Strain Fitness in Shewanella amazonensis SB2B around Sama_3196

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
3,786,688	+				+0.0
3,786,688	+				+0.9
3,786,689	-				+0.1
3,786,714	+				+0.9
3,786,833	-				-1.7
3,786,833	-				-2.0
3,786,862	+		Sama_3194	0.13	-1.3
3,786,888	+		Sama_3194	0.18	-2.4
3,786,888	+		Sama_3194	0.18	-1.5
3,786,889	-		Sama_3194	0.19	-0.3
3,786,965	+		Sama_3194	0.35	-2.5
3,786,965	+		Sama_3194	0.35	-0.3
3,786,965	+		Sama_3194	0.35	-1.5
3,786,965	+		Sama_3194	0.35	-1.9
3,786,965	+		Sama_3194	0.35	-2.8
3,786,966	-		Sama_3194	0.36	-2.1
3,786,966	-		Sama_3194	0.36	-2.0
3,787,007	+		Sama_3194	0.45	-1.7
3,787,008	-		Sama_3194	0.45	-1.9
3,787,031	+		Sama_3194	0.50	+0.3
3,787,032	-		Sama_3194	0.50	-1.3
3,787,032	-		Sama_3194	0.50	-1.0
3,787,032	-		Sama_3194	0.50	-0.3
3,787,032	-		Sama_3194	0.50	+0.4
3,787,032	-		Sama_3194	0.50	-2.0
3,787,032	-		Sama_3194	0.50	-1.3
3,787,034	+		Sama_3194	0.50	-0.7
3,787,035	-		Sama_3194	0.51	+0.3
3,787,159	-		Sama_3194	0.78	-1.3
3,787,209	+		Sama_3194	0.89	+0.3
3,787,303	-		Sama_3195	0.10	+0.3
3,787,392	+		Sama_3195	0.31	-0.9
3,787,481	+		Sama_3195	0.52	-0.3
3,787,627	-		Sama_3195	0.86	-1.0
3,787,697	+				-0.5
3,787,705	+				-1.0
3,787,743	-				-1.0
3,787,785	+				-1.6
3,787,785	+				-1.5
3,787,785	+				-0.9
3,787,786	-				-0.5
3,787,786	-				-0.2
3,787,786	-				-1.4
3,787,786	-				-0.7
3,787,843	+		Sama_3196	0.12	-0.5
3,787,843	+		Sama_3196	0.12	-0.7
3,787,843	+		Sama_3196	0.12	-0.3
3,787,844	-		Sama_3196	0.12	-0.5
3,787,844	-		Sama_3196	0.12	-0.0
3,787,844	-		Sama_3196	0.12	-2.7
3,787,869	+		Sama_3196	0.14	-1.0
3,787,869	+		Sama_3196	0.14	-0.5
3,787,869	+		Sama_3196	0.14	-0.7
3,787,869	+		Sama_3196	0.14	-1.4
3,787,869	+		Sama_3196	0.14	+0.8
3,787,869	+		Sama_3196	0.14	-0.3
3,787,869	+		Sama_3196	0.14	-2.2
3,787,870	-		Sama_3196	0.14	-0.3
3,787,870	-		Sama_3196	0.14	-1.7
3,787,870	-		Sama_3196	0.14	+0.5
3,787,888	+		Sama_3196	0.15	-3.0
3,787,889	-		Sama_3196	0.16	-0.5
3,787,890	+		Sama_3196	0.16	-0.5
3,787,924	+		Sama_3196	0.18	-1.5
3,787,924	+		Sama_3196	0.18	-2.0
3,787,924	+		Sama_3196	0.18	-0.6
3,787,924	+		Sama_3196	0.18	-0.8
3,787,924	+		Sama_3196	0.18	-2.1
3,787,924	+		Sama_3196	0.18	-0.9
3,787,925	-		Sama_3196	0.18	-1.9
3,787,925	-		Sama_3196	0.18	-0.9
3,787,925	-		Sama_3196	0.18	-1.9
3,787,925	-		Sama_3196	0.18	-0.7
3,787,935	+		Sama_3196	0.19	-0.5
3,788,015	+		Sama_3196	0.25	-0.9
3,788,020	+		Sama_3196	0.25	-1.3
3,788,020	+		Sama_3196	0.25	-2.9
3,788,020	+		Sama_3196	0.25	-1.9
3,788,021	-		Sama_3196	0.25	-1.0
3,788,021	-		Sama_3196	0.25	-1.3
3,788,036	+		Sama_3196	0.26	-2.3
3,788,037	-		Sama_3196	0.26	-0.8
3,788,078	+		Sama_3196	0.29	-1.3
3,788,078	+		Sama_3196	0.29	-1.2
3,788,078	+		Sama_3196	0.29	-2.7
3,788,078	+		Sama_3196	0.29	+0.4
3,788,079	-		Sama_3196	0.29	-0.5
3,788,079	-		Sama_3196	0.29	-1.3
3,788,079	-		Sama_3196	0.29	+0.3
3,788,146	+		Sama_3196	0.34	-0.4
3,788,146	+		Sama_3196	0.34	-1.3
3,788,146	+		Sama_3196	0.34	-1.0
3,788,146	+		Sama_3196	0.34	+0.2
3,788,146	+		Sama_3196	0.34	-1.3
3,788,146	+		Sama_3196	0.34	-0.1
3,788,146	+		Sama_3196	0.34	-1.4
3,788,146	+		Sama_3196	0.34	-1.6
3,788,146	+		Sama_3196	0.34	-0.4
3,788,146	+		Sama_3196	0.34	-1.6
3,788,146	+		Sama_3196	0.34	-1.0
3,788,146	+		Sama_3196	0.34	-0.5
3,788,146	+		Sama_3196	0.34	-1.2
3,788,146	+		Sama_3196	0.34	-1.5
3,788,146	+		Sama_3196	0.34	+1.3
3,788,146	+		Sama_3196	0.34	-0.9
3,788,146	+		Sama_3196	0.34	-1.3
3,788,146	+		Sama_3196	0.34	+0.3
3,788,146	+		Sama_3196	0.34	-0.3
3,788,146	+		Sama_3196	0.34	-1.3
3,788,146	+		Sama_3196	0.34	-2.1
3,788,147	-		Sama_3196	0.34	-1.1
3,788,147	-		Sama_3196	0.34	-1.5
3,788,147	-		Sama_3196	0.34	+0.4
3,788,147	-		Sama_3196	0.34	-0.7
3,788,147	-		Sama_3196	0.34	-0.6
3,788,147	-		Sama_3196	0.34	-2.0
3,788,147	-		Sama_3196	0.34	-1.3
3,788,147	-		Sama_3196	0.34	-2.1
3,788,147	-		Sama_3196	0.34	-1.5
3,788,147	-		Sama_3196	0.34	+1.3
3,788,147	-		Sama_3196	0.34	-1.3
3,788,147	-		Sama_3196	0.34	-0.5
3,788,147	-		Sama_3196	0.34	-1.4
3,788,147	-		Sama_3196	0.34	+0.2
3,788,147	-		Sama_3196	0.34	-0.8
3,788,147	-		Sama_3196	0.34	-2.2
3,788,147	-		Sama_3196	0.34	+0.3
3,788,147	-		Sama_3196	0.34	-0.9
3,788,147	-		Sama_3196	0.34	-0.3
3,788,162	+		Sama_3196	0.36	-2.0
3,788,163	-		Sama_3196	0.36	-1.3
3,788,163	-		Sama_3196	0.36	+0.3
3,788,286	+		Sama_3196	0.45	-0.8
3,788,286	+		Sama_3196	0.45	-1.1
3,788,286	+		Sama_3196	0.45	-2.4
3,788,286	+		Sama_3196	0.45	-1.6
3,788,446	+		Sama_3196	0.56	-0.6
3,788,447	-		Sama_3196	0.56	-1.6
3,788,565	-		Sama_3196	0.65	+0.1
3,788,669	-		Sama_3196	0.73	-0.0
3,788,669	-		Sama_3196	0.73	-0.4
3,788,669	-		Sama_3196	0.73	-1.3
3,788,737	+		Sama_3196	0.78	-1.2
3,788,737	+		Sama_3196	0.78	-0.6
3,788,738	-		Sama_3196	0.78	-0.4
3,788,738	-		Sama_3196	0.78	+1.0
3,788,740	+		Sama_3196	0.78	-0.4
3,788,787	+		Sama_3196	0.81	-1.9
3,788,787	+		Sama_3196	0.81	-0.5
3,788,787	+		Sama_3196	0.81	-0.5
3,788,787	+		Sama_3196	0.81	-0.0
3,788,787	+		Sama_3196	0.81	-3.7
3,788,787	+		Sama_3196	0.81	-0.3
3,788,787	+		Sama_3196	0.81	+0.3
3,788,787	+		Sama_3196	0.81	-1.9
3,788,788	-		Sama_3196	0.81	-1.8
3,788,788	-		Sama_3196	0.81	-0.0
3,788,788	-		Sama_3196	0.81	-0.6
3,788,788	-		Sama_3196	0.81	-1.2
3,788,788	-		Sama_3196	0.81	-1.5
3,788,788	-		Sama_3196	0.81	-1.3
3,788,788	-		Sama_3196	0.81	-2.9
3,788,788	-		Sama_3196	0.81	-1.3
3,788,809	+		Sama_3196	0.83	-0.9
3,788,809	+		Sama_3196	0.83	-0.8
3,788,810	-		Sama_3196	0.83	+1.3
3,788,810	-		Sama_3196	0.83	-0.8
3,788,810	-		Sama_3196	0.83	-1.6
3,788,810	-		Sama_3196	0.83	-1.9
3,788,810	-		Sama_3196	0.83	-1.8
3,788,810	-		Sama_3196	0.83	-0.9
3,788,810	-		Sama_3196	0.83	-0.7
3,788,810	-		Sama_3196	0.83	-0.3
3,788,810	-		Sama_3196	0.83	-1.1
3,788,820	+		Sama_3196	0.84	-1.7
3,788,820	+		Sama_3196	0.84	-0.3
3,788,820	+		Sama_3196	0.84	+0.3
3,788,821	-		Sama_3196	0.84	-0.7
3,788,930	+				+0.1
3,788,930	+				-1.0
3,788,930	+				-0.2
3,788,931	-				-1.9
3,788,931	-				-1.1
3,788,931	-				+2.1
3,789,061	-				+0.0
3,789,061	-				+1.5
3,789,061	-				-0.1
3,789,061	-				+0.3
3,789,152	+		Sama_3197	0.14	-1.1
3,789,152	+		Sama_3197	0.14	-0.9
3,789,152	+		Sama_3197	0.14	+1.3
3,789,152	+		Sama_3197	0.14	+0.6
3,789,167	+		Sama_3197	0.15	-0.1
3,789,168	-		Sama_3197	0.15	+0.3
3,789,265	-		Sama_3197	0.25	-1.0
3,789,389	+		Sama_3197	0.37	-0.1
3,789,389	+		Sama_3197	0.37	-0.7
3,789,389	+		Sama_3197	0.37	-0.1
3,789,389	+		Sama_3197	0.37	+0.0
3,789,389	+		Sama_3197	0.37	-0.0
3,789,389	+		Sama_3197	0.37	+0.1
3,789,389	+		Sama_3197	0.37	+0.6
3,789,389	+		Sama_3197	0.37	-0.1
3,789,389	+		Sama_3197	0.37	+0.1
3,789,390	-		Sama_3197	0.37	-0.6
3,789,390	+		Sama_3197	0.37	-0.3
3,789,390	-		Sama_3197	0.37	-0.1
3,789,390	-		Sama_3197	0.37	-1.7
3,789,499	+		Sama_3197	0.47	-0.4
3,789,499	+		Sama_3197	0.47	-0.7
3,789,499	+		Sama_3197	0.47	-0.4
3,789,499	+		Sama_3197	0.47	+0.6
3,789,500	-		Sama_3197	0.47	-2.1
3,789,500	-		Sama_3197	0.47	-0.7
3,789,500	-		Sama_3197	0.47	+0.9
3,789,500	-		Sama_3197	0.47	-0.3
3,789,509	+		Sama_3197	0.48	+0.3
3,789,619	+		Sama_3197	0.59	-1.5
3,789,619	+		Sama_3197	0.59	+0.6
3,789,619	+		Sama_3197	0.59	+2.1
3,789,619	+		Sama_3197	0.59	-0.2
3,789,619	+		Sama_3197	0.59	-1.9
3,789,627	+		Sama_3197	0.59	-0.9
3,789,639	-		Sama_3197	0.61	+0.0
3,789,639	-		Sama_3197	0.61	-1.6
3,789,663	+		Sama_3197	0.63	-0.1
3,789,663	+		Sama_3197	0.63	-0.6
3,789,701	+		Sama_3197	0.66	-2.6
3,789,701	+		Sama_3197	0.66	+1.5
3,789,702	-		Sama_3197	0.67	+2.2
3,789,702	-		Sama_3197	0.67	-0.8
3,789,769	+		Sama_3197	0.73	-0.3
3,789,769	+		Sama_3197	0.73	+0.8
3,789,769	+		Sama_3197	0.73	-0.7
3,789,769	+		Sama_3197	0.73	-1.0
3,789,770	-		Sama_3197	0.73	-0.1
3,789,770	-		Sama_3197	0.73	+0.2
3,789,770	-		Sama_3197	0.73	-0.3
3,789,770	-		Sama_3197	0.73	-1.5
3,789,770	-		Sama_3197	0.73	-0.5
3,789,822	-		Sama_3197	0.78	+0.2
3,789,949	+				-0.5
3,789,949	+				+0.7
3,789,949	+				+1.9
3,789,950	-				+0.6
3,789,950	-				+0.7
3,790,036	+				-0.5
3,790,036	+				-1.3