Strain Fitness in Shewanella amazonensis SB2B around Sama_2957

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
3,519,951	+		Sama_2956	0.63	-1.2
3,519,955	+		Sama_2956	0.63	-0.3
3,519,955	+		Sama_2956	0.63	-3.3
3,519,955	+		Sama_2956	0.63	-0.8
3,519,955	+		Sama_2956	0.63	+0.5
3,519,956	-		Sama_2956	0.63	-0.2
3,519,956	-		Sama_2956	0.63	-0.4
3,519,956	-		Sama_2956	0.63	-0.0
3,519,956	-		Sama_2956	0.63	+0.3
3,519,959	+		Sama_2956	0.63	-0.6
3,519,960	-		Sama_2956	0.63	-0.5
3,520,030	+		Sama_2956	0.66	-0.4
3,520,040	-		Sama_2956	0.66	-1.6
3,520,071	+		Sama_2956	0.67	-0.3
3,520,072	-		Sama_2956	0.67	-0.1
3,520,072	-		Sama_2956	0.67	-1.4
3,520,072	-		Sama_2956	0.67	-1.8
3,520,075	-		Sama_2956	0.68	-2.5
3,520,075	-		Sama_2956	0.68	-2.5
3,520,075	-		Sama_2956	0.68	-0.1
3,520,075	-		Sama_2956	0.68	-0.5
3,520,108	-		Sama_2956	0.69	-0.2
3,520,136	+		Sama_2956	0.70	+0.7
3,520,137	-		Sama_2956	0.70	-0.4
3,520,137	-		Sama_2956	0.70	-0.7
3,520,142	+		Sama_2956	0.70	-0.9
3,520,142	+		Sama_2956	0.70	-0.5
3,520,224	+		Sama_2956	0.73	-0.1
3,520,224	+		Sama_2956	0.73	+0.3
3,520,224	+		Sama_2956	0.73	-0.4
3,520,308	+		Sama_2956	0.76	-0.5
3,520,308	+		Sama_2956	0.76	-0.2
3,520,309	-		Sama_2956	0.77	-2.3
3,520,309	-		Sama_2956	0.77	+0.2
3,520,309	-		Sama_2956	0.77	-0.4
3,520,330	-		Sama_2956	0.77	+0.1
3,520,430	+		Sama_2956	0.81	-0.3
3,520,464	-		Sama_2956	0.82	-0.3
3,520,464	-		Sama_2956	0.82	+0.6
3,520,661	+		Sama_2956	0.90	+0.0
3,520,730	+				-0.9
3,520,823	+				-1.2
3,520,823	+				-0.5
3,520,824	-				+0.3
3,520,924	+				-1.8
3,520,925	-				-1.3
3,520,933	-				+1.6
3,520,933	-				-1.7
3,520,933	-				-0.6
3,520,939	+				-2.1
3,520,940	-				-1.8
3,520,981	+				-0.1
3,520,981	+				+0.0
3,520,981	+				-0.6
3,520,981	+				-0.1
3,520,981	+				+0.5
3,520,982	-				-1.6
3,520,982	-				-0.6
3,521,068	+		Sama_2957	0.12	+0.8
3,521,137	+		Sama_2957	0.18	-2.1
3,521,137	+		Sama_2957	0.18	+0.1
3,521,138	-		Sama_2957	0.18	+0.5
3,521,159	+		Sama_2957	0.19	+0.2
3,521,159	+		Sama_2957	0.19	-0.3
3,521,159	+		Sama_2957	0.19	-0.8
3,521,159	+		Sama_2957	0.19	+1.8
3,521,287	-		Sama_2957	0.30	-0.5
3,521,431	+		Sama_2957	0.42	-1.6
3,521,447	+		Sama_2957	0.43	-0.4
3,521,448	-		Sama_2957	0.43	-0.7
3,521,448	-		Sama_2957	0.43	+0.8
3,521,588	+		Sama_2957	0.55	-1.5
3,521,624	+		Sama_2957	0.58	-1.6
3,521,624	+		Sama_2957	0.58	+0.0
3,521,624	+		Sama_2957	0.58	-0.8
3,521,624	+		Sama_2957	0.58	-1.6
3,521,625	-		Sama_2957	0.58	-1.7
3,521,625	-		Sama_2957	0.58	-0.4
3,521,625	-		Sama_2957	0.58	-1.5
3,521,625	-		Sama_2957	0.58	-1.2
3,521,625	-		Sama_2957	0.58	-0.9
3,521,627	+		Sama_2957	0.58	-2.1
3,521,627	+		Sama_2957	0.58	-0.5
3,521,627	+		Sama_2957	0.58	-1.4
3,521,627	+		Sama_2957	0.58	+0.3
3,521,627	+		Sama_2957	0.58	-1.0
3,521,627	+		Sama_2957	0.58	+0.0
3,521,628	-		Sama_2957	0.58	+0.1
3,521,628	-		Sama_2957	0.58	+1.9
3,521,628	-		Sama_2957	0.58	-0.2
3,521,628	-		Sama_2957	0.58	-2.6
3,521,630	+		Sama_2957	0.59	+0.9
3,521,651	-		Sama_2957	0.60	-1.0
3,521,664	+		Sama_2957	0.61	-1.0
3,521,665	-		Sama_2957	0.62	-1.6
3,521,665	-		Sama_2957	0.62	-0.8
3,521,940	+		Sama_2957	0.84	+0.2
3,521,941	-		Sama_2957	0.84	+0.2
3,521,941	-		Sama_2957	0.84	-1.2
3,521,941	-		Sama_2957	0.84	-0.1
3,521,941	-		Sama_2957	0.84	+0.1
3,521,948	-		Sama_2957	0.85	-0.4
3,521,965	+		Sama_2957	0.86	-0.3
3,521,990	-		Sama_2957	0.89	-0.5
3,522,011	-				-1.8
3,522,011	-				-0.1
3,522,044	+				-0.4
3,522,104	+				-0.5
3,522,104	+				+0.5
3,522,104	+				+0.7
3,522,104	+				-0.7
3,522,104	+				-1.1
3,522,104	+				-0.8
3,522,104	+				-0.4
3,522,104	+				-0.0
3,522,104	+				+0.3
3,522,105	-				-0.6
3,522,105	-				+0.0
3,522,106	+				-0.9
3,522,107	-				-0.4
3,522,107	-				+1.8
3,522,107	-				+1.9
3,522,107	-				-1.5
3,522,107	-				-0.4
3,522,125	+				-0.0
3,522,125	+				-0.8
3,522,126	-				+0.6
3,522,152	-				+0.6
3,522,152	-				+0.0
3,522,180	+				+0.4
3,522,180	+				+0.8
3,522,180	+				+0.0
3,522,180	+				-0.4
3,522,180	+				+0.8
3,522,181	-				-0.8
3,522,181	-				+0.1
3,522,181	-				+0.1
3,522,181	-				-0.5
3,522,181	-				-0.8
3,522,184	+				-0.6
3,522,185	-				+1.2
3,522,238	+				+1.3
3,522,238	+				+1.9
3,522,238	+				+1.2
3,522,238	+				-1.4
3,522,239	-				-0.9
3,522,243	+				-0.3
3,522,248	+				-1.1
3,522,258	+				-0.8
3,522,258	+				+0.8
3,522,258	+				+0.4
3,522,259	-				+0.4
3,522,259	-				-0.4
3,522,259	-				-0.5
3,522,305	+				-0.4
3,522,305	+				+0.2
3,522,306	-				+0.8
3,522,316	-				+0.0
3,522,316	-				-1.4
3,522,418	-		Sama_2958	0.27	+0.2
3,522,418	-		Sama_2958	0.27	+2.0
3,522,418	-		Sama_2958	0.27	+0.4
3,522,418	-		Sama_2958	0.27	+0.1
3,522,522	+		Sama_2958	0.55	-1.0
3,522,523	-		Sama_2958	0.55	+1.4
3,522,523	-		Sama_2958	0.55	-1.1
3,522,523	-		Sama_2958	0.55	-0.3
3,522,600	+		Sama_2958	0.76	-0.6
3,522,600	+		Sama_2958	0.76	-0.8
3,522,600	+		Sama_2958	0.76	-0.6
3,522,600	+		Sama_2958	0.76	+0.5
3,522,600	+		Sama_2958	0.76	+0.2
3,522,600	+		Sama_2958	0.76	+0.2
3,522,600	+		Sama_2958	0.76	+1.7
3,522,600	+		Sama_2958	0.76	-0.5
3,522,600	+		Sama_2958	0.76	-1.3
3,522,600	+		Sama_2958	0.76	+0.0
3,522,600	+		Sama_2958	0.76	-0.3
3,522,600	+		Sama_2958	0.76	-0.8
3,522,600	+		Sama_2958	0.76	+0.9
3,522,600	+		Sama_2958	0.76	-0.7
3,522,600	+		Sama_2958	0.76	+1.5
3,522,600	+		Sama_2958	0.76	+1.3
3,522,600	+		Sama_2958	0.76	+0.2
3,522,601	-		Sama_2958	0.77	-0.9
3,522,601	-		Sama_2958	0.77	+1.0
3,522,601	-		Sama_2958	0.77	-0.2
3,522,601	-		Sama_2958	0.77	-0.1
3,522,601	-		Sama_2958	0.77	-0.4
3,522,601	-		Sama_2958	0.77	+0.3
3,522,601	-		Sama_2958	0.77	+0.0
3,522,601	-		Sama_2958	0.77	-0.1
3,522,601	-		Sama_2958	0.77	-1.4
3,522,602	+		Sama_2958	0.77	+0.1
3,522,602	+		Sama_2958	0.77	-0.5
3,522,603	-		Sama_2958	0.77	-0.2
3,522,603	-		Sama_2958	0.77	-0.4
3,522,603	-		Sama_2958	0.77	+0.4
3,522,648	-		Sama_2958	0.89	-0.1
3,522,719	-				-0.6
3,522,747	-				+0.6
3,522,747	-				-0.1
3,522,747	-				-0.2
3,522,820	+				-0.6
3,522,853	+				+0.2
3,522,854	-				+1.5
3,522,974	-				-0.1
3,522,974	-				+0.2
3,522,995	-				+0.6
3,523,012	+				+0.7
3,523,012	+				-0.5
3,523,013	-				+0.5
3,523,015	+				+1.3
3,523,015	+				+0.4
3,523,020	+				-0.4
3,523,020	+				-0.8
3,523,020	+				+0.4
3,523,020	+				+0.5
3,523,021	-				-0.8
3,523,021	-				+0.3
3,523,021	-				+1.2
3,523,025	+				-0.8
3,523,025	+				-1.8
3,523,026	-				-1.2
3,523,026	-				-1.0
3,523,026	-				-0.4