Experiment: D,L-Lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_2431 and motB are separated by 238 nucleotides motB and Sama_2433 are separated by 4 nucleotides
Sama_2431: Sama_2431 - thiamine biosynthesis protein ThiI (RefSeq), at 2,924,723 to 2,926,177
_2431
Sama_2432: motB - flagellar motor protein MotB (RefSeq), at 2,926,416 to 2,927,354
motB
Sama_2433: Sama_2433 - flagellar motor protein PomA (RefSeq), at 2,927,359 to 2,928,126
_2433
Position (kb)
2926
2927
2928 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 2925.905 kb on - strand, within Sama_2431 at 2926.243 kb on - strand at 2926.243 kb on - strand at 2926.243 kb on - strand at 2926.244 kb on + strand at 2926.244 kb on + strand at 2926.245 kb on - strand at 2926.313 kb on + strand at 2926.313 kb on + strand at 2926.314 kb on - strand at 2926.314 kb on - strand at 2926.341 kb on + strand at 2926.376 kb on + strand at 2926.377 kb on - strand at 2926.377 kb on - strand at 2926.418 kb on - strand at 2926.421 kb on + strand at 2926.422 kb on - strand at 2926.422 kb on - strand at 2926.422 kb on - strand at 2926.422 kb on - strand at 2926.443 kb on + strand at 2926.443 kb on + strand at 2926.444 kb on - strand at 2926.444 kb on - strand at 2926.444 kb on - strand at 2926.444 kb on - strand at 2926.541 kb on + strand, within motB at 2926.596 kb on + strand, within motB at 2926.655 kb on - strand, within motB at 2926.655 kb on - strand, within motB at 2926.701 kb on - strand, within motB at 2926.701 kb on - strand, within motB at 2926.723 kb on - strand, within motB at 2926.723 kb on - strand, within motB at 2926.723 kb on - strand, within motB at 2926.814 kb on + strand, within motB at 2926.814 kb on + strand, within motB at 2926.815 kb on - strand, within motB at 2926.908 kb on - strand, within motB at 2926.908 kb on - strand, within motB at 2926.908 kb on - strand, within motB at 2926.908 kb on - strand, within motB at 2926.908 kb on - strand, within motB at 2927.156 kb on + strand, within motB at 2927.174 kb on + strand, within motB at 2927.174 kb on + strand, within motB at 2927.175 kb on - strand, within motB at 2927.175 kb on - strand, within motB at 2927.175 kb on - strand, within motB at 2927.175 kb on - strand, within motB at 2927.194 kb on + strand, within motB at 2927.195 kb on - strand, within motB at 2927.195 kb on - strand, within motB at 2927.195 kb on - strand, within motB at 2927.202 kb on - strand, within motB at 2927.202 kb on - strand, within motB at 2927.202 kb on - strand, within motB at 2927.354 kb on + strand at 2927.380 kb on + strand at 2927.475 kb on + strand, within Sama_2433 at 2927.481 kb on + strand, within Sama_2433 at 2927.505 kb on + strand, within Sama_2433 at 2927.505 kb on + strand, within Sama_2433 at 2927.505 kb on + strand, within Sama_2433 at 2927.521 kb on - strand, within Sama_2433 at 2927.556 kb on + strand, within Sama_2433 at 2927.556 kb on + strand, within Sama_2433 at 2927.557 kb on - strand, within Sama_2433 at 2927.557 kb on - strand, within Sama_2433 at 2927.565 kb on - strand, within Sama_2433 at 2927.565 kb on - strand, within Sama_2433 at 2927.576 kb on - strand, within Sama_2433 at 2927.655 kb on + strand, within Sama_2433 at 2927.703 kb on + strand, within Sama_2433 at 2927.703 kb on + strand, within Sama_2433 at 2927.703 kb on + strand, within Sama_2433 at 2927.704 kb on - strand, within Sama_2433 at 2927.704 kb on - strand, within Sama_2433 at 2927.707 kb on + strand, within Sama_2433 at 2927.707 kb on + strand, within Sama_2433 at 2927.707 kb on + strand, within Sama_2433 at 2927.707 kb on + strand, within Sama_2433 at 2927.708 kb on - strand, within Sama_2433 at 2927.708 kb on - strand, within Sama_2433 at 2927.708 kb on - strand, within Sama_2433 at 2927.708 kb on - strand, within Sama_2433 at 2927.708 kb on - strand, within Sama_2433 at 2927.708 kb on - strand, within Sama_2433 at 2927.708 kb on - strand, within Sama_2433 at 2927.708 kb on - strand, within Sama_2433 at 2927.743 kb on - strand, within Sama_2433 at 2927.814 kb on + strand, within Sama_2433 at 2927.929 kb on - strand, within Sama_2433 at 2927.929 kb on - strand, within Sama_2433 at 2928.013 kb on + strand, within Sama_2433 at 2928.014 kb on - strand, within Sama_2433 at 2928.019 kb on - strand, within Sama_2433 at 2928.137 kb on + strand at 2928.138 kb on - strand at 2928.142 kb on - strand at 2928.209 kb on + strand at 2928.210 kb on - strand at 2928.210 kb on - strand at 2928.210 kb on - strand at 2928.212 kb on + strand at 2928.213 kb on - strand at 2928.224 kb on + strand at 2928.224 kb on + strand at 2928.224 kb on + strand at 2928.225 kb on - strand at 2928.225 kb on - strand at 2928.225 kb on - strand at 2928.226 kb on + strand at 2928.227 kb on - strand at 2928.238 kb on + strand at 2928.238 kb on + strand at 2928.238 kb on + strand at 2928.238 kb on + strand at 2928.238 kb on + strand at 2928.238 kb on + strand at 2928.238 kb on + strand at 2928.239 kb on - strand at 2928.239 kb on - strand at 2928.239 kb on - strand at 2928.239 kb on - strand at 2928.239 kb on - strand at 2928.239 kb on - strand at 2928.239 kb on - strand at 2928.239 kb on - strand at 2928.239 kb on - strand at 2928.239 kb on - strand at 2928.258 kb on + strand at 2928.268 kb on + strand at 2928.269 kb on - strand at 2928.350 kb on + strand at 2928.350 kb on + strand at 2928.351 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate remove 2,925,905 - Sama_2431 0.81 -0.8 2,926,243 - +0.7 2,926,243 - -0.7 2,926,243 - +0.6 2,926,244 + -0.7 2,926,244 + +2.2 2,926,245 - -0.4 2,926,313 + +1.1 2,926,313 + +0.4 2,926,314 - -0.3 2,926,314 - -0.4 2,926,341 + -1.7 2,926,376 + -0.8 2,926,377 - -0.8 2,926,377 - -0.7 2,926,418 - -0.1 2,926,421 + +1.1 2,926,422 - +0.1 2,926,422 - +0.2 2,926,422 - +0.9 2,926,422 - +1.3 2,926,443 + +0.7 2,926,443 + +2.4 2,926,444 - -0.5 2,926,444 - -0.4 2,926,444 - +0.1 2,926,444 - +0.9 2,926,541 + motB Sama_2432 0.13 +1.3 2,926,596 + motB Sama_2432 0.19 +1.0 2,926,655 - motB Sama_2432 0.25 +2.5 2,926,655 - motB Sama_2432 0.25 +3.2 2,926,701 - motB Sama_2432 0.30 +2.4 2,926,701 - motB Sama_2432 0.30 +2.3 2,926,723 - motB Sama_2432 0.33 +3.1 2,926,723 - motB Sama_2432 0.33 +2.2 2,926,723 - motB Sama_2432 0.33 +2.7 2,926,814 + motB Sama_2432 0.42 +3.1 2,926,814 + motB Sama_2432 0.42 +4.4 2,926,815 - motB Sama_2432 0.42 +2.6 2,926,908 - motB Sama_2432 0.52 +1.0 2,926,908 - motB Sama_2432 0.52 +2.5 2,926,908 - motB Sama_2432 0.52 +2.3 2,926,908 - motB Sama_2432 0.52 +3.7 2,926,908 - motB Sama_2432 0.52 +2.6 2,927,156 + motB Sama_2432 0.79 +1.6 2,927,174 + motB Sama_2432 0.81 +4.8 2,927,174 + motB Sama_2432 0.81 +2.6 2,927,175 - motB Sama_2432 0.81 +1.4 2,927,175 - motB Sama_2432 0.81 +2.6 2,927,175 - motB Sama_2432 0.81 +2.9 2,927,175 - motB Sama_2432 0.81 +1.9 2,927,194 + motB Sama_2432 0.83 +0.7 2,927,195 - motB Sama_2432 0.83 +1.4 2,927,195 - motB Sama_2432 0.83 +0.5 2,927,195 - motB Sama_2432 0.83 +2.6 2,927,202 - motB Sama_2432 0.84 +3.4 2,927,202 - motB Sama_2432 0.84 +3.6 2,927,202 - motB Sama_2432 0.84 +2.1 2,927,354 + +2.2 2,927,380 + +2.2 2,927,475 + Sama_2433 0.15 +3.4 2,927,481 + Sama_2433 0.16 -0.3 2,927,505 + Sama_2433 0.19 +2.7 2,927,505 + Sama_2433 0.19 -0.1 2,927,505 + Sama_2433 0.19 +2.2 2,927,521 - Sama_2433 0.21 +1.5 2,927,556 + Sama_2433 0.26 +1.3 2,927,556 + Sama_2433 0.26 +3.2 2,927,557 - Sama_2433 0.26 +0.5 2,927,557 - Sama_2433 0.26 +2.8 2,927,565 - Sama_2433 0.27 +2.1 2,927,565 - Sama_2433 0.27 +2.7 2,927,576 - Sama_2433 0.28 +2.4 2,927,655 + Sama_2433 0.39 +3.0 2,927,703 + Sama_2433 0.45 +1.5 2,927,703 + Sama_2433 0.45 +1.5 2,927,703 + Sama_2433 0.45 +2.0 2,927,704 - Sama_2433 0.45 +2.7 2,927,704 - Sama_2433 0.45 +2.2 2,927,707 + Sama_2433 0.45 -0.7 2,927,707 + Sama_2433 0.45 +1.9 2,927,707 + Sama_2433 0.45 +2.5 2,927,707 + Sama_2433 0.45 +2.5 2,927,708 - Sama_2433 0.45 +1.8 2,927,708 - Sama_2433 0.45 +1.8 2,927,708 - Sama_2433 0.45 +2.3 2,927,708 - Sama_2433 0.45 +1.9 2,927,708 - Sama_2433 0.45 +2.0 2,927,708 - Sama_2433 0.45 +0.3 2,927,708 - Sama_2433 0.45 +1.9 2,927,708 - Sama_2433 0.45 +2.6 2,927,743 - Sama_2433 0.50 +2.9 2,927,814 + Sama_2433 0.59 +2.4 2,927,929 - Sama_2433 0.74 +2.5 2,927,929 - Sama_2433 0.74 +2.8 2,928,013 + Sama_2433 0.85 +2.4 2,928,014 - Sama_2433 0.85 +2.0 2,928,019 - Sama_2433 0.86 +2.2 2,928,137 + +2.2 2,928,138 - +1.9 2,928,142 - -0.9 2,928,209 + +0.7 2,928,210 - -0.7 2,928,210 - -0.5 2,928,210 - +0.6 2,928,212 + +0.6 2,928,213 - -0.3 2,928,224 + -0.9 2,928,224 + +1.2 2,928,224 + +1.4 2,928,225 - +0.1 2,928,225 - +0.8 2,928,225 - -0.4 2,928,226 + -1.1 2,928,227 - +0.3 2,928,238 + +1.2 2,928,238 + +0.7 2,928,238 + -1.4 2,928,238 + +0.6 2,928,238 + +2.6 2,928,238 + +0.9 2,928,238 + +1.0 2,928,239 - +0.9 2,928,239 - +0.4 2,928,239 - -0.7 2,928,239 - +0.8 2,928,239 - +0.5 2,928,239 - -1.0 2,928,239 - +2.2 2,928,239 - -0.3 2,928,239 - +0.5 2,928,239 - +1.4 2,928,258 + +1.1 2,928,268 + +0.7 2,928,269 - +0.7 2,928,350 + -0.0 2,928,350 + -0.4 2,928,351 - -1.2
Or see this region's nucleotide sequence