Strain Fitness in Shewanella amazonensis SB2B around Sama_3214

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
3,805,043	+		Sama_3213	0.75	-0.3
3,805,128	-		Sama_3213	0.78	-1.4
3,805,155	-		Sama_3213	0.79	+0.4
3,805,174	+		Sama_3213	0.80	+0.7
3,805,174	+		Sama_3213	0.80	+0.4
3,805,175	-		Sama_3213	0.80	-1.8
3,805,175	-		Sama_3213	0.80	+0.1
3,805,175	-		Sama_3213	0.80	-1.7
3,805,175	-		Sama_3213	0.80	-0.7
3,805,175	-		Sama_3213	0.80	-0.7
3,805,177	+		Sama_3213	0.80	+0.5
3,805,178	-		Sama_3213	0.80	-0.3
3,805,305	+		Sama_3213	0.84	-0.3
3,805,305	+		Sama_3213	0.84	+0.9
3,805,306	-		Sama_3213	0.84	+0.4
3,805,414	+		Sama_3213	0.88	-0.7
3,805,415	-		Sama_3213	0.88	+2.9
3,805,415	-		Sama_3213	0.88	-1.4
3,805,415	-		Sama_3213	0.88	-0.9
3,805,415	-		Sama_3213	0.88	-1.3
3,805,415	-		Sama_3213	0.88	-1.7
3,805,415	-		Sama_3213	0.88	+0.8
3,805,446	+		Sama_3213	0.89	+0.6
3,805,447	-		Sama_3213	0.89	-0.0
3,805,483	+				-1.5
3,805,483	+				-0.7
3,805,483	+				+0.5
3,805,484	-				-0.3
3,805,484	-				+1.0
3,805,511	-				-0.8
3,805,511	-				-0.3
3,805,511	-				+0.2
3,805,540	+				-0.4
3,805,540	+				-0.7
3,805,540	+				+0.3
3,805,541	-				-0.4
3,805,560	-				-0.3
3,805,570	+				-0.5
3,805,570	+				-0.0
3,805,570	+				+0.3
3,805,571	-				-1.4
3,805,571	-				-1.3
3,805,571	-				-1.0
3,805,571	-				-0.1
3,805,571	-				+1.0
3,805,596	+				+1.0
3,805,597	-				-2.0
3,805,597	-				+0.3
3,805,597	-				-1.3
3,805,601	+				+0.7
3,805,659	-				+0.5
3,805,659	-				+0.8
3,805,733	+				-1.3
3,805,766	+				-0.1
3,805,766	+				+0.0
3,805,766	+				+0.0
3,805,766	+				+0.2
3,805,766	+				+0.0
3,805,767	-				-1.6
3,805,767	-				-0.0
3,805,767	-				+1.6
3,805,767	-				+1.3
3,805,785	+				+0.1
3,805,909	+				+0.3
3,805,915	-				-0.3
3,805,917	+				+0.6
3,805,917	+				-0.3
3,805,930	+				+1.3
3,805,930	+				-0.5
3,805,930	+				+1.0
3,805,930	+				+1.3
3,805,931	-				-0.7
3,805,934	+				+0.9
3,805,935	-				-0.5
3,805,935	-				-0.9
3,806,030	+				+3.6
3,806,030	+				+2.0
3,806,030	+				+1.7
3,806,031	-				+1.3
3,806,031	-				+2.6
3,806,031	-				+1.7
3,806,031	-				+1.6
3,806,031	-				+2.2
3,806,031	-				+1.7
3,806,031	-				+1.9
3,806,031	-				+2.3
3,806,186	+		Sama_3214	0.21	+1.7
3,806,186	+		Sama_3214	0.21	+1.9
3,806,186	+		Sama_3214	0.21	+1.7
3,806,187	-		Sama_3214	0.21	+2.7
3,806,187	-		Sama_3214	0.21	+2.1
3,806,187	-		Sama_3214	0.21	+1.7
3,806,187	-		Sama_3214	0.21	+0.9
3,806,276	-		Sama_3214	0.30	+2.1
3,806,296	+		Sama_3214	0.33	+2.5
3,806,296	+		Sama_3214	0.33	+2.2
3,806,296	+		Sama_3214	0.33	+2.5
3,806,296	+		Sama_3214	0.33	+0.3
3,806,297	-		Sama_3214	0.33	+2.5
3,806,297	-		Sama_3214	0.33	+2.3
3,806,297	-		Sama_3214	0.33	+1.8
3,806,297	-		Sama_3214	0.33	+2.0
3,806,297	-		Sama_3214	0.33	+1.9
3,806,314	+		Sama_3214	0.35	+1.6
3,806,315	-		Sama_3214	0.35	+1.7
3,806,315	-		Sama_3214	0.35	+1.9
3,806,413	+		Sama_3214	0.45	+1.7
3,806,476	+		Sama_3214	0.52	+1.8
3,806,477	-		Sama_3214	0.52	+1.1
3,806,477	-		Sama_3214	0.52	+1.8
3,806,541	-		Sama_3214	0.59	+1.3
3,806,553	+		Sama_3214	0.61	+2.5
3,806,553	+		Sama_3214	0.61	+0.7
3,806,554	-		Sama_3214	0.61	+1.8
3,806,554	-		Sama_3214	0.61	+1.7
3,806,554	-		Sama_3214	0.61	+1.4
3,806,557	+		Sama_3214	0.61	+1.8
3,806,557	+		Sama_3214	0.61	+1.9
3,806,557	+		Sama_3214	0.61	+1.3
3,806,557	+		Sama_3214	0.61	+1.3
3,806,557	+		Sama_3214	0.61	+2.8
3,806,557	+		Sama_3214	0.61	+1.5
3,806,557	+		Sama_3214	0.61	+2.8
3,806,558	-		Sama_3214	0.61	+2.3
3,806,558	-		Sama_3214	0.61	+2.2
3,806,558	-		Sama_3214	0.61	+1.9
3,806,558	-		Sama_3214	0.61	+2.3
3,806,584	+		Sama_3214	0.64	+0.7
3,806,584	+		Sama_3214	0.64	+0.9
3,806,585	-		Sama_3214	0.64	+2.1
3,806,598	-		Sama_3214	0.65	+0.1
3,806,598	-		Sama_3214	0.65	+3.2
3,806,695	+		Sama_3214	0.76	+1.8
3,806,695	+		Sama_3214	0.76	+2.3
3,806,696	-		Sama_3214	0.76	+1.6
3,806,814	+		Sama_3214	0.89	+2.7
3,806,815	-		Sama_3214	0.89	+1.9
3,806,815	-		Sama_3214	0.89	+2.2
3,806,815	-		Sama_3214	0.89	+1.5
3,806,815	-		Sama_3214	0.89	+2.5
3,806,863	+				+1.9
3,806,863	+				+2.3
3,806,863	+				+0.9
3,806,863	+				+2.0
3,806,863	+				+2.1
3,806,864	-				+1.4
3,806,864	-				+2.1
3,806,866	+				+1.9
3,806,866	+				+2.6
3,806,866	+				+2.3
3,806,866	+				+2.5
3,806,867	-				+1.0
3,806,867	-				+1.0
3,806,899	-				+0.9
3,806,916	+				+1.7
3,806,916	+				+1.8
3,806,916	+				+1.4
3,806,916	+				+0.8
3,806,916	+				+0.9
3,806,916	+				+2.1
3,806,916	+				+1.3
3,806,916	+				+1.6
3,806,916	+				+1.1
3,806,917	-				+0.4
3,806,917	-				+1.2
3,806,917	-				+0.6
3,806,927	+				+2.0
3,806,927	+				+2.4
3,806,927	+				+0.1
3,806,927	+				+1.3
3,806,927	+				+1.7
3,806,927	+				+1.4
3,806,927	+				+1.6
3,806,928	-				-0.4
3,806,928	-				-1.0
3,806,928	-				-1.3
3,806,928	-				-1.0
3,806,928	-				-0.4
3,806,928	-				-0.2
3,806,928	-				+1.3
3,806,928	-				+0.7
3,806,928	-				-1.5
3,806,928	-				-1.2
3,806,928	-				+0.2
3,807,009	+				-0.1
3,807,009	+				+1.3
3,807,009	+				-1.0
3,807,009	+				+0.1
3,807,010	-				+0.2
3,807,045	+				+1.1
3,807,045	+				+0.7
3,807,046	-				-0.4
3,807,046	-				-1.6
3,807,046	-				+0.7
3,807,046	-				-1.4
3,807,046	-				+0.8
3,807,072	+		Sama_3215	0.11	+0.5
3,807,073	-		Sama_3215	0.11	-1.3
3,807,095	+		Sama_3215	0.13	+1.0
3,807,095	+		Sama_3215	0.13	-0.1
3,807,096	-		Sama_3215	0.13	-0.8
3,807,111	+		Sama_3215	0.14	+0.8
3,807,112	-		Sama_3215	0.14	-2.1
3,807,112	-		Sama_3215	0.14	-1.3
3,807,112	-		Sama_3215	0.14	+0.0
3,807,125	+		Sama_3215	0.15	+1.3
3,807,125	+		Sama_3215	0.15	-1.0
3,807,125	+		Sama_3215	0.15	-0.0
3,807,125	+		Sama_3215	0.15	+1.3
3,807,125	+		Sama_3215	0.15	+0.8
3,807,126	-		Sama_3215	0.15	+0.7
3,807,126	-		Sama_3215	0.15	-0.1
3,807,126	-		Sama_3215	0.15	-0.3
3,807,126	-		Sama_3215	0.15	-0.1
3,807,126	-		Sama_3215	0.15	-1.0
3,807,147	+		Sama_3215	0.17	+0.3
3,807,147	+		Sama_3215	0.17	+0.8
3,807,156	-		Sama_3215	0.17	-3.3
3,807,223	+		Sama_3215	0.23	+0.1
3,807,223	+		Sama_3215	0.23	+1.7
3,807,223	+		Sama_3215	0.23	-1.3
3,807,223	+		Sama_3215	0.23	+0.9
3,807,223	+		Sama_3215	0.23	+0.7
3,807,223	+		Sama_3215	0.23	-0.0
3,807,223	+		Sama_3215	0.23	-1.3
3,807,224	-		Sama_3215	0.23	-2.1
3,807,224	-		Sama_3215	0.23	-1.1
3,807,224	-		Sama_3215	0.23	+3.4
3,807,224	-		Sama_3215	0.23	-0.3
3,807,224	-		Sama_3215	0.23	-0.3
3,807,224	-		Sama_3215	0.23	-2.7
3,807,227	+		Sama_3215	0.23	+1.1
3,807,227	+		Sama_3215	0.23	-1.0
3,807,227	+		Sama_3215	0.23	+1.7
3,807,227	+		Sama_3215	0.23	-1.0
3,807,228	-		Sama_3215	0.23	-2.1
3,807,228	-		Sama_3215	0.23	+0.6
3,807,228	-		Sama_3215	0.23	+0.2
3,807,254	+		Sama_3215	0.25	+1.3
3,807,254	+		Sama_3215	0.25	-0.0
3,807,255	-		Sama_3215	0.25	+0.1
3,807,255	-		Sama_3215	0.25	-0.4
3,807,255	-		Sama_3215	0.25	-0.3
3,807,255	-		Sama_3215	0.25	-0.3
3,807,255	-		Sama_3215	0.25	-0.7
3,807,255	-		Sama_3215	0.25	-2.2
3,807,260	+		Sama_3215	0.25	+1.1
3,807,260	+		Sama_3215	0.25	+1.7
3,807,260	+		Sama_3215	0.25	+1.9
3,807,260	+		Sama_3215	0.25	+2.3
3,807,261	-		Sama_3215	0.25	+0.1
3,807,282	+		Sama_3215	0.27	+0.9
3,807,282	+		Sama_3215	0.27	+1.2
3,807,282	+		Sama_3215	0.27	-0.7
3,807,282	+		Sama_3215	0.27	+0.7
3,807,283	-		Sama_3215	0.27	-0.8
3,807,283	-		Sama_3215	0.27	+0.3
3,807,283	-		Sama_3215	0.27	-1.7
3,807,283	-		Sama_3215	0.27	-0.5
3,807,446	+		Sama_3215	0.39	+2.6
3,807,446	+		Sama_3215	0.39	+0.0
3,807,447	-		Sama_3215	0.39	-0.5
3,807,447	-		Sama_3215	0.39	+0.0
3,807,447	-		Sama_3215	0.39	-1.7
3,807,537	-		Sama_3215	0.46	-0.5
3,807,589	+		Sama_3215	0.50	-0.7
3,807,589	+		Sama_3215	0.50	-0.4
3,807,590	-		Sama_3215	0.50	-0.5
3,807,590	-		Sama_3215	0.50	-0.3
3,807,617	+		Sama_3215	0.52	-0.7
3,807,617	+		Sama_3215	0.52	-0.1
3,807,618	-		Sama_3215	0.52	-1.7
3,807,618	-		Sama_3215	0.52	-2.0
3,807,691	-		Sama_3215	0.58	-0.7
3,807,712	-		Sama_3215	0.60	-1.7
3,807,720	+		Sama_3215	0.60	-1.0
3,807,720	+		Sama_3215	0.60	+0.2
3,807,757	+		Sama_3215	0.63	-0.3
3,807,757	+		Sama_3215	0.63	+0.3
3,807,761	-		Sama_3215	0.63	+0.0
3,807,761	-		Sama_3215	0.63	+3.3
3,807,761	-		Sama_3215	0.63	+1.3
3,807,783	+		Sama_3215	0.65	+1.6
3,807,783	+		Sama_3215	0.65	+1.1
3,807,784	-		Sama_3215	0.65	-0.3
3,807,803	+		Sama_3215	0.66	-0.6
3,807,803	+		Sama_3215	0.66	+0.3
3,807,804	-		Sama_3215	0.67	+0.4
3,807,804	-		Sama_3215	0.67	-0.1
3,807,825	+		Sama_3215	0.68	+1.5
3,807,831	+		Sama_3215	0.69	+1.3
3,807,831	+		Sama_3215	0.69	+1.0
3,807,831	+		Sama_3215	0.69	+2.3
3,807,831	+		Sama_3215	0.69	+0.4
3,807,832	-		Sama_3215	0.69	-1.0
3,807,832	-		Sama_3215	0.69	-0.7
3,807,832	-		Sama_3215	0.69	-1.8
3,807,832	-		Sama_3215	0.69	-0.3
3,807,835	+		Sama_3215	0.69	+0.2
3,807,835	+		Sama_3215	0.69	-1.0
3,807,835	+		Sama_3215	0.69	-0.3
3,807,835	+		Sama_3215	0.69	-0.1
3,807,835	+		Sama_3215	0.69	-0.1
3,807,836	-		Sama_3215	0.69	+1.3
3,807,836	-		Sama_3215	0.69	-0.8
3,807,836	-		Sama_3215	0.69	-0.5
3,807,836	-		Sama_3215	0.69	+0.3
3,807,836	-		Sama_3215	0.69	+0.5
3,807,875	+		Sama_3215	0.72	-0.3
3,807,876	-		Sama_3215	0.72	-1.6
3,807,898	-		Sama_3215	0.74	-0.7
3,807,907	+		Sama_3215	0.74	+1.2
3,807,907	+		Sama_3215	0.74	+0.4