Strain Fitness in Shewanella amazonensis SB2B around Sama_2406

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
2,890,740	-		Sama_2405	0.69	+0.9
2,890,768	+		Sama_2405	0.70	-0.4
2,890,768	+		Sama_2405	0.70	+0.4
2,890,779	+		Sama_2405	0.70	-0.7
2,890,779	+		Sama_2405	0.70	+0.2
2,890,868	+		Sama_2405	0.74	+0.9
2,890,869	-		Sama_2405	0.74	+0.3
2,890,890	+		Sama_2405	0.75	+1.2
2,890,891	-		Sama_2405	0.75	+0.1
2,890,891	-		Sama_2405	0.75	+0.1
2,890,891	-		Sama_2405	0.75	-0.7
2,890,894	+		Sama_2405	0.76	-0.4
2,890,894	+		Sama_2405	0.76	+0.6
2,890,895	-		Sama_2405	0.76	-0.4
2,890,895	-		Sama_2405	0.76	-0.7
2,890,895	-		Sama_2405	0.76	-0.5
2,890,895	-		Sama_2405	0.76	-0.9
2,890,895	-		Sama_2405	0.76	-1.9
2,890,903	+		Sama_2405	0.76	-0.8
2,890,904	-		Sama_2405	0.76	-0.3
2,890,904	-		Sama_2405	0.76	+2.1
2,890,904	-		Sama_2405	0.76	+0.9
2,890,906	+		Sama_2405	0.76	+0.2
2,890,906	+		Sama_2405	0.76	+1.0
2,890,906	+		Sama_2405	0.76	-0.1
2,890,907	-		Sama_2405	0.76	-0.7
2,890,925	+		Sama_2405	0.77	-1.2
2,890,925	+		Sama_2405	0.77	+0.2
2,890,925	+		Sama_2405	0.77	-0.1
2,890,925	+		Sama_2405	0.77	-0.9
2,890,925	+		Sama_2405	0.77	-0.9
2,890,925	+		Sama_2405	0.77	+0.1
2,890,925	+		Sama_2405	0.77	+0.1
2,890,925	+		Sama_2405	0.77	+0.6
2,890,926	-		Sama_2405	0.77	+0.3
2,890,926	-		Sama_2405	0.77	+1.1
2,890,926	-		Sama_2405	0.77	-0.4
2,890,956	+		Sama_2405	0.78	+1.0
2,890,956	+		Sama_2405	0.78	+0.4
2,890,956	+		Sama_2405	0.78	+0.1
2,890,957	-		Sama_2405	0.78	+0.5
2,890,957	-		Sama_2405	0.78	+0.9
2,890,957	-		Sama_2405	0.78	+0.0
2,890,983	+		Sama_2405	0.79	+0.7
2,890,983	+		Sama_2405	0.79	+1.1
2,890,983	+		Sama_2405	0.79	+2.1
2,890,984	-		Sama_2405	0.80	+1.2
2,890,984	-		Sama_2405	0.80	+0.9
2,891,043	-		Sama_2405	0.82	-0.7
2,891,043	-		Sama_2405	0.82	-0.1
2,891,043	-		Sama_2405	0.82	+0.2
2,891,079	+		Sama_2405	0.84	+0.0
2,891,079	+		Sama_2405	0.84	+1.5
2,891,080	-		Sama_2405	0.84	+0.2
2,891,080	-		Sama_2405	0.84	-0.7
2,891,090	-		Sama_2405	0.84	-0.4
2,891,105	-		Sama_2405	0.85	+1.2
2,891,105	-		Sama_2405	0.85	+0.1
2,891,125	-		Sama_2405	0.86	+0.9
2,891,125	-		Sama_2405	0.86	+0.9
2,891,137	-		Sama_2405	0.86	-1.1
2,891,193	+		Sama_2405	0.89	+0.2
2,891,193	+		Sama_2405	0.89	+0.8
2,891,193	+		Sama_2405	0.89	+0.0
2,891,194	-		Sama_2405	0.89	-1.0
2,891,287	+				+0.7
2,891,288	-				-3.3
2,891,288	-				+1.2
2,891,288	-				+0.9
2,891,299	+				-0.4
2,891,299	+				-1.3
2,891,299	+				+1.0
2,891,299	+				-0.3
2,891,300	-				+1.5
2,891,300	-				+0.3
2,891,300	-				-0.6
2,891,300	-				-1.0
2,891,452	+				+0.7
2,891,452	+				-0.1
2,891,452	+				-0.2
2,891,453	-				-0.1
2,891,453	-				-0.2
2,891,453	-				-0.2
2,891,461	+				-1.6
2,891,519	+				-2.3
2,891,519	+				-2.5
2,891,519	+				-2.3
2,891,520	-				-1.0
2,891,520	-				-2.3
2,891,520	-				+0.4
2,891,523	+				-1.1
2,891,523	+				-0.7
2,891,524	-				+0.9
2,891,527	+				-2.1
2,891,527	+				-3.3
2,891,527	+				-1.6
2,891,527	+				-1.7
2,891,527	+				-1.8
2,891,527	+				-2.6
2,891,528	-				+0.2
2,891,528	-				+0.0
2,891,528	-				-0.4
2,891,528	-				-0.6
2,891,528	-				+0.6
2,891,528	-				-1.7
2,891,531	+				-1.6
2,891,531	+				-3.4
2,891,532	-				-1.4
2,891,536	+				-1.9
2,891,536	+				-1.9
2,891,536	+				-1.6
2,891,537	-				-3.3
2,891,570	-				+0.6
2,891,671	+				-1.4
2,891,671	+				+0.7
2,891,684	-				+1.5
2,891,688	+				-0.4
2,891,689	-				+1.9
2,891,689	-				+2.4
2,891,689	-				+1.6
2,891,699	-				+1.5
2,891,700	+				-0.7
2,891,766	+				+1.2
2,891,840	+				+2.1
2,891,840	+				+0.9
2,891,840	+				+2.0
2,891,841	-				+1.4
2,891,901	+				+1.0
2,891,902	-				+0.9
2,891,902	-				+1.7
2,891,910	+				+1.0
2,891,910	+				+1.2
2,891,911	-				+0.9
2,891,911	-				+1.9
2,891,958	+				+1.7
2,891,958	+				+0.7
2,891,963	+				+2.0
2,891,964	-				+0.9
2,892,006	+		Sama_2406	0.11	+1.7
2,892,006	+		Sama_2406	0.11	+0.4
2,892,007	-		Sama_2406	0.12	+0.7
2,892,007	-		Sama_2406	0.12	+1.8
2,892,007	-		Sama_2406	0.12	+1.3
2,892,007	-		Sama_2406	0.12	+2.3
2,892,010	+		Sama_2406	0.12	+1.9
2,892,011	-		Sama_2406	0.12	+1.5
2,892,011	-		Sama_2406	0.12	+1.4
2,892,112	+		Sama_2406	0.16	+1.5
2,892,113	-		Sama_2406	0.16	+1.8
2,892,147	+		Sama_2406	0.17	+2.0
2,892,147	+		Sama_2406	0.17	+1.4
2,892,147	+		Sama_2406	0.17	+1.7
2,892,147	+		Sama_2406	0.17	+1.3
2,892,147	+		Sama_2406	0.17	+1.3
2,892,147	+		Sama_2406	0.17	+1.9
2,892,148	-		Sama_2406	0.17	+1.0
2,892,148	-		Sama_2406	0.17	+2.4
2,892,148	-		Sama_2406	0.17	+1.8
2,892,148	-		Sama_2406	0.17	+1.5
2,892,148	-		Sama_2406	0.17	+1.5
2,892,148	-		Sama_2406	0.17	+0.9
2,892,148	-		Sama_2406	0.17	+2.1
2,892,150	+		Sama_2406	0.18	-0.5
2,892,150	+		Sama_2406	0.18	+1.2
2,892,362	+		Sama_2406	0.26	+1.6
2,892,365	-		Sama_2406	0.27	+1.5
2,892,365	-		Sama_2406	0.27	+2.2
2,892,397	+		Sama_2406	0.28	+2.2
2,892,397	+		Sama_2406	0.28	+2.6
2,892,397	+		Sama_2406	0.28	+0.4
2,892,397	+		Sama_2406	0.28	+1.0
2,892,398	-		Sama_2406	0.28	-1.4
2,892,489	-		Sama_2406	0.32	+1.1
2,892,524	+		Sama_2406	0.33	+1.9
2,892,557	+		Sama_2406	0.35	+1.0
2,892,558	-		Sama_2406	0.35	+1.7
2,892,615	+		Sama_2406	0.37	+1.2
2,892,683	+		Sama_2406	0.40	+1.4
2,892,683	+		Sama_2406	0.40	+0.8
2,892,683	+		Sama_2406	0.40	+2.9
2,892,684	-		Sama_2406	0.40	+1.9
2,892,684	-		Sama_2406	0.40	+0.9
2,892,684	-		Sama_2406	0.40	+1.8
2,892,718	-		Sama_2406	0.41	+1.9
2,892,718	-		Sama_2406	0.41	+1.6
2,892,735	+		Sama_2406	0.42	+1.2
2,892,735	+		Sama_2406	0.42	+1.9
2,892,736	-		Sama_2406	0.42	+1.0
2,892,766	+		Sama_2406	0.43	+1.7
2,892,766	+		Sama_2406	0.43	+0.9
2,892,766	+		Sama_2406	0.43	+1.2
2,892,766	+		Sama_2406	0.43	+1.7
2,892,767	-		Sama_2406	0.44	+0.9
2,892,767	-		Sama_2406	0.44	+2.0
2,892,767	-		Sama_2406	0.44	+1.5
2,892,767	-		Sama_2406	0.44	+2.2
2,892,767	-		Sama_2406	0.44	+1.0
2,892,767	-		Sama_2406	0.44	+1.2
2,892,861	+		Sama_2406	0.47	+0.9
2,892,861	+		Sama_2406	0.47	+3.2
2,892,861	+		Sama_2406	0.47	+1.3
2,892,861	+		Sama_2406	0.47	+2.0
2,892,862	-		Sama_2406	0.48	+2.2
2,892,862	-		Sama_2406	0.48	+2.0
2,892,862	-		Sama_2406	0.48	+1.8
2,892,862	-		Sama_2406	0.48	+1.5
2,892,862	-		Sama_2406	0.48	+0.4
2,892,865	+		Sama_2406	0.48	+1.6
2,892,865	+		Sama_2406	0.48	+1.5
2,892,865	+		Sama_2406	0.48	+0.9
2,892,866	-		Sama_2406	0.48	+2.0
2,892,949	+		Sama_2406	0.51	+1.0
2,892,949	+		Sama_2406	0.51	+1.0
2,892,950	-		Sama_2406	0.51	+1.3
2,892,950	-		Sama_2406	0.51	+1.3
2,893,014	+		Sama_2406	0.54	+1.3
2,893,015	-		Sama_2406	0.54	+0.1
2,893,015	-		Sama_2406	0.54	+1.1
2,893,015	-		Sama_2406	0.54	+1.6
2,893,015	-		Sama_2406	0.54	+1.6
2,893,116	+		Sama_2406	0.58	+2.6
2,893,127	+		Sama_2406	0.59	+1.6
2,893,127	+		Sama_2406	0.59	+0.7
2,893,127	+		Sama_2406	0.59	+0.9
2,893,128	-		Sama_2406	0.59	-1.2
2,893,128	-		Sama_2406	0.59	+1.3
2,893,138	+		Sama_2406	0.59	+0.1
2,893,139	-		Sama_2406	0.59	+0.9
2,893,190	+		Sama_2406	0.61	+0.8
2,893,198	-		Sama_2406	0.62	+2.9
2,893,278	+		Sama_2406	0.65	+0.3
2,893,278	+		Sama_2406	0.65	+2.0
2,893,278	+		Sama_2406	0.65	+0.5
2,893,278	+		Sama_2406	0.65	+2.7
2,893,278	+		Sama_2406	0.65	+2.1
2,893,278	+		Sama_2406	0.65	+0.7
2,893,279	-		Sama_2406	0.65	+1.6
2,893,279	-		Sama_2406	0.65	+1.2
2,893,309	+		Sama_2406	0.66	+1.2
2,893,508	+		Sama_2406	0.75	+1.2
2,893,538	+		Sama_2406	0.76	+1.6
2,893,585	+		Sama_2406	0.78	+1.6
2,893,586	-		Sama_2406	0.78	+1.2
2,893,603	-		Sama_2406	0.79	+0.7
2,893,634	+		Sama_2406	0.80	+0.9
2,893,635	-		Sama_2406	0.80	+1.9
2,893,671	+		Sama_2406	0.82	+2.3
2,893,671	+		Sama_2406	0.82	+1.4
2,893,672	-		Sama_2406	0.82	+1.2
2,893,672	-		Sama_2406	0.82	+1.3
2,893,825	+		Sama_2406	0.88	+1.9
2,893,826	-		Sama_2406	0.88	+1.2
2,893,836	+		Sama_2406	0.89	+1.7
2,893,836	+		Sama_2406	0.89	+1.5
2,893,836	+		Sama_2406	0.89	+1.3
2,893,837	-		Sama_2406	0.89	+1.2
2,893,837	-		Sama_2406	0.89	+0.4
2,893,882	+				+1.2
2,893,883	-				+2.6
2,893,883	-				+1.4
2,893,883	-				+2.1
2,893,925	+				+0.9
2,893,927	+				+1.2
2,893,927	+				+0.5
2,893,927	+				+0.4
2,893,928	-				+3.0
2,893,928	-				+1.4
2,893,928	-				+0.7
2,893,928	-				-0.9
2,893,961	-				+2.5
2,893,962	+				+1.8
2,893,962	+				+0.6
2,893,962	+				+1.5
2,893,962	+				+2.0
2,893,963	-				+1.8
2,893,963	-				+1.6
2,893,963	-				+2.5
2,893,963	-				+0.9
2,894,090	+				+0.3
2,894,158	+				+0.0
2,894,158	+				+0.9
2,894,177	-				-2.1
2,894,204	-				-0.1
2,894,204	-				+0.2
2,894,204	-				-0.1
2,894,242	+				+0.1
2,894,242	+				-0.4
2,894,243	-				-0.7
2,894,259	-				-1.5
2,894,291	+		Sama_2407	0.11	-0.7
2,894,292	-		Sama_2407	0.11	+1.8
2,894,292	-		Sama_2407	0.11	-0.1
2,894,292	-		Sama_2407	0.11	+0.8
2,894,292	-		Sama_2407	0.11	+0.2
2,894,292	-		Sama_2407	0.11	+0.9
2,894,292	-		Sama_2407	0.11	+0.3
2,894,329	+		Sama_2407	0.15	+2.7
2,894,329	+		Sama_2407	0.15	-0.3
2,894,329	+		Sama_2407	0.15	+0.3
2,894,329	+		Sama_2407	0.15	-0.7
2,894,330	-		Sama_2407	0.15	-0.4
2,894,330	-		Sama_2407	0.15	-3.3
2,894,330	-		Sama_2407	0.15	-0.6
2,894,330	-		Sama_2407	0.15	-1.0
2,894,330	-		Sama_2407	0.15	-0.6
2,894,352	-		Sama_2407	0.17	+0.2
2,894,374	+		Sama_2407	0.19	-0.7
2,894,375	-		Sama_2407	0.19	+0.3
2,894,375	-		Sama_2407	0.19	-1.4
2,894,375	-		Sama_2407	0.19	+0.2
2,894,399	-		Sama_2407	0.22	-1.2
2,894,404	+		Sama_2407	0.22	+1.0
2,894,405	-		Sama_2407	0.22	-0.4
2,894,405	-		Sama_2407	0.22	-0.3
2,894,424	+		Sama_2407	0.24	-1.3
2,894,425	-		Sama_2407	0.24	-0.3
2,894,425	-		Sama_2407	0.24	-0.3
2,894,425	-		Sama_2407	0.24	+0.1
2,894,425	-		Sama_2407	0.24	+0.9
2,894,426	+		Sama_2407	0.24	-0.5
2,894,427	-		Sama_2407	0.24	-0.1
2,894,427	-		Sama_2407	0.24	-0.9
2,894,427	-		Sama_2407	0.24	-0.5
2,894,440	+		Sama_2407	0.26	+0.6
2,894,440	+		Sama_2407	0.26	+0.9
2,894,441	-		Sama_2407	0.26	+0.6
2,894,521	+		Sama_2407	0.33	-1.8
2,894,522	-		Sama_2407	0.34	+1.2
2,894,537	+		Sama_2407	0.35	+0.5
2,894,678	+		Sama_2407	0.48	+0.0
2,894,678	+		Sama_2407	0.48	+0.1
2,894,678	+		Sama_2407	0.48	-0.6
2,894,678	+		Sama_2407	0.48	-0.4
2,894,678	+		Sama_2407	0.48	-0.7
2,894,678	+		Sama_2407	0.48	-1.9
2,894,678	+		Sama_2407	0.48	-0.1
2,894,679	-		Sama_2407	0.49	+0.0
2,894,679	-		Sama_2407	0.49	-0.7
2,894,679	-		Sama_2407	0.49	+0.3
2,894,679	-		Sama_2407	0.49	+0.1
2,894,679	-		Sama_2407	0.49	-0.1
2,894,679	-		Sama_2407	0.49	+0.3
2,894,679	-		Sama_2407	0.49	-0.5
2,894,679	-		Sama_2407	0.49	+0.5
2,894,679	-		Sama_2407	0.49	-0.8
2,894,679	-		Sama_2407	0.49	+0.5
2,894,679	-		Sama_2407	0.49	+0.9
2,894,679	-		Sama_2407	0.49	-0.1
2,894,680	+		Sama_2407	0.49	-0.7
2,894,681	-		Sama_2407	0.49	+0.0
2,894,749	+		Sama_2407	0.55	-0.6
2,894,750	-		Sama_2407	0.55	-1.0
2,894,750	-		Sama_2407	0.55	-0.7
2,894,750	-		Sama_2407	0.55	+0.2
2,894,750	-		Sama_2407	0.55	+0.3
2,894,750	-		Sama_2407	0.55	-1.5
2,894,750	-		Sama_2407	0.55	+0.3
2,894,803	+		Sama_2407	0.60	-1.6
2,894,803	+		Sama_2407	0.60	-0.1
2,894,803	+		Sama_2407	0.60	-0.7
2,894,803	+		Sama_2407	0.60	+0.3
2,894,804	-		Sama_2407	0.61	+0.9
2,894,831	+		Sama_2407	0.63	-0.1
2,894,832	-		Sama_2407	0.63	-0.2
2,894,832	-		Sama_2407	0.63	+1.3
2,894,839	-		Sama_2407	0.64	-0.9
2,894,946	+		Sama_2407	0.74	-0.0
2,894,946	+		Sama_2407	0.74	+0.3
2,894,946	+		Sama_2407	0.74	+0.4
2,894,946	+		Sama_2407	0.74	-2.9
2,894,946	+		Sama_2407	0.74	+2.5
2,894,947	-		Sama_2407	0.74	-1.1
2,894,963	+		Sama_2407	0.76	-0.0
2,894,963	+		Sama_2407	0.76	+0.0
2,895,054	-		Sama_2407	0.84	+0.2
2,895,082	+		Sama_2407	0.87	-1.4
2,895,082	+		Sama_2407	0.87	-0.2
2,895,083	-		Sama_2407	0.87	-0.2
2,895,083	-		Sama_2407	0.87	+0.7
2,895,083	-		Sama_2407	0.87	+2.1
2,895,083	-		Sama_2407	0.87	-1.0
2,895,085	+		Sama_2407	0.87	+1.5
2,895,085	+		Sama_2407	0.87	-0.7
2,895,085	+		Sama_2407	0.87	-0.0
2,895,086	-		Sama_2407	0.88	-0.3
2,895,086	-		Sama_2407	0.88	+0.3
2,895,086	-		Sama_2407	0.88	-0.9
2,895,086	-		Sama_2407	0.88	-1.7
2,895,095	+		Sama_2407	0.88	+0.6
2,895,096	-		Sama_2407	0.89	-0.8
2,895,096	-		Sama_2407	0.89	+0.3
2,895,096	-		Sama_2407	0.89	+0.5