.1
4,169,210	+		Sama_3537	0.76	-0.6
4,169,210	+		Sama_3537	0.76	-2.4
4,169,210	+		Sama_3537	0.76	-0.6
4,169,211	-		Sama_3537	0.76	+0.9
4,169,211	-		Sama_3537	0.76	+1.1
4,169,211	-		Sama_3537	0.76	-0.1
4,169,211	-		Sama_3537	0.76	+0.0
4,169,211	-		Sama_3537	0.76	+0.3
4,169,215	+		Sama_3537	0.77	+0.4
4,169,216	-		Sama_3537	0.77	-0.6
4,169,222	-		Sama_3537	0.77	+1.1
4,169,222	-		Sama_3537	0.77	+0.0
4,169,222	-		Sama_3537	0.77	-0.0
4,169,236	+		Sama_3537	0.78	+2.0
4,169,236	+		Sama_3537	0.78	+2.0
4,169,236	+		Sama_3537	0.78	-1.7
4,169,236	+		Sama_3537	0.78	-1.5
4,169,236	+		Sama_3537	0.78	+1.1
4,169,237	-		Sama_3537	0.79	+0.6
4,169,237	-		Sama_3537	0.79	-0.2
4,169,237	-		Sama_3537	0.79	+0.8
4,169,237	-		Sama_3537	0.79	-1.0
4,169,237	-		Sama_3537	0.79	+1.5
4,169,237	-		Sama_3537	0.79	+0.0
4,169,237	-		Sama_3537	0.79	-0.3
4,169,237	-		Sama_3537	0.79	+0.1
4,169,237	-		Sama_3537	0.79	+0.7
4,169,237	-		Sama_3537	0.79	-0.6
4,169,279	-		Sama_3537	0.82	+1.5
4,169,279	-		Sama_3537	0.82	-2.2
4,169,301	+		Sama_3537	0.84	+0.1
4,169,301	+		Sama_3537	0.84	-0.6
4,169,301	+		Sama_3537	0.84	-2.0
4,169,301	+		Sama_3537	0.84	+0.4
4,169,301	+		Sama_3537	0.84	+0.1
4,169,302	-		Sama_3537	0.84	-1.2
4,169,302	-		Sama_3537	0.84	+3.2
4,169,302	-		Sama_3537	0.84	-0.5
4,169,302	-		Sama_3537	0.84	-1.5
4,169,303	+		Sama_3537	0.84	+0.1
4,169,303	+		Sama_3537	0.84	-0.1
4,169,303	+		Sama_3537	0.84	-0.4
4,169,303	+		Sama_3537	0.84	+0.1
4,169,303	+		Sama_3537	0.84	+0.7
4,169,303	+		Sama_3537	0.84	+0.4
4,169,303	+		Sama_3537	0.84	-0.1
4,169,303	+		Sama_3537	0.84	-0.1
4,169,303	+		Sama_3537	0.84	-1.2
4,169,303	+		Sama_3537	0.84	+0.1
4,169,304	-		Sama_3537	0.84	-0.3
4,169,304	-		Sama_3537	0.84	+0.4
4,169,304	-		Sama_3537	0.84	-0.2
4,169,304	-		Sama_3537	0.84	-0.3
4,169,304	-		Sama_3537	0.84	+0.2
4,169,304	-		Sama_3537	0.84	-0.8
4,169,304	-		Sama_3537	0.84	-1.0
4,169,323	+		Sama_3537	0.86	-1.3
4,169,323	+		Sama_3537	0.86	-1.4
4,169,373	-				+0.5
4,169,395	+				+0.3
4,169,401	+				-0.3
4,169,401	+				-0.1
4,169,402	-				+1.1
4,169,402	-				-0.1
4,169,402	-				+0.9
4,169,455	+				-0.2
4,169,455	+				-0.1
4,169,455	+				+0.4
4,169,455	+				+1.5
4,169,455	+				-0.1
4,169,456	-				+0.3
4,169,456	-				-0.9
4,169,456	-				-0.4
4,169,456	-				+0.0
4,169,456	-				-1.5
4,169,456	-				-0.6
4,169,456	-				-0.1
4,169,456	-				+0.7
4,169,491	+				+0.9
4,169,491	+				-0.8
4,169,492	-				-0.2
4,169,492	-				-0.1
4,169,528	+				-0.2
4,169,528	+				-1.8
4,169,529	-				-0.1
4,169,529	-				+0.2
4,169,529	-				-0.9
4,169,531	+				+0.8
4,169,531	+				-1.3
4,169,531	+				-0.5
4,169,531	+				+0.9
4,169,531	+				-1.5
4,169,531	+				-1.2
4,169,531	+				-0.5
4,169,531	+				-0.0
4,169,531	+				-0.7
4,169,531	+				-0.5
4,169,531	+				+0.3
4,169,531	+				-0.8
4,169,531	+				+0.7
4,169,531	+				-0.8
4,169,532	-				+0.2
4,169,532	-				+0.1
4,169,532	-				+0.5
4,169,532	-				+0.7
4,169,532	-				+1.2
4,169,532	-				-0.2
4,169,532	-				-1.6
4,169,532	-				+0.2
4,169,532	-				-0.1
4,169,532	-				+0.5
4,169,532	-				+1.7
4,169,532	-				+0.4
4,169,534	-				-0.5
4,169,605	+				+0.8
4,169,606	-				+2.3
4,169,606	-				-0.5
4,169,613	+				+0.4
4,169,613	+				-0.5
4,169,633	+				+0.5
4,169,639	+				+0.2
4,169,640	-				+0.7
4,169,645	+				-0.1
4,169,645	+				+0.5
4,169,650	+				+0.9
4,169,650	+				+0.2
4,169,650	+				+0.4
4,169,650	+				-0.5
4,169,650	+				-0.1
4,169,650	+				+0.2
4,169,651	-		Sama_3538	0.10	+1.0
4,169,651	-		Sama_3538	0.10	-0.1
4,169,651	-		Sama_3538	0.10	+1.7
4,169,651	-		Sama_3538	0.10	+0.5
4,169,651	-		Sama_3538	0.10	+1.0
4,169,651	-		Sama_3538	0.10	+1.9
4,169,671	+		Sama_3538	0.22	+0.0
4,169,671	+		Sama_3538	0.22	+2.1
4,169,672	-		Sama_3538	0.23	+0.3
4,169,733	-		Sama_3538	0.59	-0.7
4,169,733	-		Sama_3538	0.59	+1.5
4,169,733	-		Sama_3538	0.59	-1.6
4,169,735	+		Sama_3538	0.60	+0.3
4,169,735	+		Sama_3538	0.60	+1.0
4,169,736	-		Sama_3538	0.61	-1.8
4,169,736	-		Sama_3538	0.61	-0.8
4,169,788	+				+1.9
4,169,789	-				+1.2
4,169,789	-				+0.0
4,169,789	-				+0.2
4,169,792	+				-0.4
4,169,800	-				-0.5
4,169,800	-				+0.4
4,169,863	+				-1.3
4,169,894	+				+0.8
4,169,894	+				-0.6
4,169,895	-				+0.3
4,169,895	-				-2.6
4,169,905	+				-0.0
4,169,906	-				-0.1
4,169,935	+				-0.2
4,170,012	-				+0.5
4,170,012	-				-0.2
4,170,012	-				+0.5
4,170,052	+		Sama_3539	0.13	-0.5
4,170,052	+		Sama_3539	0.13	-0.0
4,170,052	+		Sama_3539	0.13	-0.5
4,170,053	-		Sama_3539	0.13	+0.8
4,170,053	-		Sama_3539	0.13	-0.9
4,170,102	-		Sama_3539	0.19	-0.4
4,170,102	-		Sama_3539	0.19	-0.2
4,170,148	+		Sama_3539	0.24	+0.5
4,170,148	+		Sama_3539	0.24	-0.6
4,170,148	+		Sama_3539	0.24	+1.0
4,170,149	-		Sama_3539	0.24	+1.0
4,170,156	-		Sama_3539	0.25	+0.1
4,170,181	+		Sama_3539	0.28	-0.2
4,170,181	+		Sama_3539	0.28	-3.1
4,170,182	-		Sama_3539	0.28	+0.3
4,170,278	-		Sama_3539	0.39	+1.0
4,170,283	-		Sama_3539	0.40	-0.1
4,170,283	-		Sama_3539	0.40	+0.2
4,170,283	-		Sama_3539	0.40	-2.3
4,170,283	-		Sama_3539	0.40	+0.5
4,170,283	-		Sama_3539	0.40	-0.1
4,170,283	-		Sama_3539	0.40	+0.0
4,170,283	-		Sama_3539	0.40	-0.9
4,170,392	+		Sama_3539	0.53	-0.1
4,170,392	+		Sama_3539	0.53	-0.5
4,170,392	+		Sama_3539	0.53	+0.9
4,170,393	-		Sama_3539	0.53	+1.1
4,170,405	+		Sama_3539	0.54	-0.2
4,170,406	-		Sama_3539	0.54	-0.5
4,170,406	-		Sama_3539	0.54	-0.2
4,170,417	+		Sama_3539	0.55	-0.1
4,170,417	+		Sama_3539	0.55	+2.5
4,170,417	+		Sama_3539	0.55	-0.4
4,170,418	-		Sama_3539	0.56	+0.4
4,170,418	-		Sama_3539	0.56	+0.5
4,170,432	+		Sama_3539	0.57	+0.4
4,170,432	+		Sama_3539	0.57	+0.4
4,170,432	+		Sama_3539	0.57	+0.2
4,170,433	-		Sama_3539	0.57	+0.1
4,170,482	+		Sama_3539	0.63	+0.2
4,170,482	+		Sama_3539	0.63	+0.3
4,170,482	+		Sama_3539	0.63	+0.6
4,170,482	+		Sama_3539	0.63	-0.5
4,170,482	+		Sama_3539	0.63	+0.6
4,170,483	-		Sama_3539	0.63	-1.2
4,170,483	-		Sama_3539	0.63	+0.1
4,170,483	-		Sama_3539	0.63	-0.6
4,170,509	+		Sama_3539	0.66	+0.7
4,170,509	+		Sama_3539	0.66	-0.1
4,170,509	+		Sama_3539	0.66	-1.8
4,170,510	-		Sama_3539	0.66	+0.7
4,170,510	-		Sama_3539	0.66	+0.3
4,170,510	-		Sama_3539	0.66	+0.5
4,170,510	-		Sama_3539	0.66	+1.0
4,170,510	-		Sama_3539	0.66	-0.9
4,170,510	-		Sama_3539	0.66	-0.6
4,170,525	+		Sama_3539	0.68	-1.2
4,170,552	-		Sama_3539	0.71	+0.9
4,170,580	+		Sama_3539	0.75	-0.2
4,170,581	-		Sama_3539	0.75	-0.5
4,170,581	-		Sama_3539	0.75	-0.4
4,170,625	+		Sama_3539	0.80	-0.8
4,170,626	-		Sama_3539	0.80	-1.1
4,170,699	+		Sama_3539	0.88	+0.7
4,170,700	-		Sama_3539	0.89	-0.1
4,170,700	-		Sama_3539	0.89	-0.1
4,170,753	-				+0.9