Strain Fitness in Shewanella amazonensis SB2B around Sama_2371

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
2,848,251	+		Sama_2370	0.47	+0.3
2,848,252	-		Sama_2370	0.47	-0.4
2,848,252	-		Sama_2370	0.47	+1.1
2,848,268	+		Sama_2370	0.48	+0.2
2,848,268	+		Sama_2370	0.48	+0.9
2,848,317	+		Sama_2370	0.51	+0.3
2,848,317	+		Sama_2370	0.51	-1.0
2,848,318	-		Sama_2370	0.51	+0.9
2,848,318	-		Sama_2370	0.51	-0.5
2,848,318	-		Sama_2370	0.51	-0.5
2,848,330	+		Sama_2370	0.52	+0.5
2,848,343	+		Sama_2370	0.52	+0.4
2,848,343	+		Sama_2370	0.52	+0.2
2,848,344	-		Sama_2370	0.52	+0.0
2,848,344	-		Sama_2370	0.52	+0.3
2,848,432	+		Sama_2370	0.58	+0.6
2,848,473	+		Sama_2370	0.60	+0.7
2,848,473	+		Sama_2370	0.60	+0.1
2,848,473	+		Sama_2370	0.60	+1.4
2,848,473	+		Sama_2370	0.60	-0.7
2,848,473	+		Sama_2370	0.60	+1.6
2,848,474	-		Sama_2370	0.60	-0.6
2,848,474	-		Sama_2370	0.60	+0.5
2,848,474	-		Sama_2370	0.60	+1.0
2,848,474	-		Sama_2370	0.60	+0.1
2,848,477	+		Sama_2370	0.60	+0.0
2,848,477	+		Sama_2370	0.60	+0.9
2,848,477	+		Sama_2370	0.60	-0.0
2,848,477	+		Sama_2370	0.60	+1.1
2,848,477	+		Sama_2370	0.60	-0.5
2,848,478	-		Sama_2370	0.60	-0.0
2,848,518	+		Sama_2370	0.63	-0.1
2,848,564	+		Sama_2370	0.65	-0.3
2,848,564	+		Sama_2370	0.65	-1.6
2,848,565	-		Sama_2370	0.65	+0.0
2,848,616	+		Sama_2370	0.68	+0.3
2,848,616	+		Sama_2370	0.68	-0.3
2,848,616	+		Sama_2370	0.68	+0.5
2,848,616	+		Sama_2370	0.68	+1.6
2,848,617	-		Sama_2370	0.68	+0.1
2,848,617	-		Sama_2370	0.68	-0.6
2,848,663	+		Sama_2370	0.71	-0.1
2,848,664	-		Sama_2370	0.71	+0.3
2,848,705	+		Sama_2370	0.73	+0.2
2,848,705	+		Sama_2370	0.73	+0.2
2,848,761	-		Sama_2370	0.77	-0.3
2,848,761	-		Sama_2370	0.77	-1.2
2,848,761	-		Sama_2370	0.77	-0.1
2,848,778	+		Sama_2370	0.78	-0.6
2,848,778	+		Sama_2370	0.78	-0.5
2,848,778	+		Sama_2370	0.78	+0.0
2,848,779	-		Sama_2370	0.78	+0.4
2,848,823	-		Sama_2370	0.80	+0.0
2,848,859	+		Sama_2370	0.82	-0.1
2,848,859	+		Sama_2370	0.82	-0.1
2,848,860	-		Sama_2370	0.82	-1.5
2,848,861	+		Sama_2370	0.83	-0.4
2,848,861	+		Sama_2370	0.83	-0.7
2,848,862	-		Sama_2370	0.83	-2.5
2,848,862	-		Sama_2370	0.83	-0.7
2,848,873	+		Sama_2370	0.83	-1.0
2,848,873	+		Sama_2370	0.83	-0.4
2,848,873	+		Sama_2370	0.83	-0.1
2,848,873	+		Sama_2370	0.83	+1.4
2,848,873	+		Sama_2370	0.83	+0.7
2,848,874	-		Sama_2370	0.83	-2.5
2,848,874	-		Sama_2370	0.83	-2.3
2,848,874	-		Sama_2370	0.83	-0.3
2,848,874	-		Sama_2370	0.83	-1.2
2,848,877	+		Sama_2370	0.83	-1.6
2,848,877	+		Sama_2370	0.83	+0.0
2,848,877	+		Sama_2370	0.83	+1.0
2,848,877	+		Sama_2370	0.83	-1.8
2,848,878	-		Sama_2370	0.84	-0.6
2,848,878	-		Sama_2370	0.84	+0.6
2,848,878	-		Sama_2370	0.84	+0.7
2,848,883	+		Sama_2370	0.84	+0.7
2,848,883	+		Sama_2370	0.84	-0.5
2,848,883	+		Sama_2370	0.84	+0.5
2,848,883	+		Sama_2370	0.84	+0.2
2,848,883	+		Sama_2370	0.84	+0.1
2,848,884	-		Sama_2370	0.84	-0.7
2,848,884	-		Sama_2370	0.84	+0.3
2,848,940	-		Sama_2370	0.87	-0.7
2,848,956	+		Sama_2370	0.88	+1.5
2,848,956	+		Sama_2370	0.88	-0.9
2,848,973	+		Sama_2370	0.89	+0.4
2,848,973	+		Sama_2370	0.89	-0.4
2,848,973	+		Sama_2370	0.89	+0.6
2,848,973	+		Sama_2370	0.89	+0.5
2,848,973	+		Sama_2370	0.89	-1.6
2,848,973	+		Sama_2370	0.89	+0.4
2,848,973	+		Sama_2370	0.89	+0.3
2,848,973	+		Sama_2370	0.89	+0.4
2,848,973	+		Sama_2370	0.89	+0.0
2,848,973	+		Sama_2370	0.89	+0.9
2,848,973	+		Sama_2370	0.89	+0.3
2,848,974	-		Sama_2370	0.89	+0.2
2,848,974	-		Sama_2370	0.89	-0.2
2,848,974	-		Sama_2370	0.89	-0.0
2,848,974	-		Sama_2370	0.89	-0.3
2,848,974	-		Sama_2370	0.89	-0.5
2,848,974	-		Sama_2370	0.89	-0.1
2,848,974	-		Sama_2370	0.89	-0.4
2,849,018	+				+1.3
2,849,018	+				+1.5
2,849,018	+				-1.2
2,849,018	+				+0.5
2,849,018	+				+0.3
2,849,019	-				+0.3
2,849,054	-				-0.0
2,849,064	+				+0.4
2,849,064	+				+0.9
2,849,064	+				-1.2
2,849,065	-				+0.4
2,849,141	+				-1.5
2,849,141	+				-1.0
2,849,298	+		Sama_2371	0.13	-1.5
2,849,298	+		Sama_2371	0.13	+0.7
2,849,299	-		Sama_2371	0.13	+0.8
2,849,299	-		Sama_2371	0.13	+0.7
2,849,393	+		Sama_2371	0.23	-0.7
2,849,404	+		Sama_2371	0.24	+0.0
2,849,404	+		Sama_2371	0.24	+1.4
2,849,404	+		Sama_2371	0.24	+1.5
2,849,404	+		Sama_2371	0.24	+1.2
2,849,405	-		Sama_2371	0.24	+2.7
2,849,405	-		Sama_2371	0.24	+0.7
2,849,456	-		Sama_2371	0.30	+0.0
2,849,492	+		Sama_2371	0.33	-0.1
2,849,492	+		Sama_2371	0.33	+0.7
2,849,492	+		Sama_2371	0.33	+0.5
2,849,493	-		Sama_2371	0.33	-1.1
2,849,574	+		Sama_2371	0.42	+2.9
2,849,575	-		Sama_2371	0.42	+0.2
2,849,575	-		Sama_2371	0.42	-1.7
2,849,575	-		Sama_2371	0.42	-0.1
2,849,575	-		Sama_2371	0.42	+0.5
2,849,577	+		Sama_2371	0.42	+1.1
2,849,577	+		Sama_2371	0.42	-0.1
2,849,577	+		Sama_2371	0.42	+0.7
2,849,620	+		Sama_2371	0.47	-0.9
2,849,621	-		Sama_2371	0.47	+0.3
2,849,621	-		Sama_2371	0.47	-0.9
2,849,621	-		Sama_2371	0.47	-1.7
2,849,651	+		Sama_2371	0.50	-0.6
2,849,651	+		Sama_2371	0.50	-0.0
2,849,652	-		Sama_2371	0.50	-0.4
2,849,652	-		Sama_2371	0.50	+0.4
2,849,652	-		Sama_2371	0.50	+0.6
2,849,655	+		Sama_2371	0.50	+0.9
2,849,656	-		Sama_2371	0.50	+1.6
2,849,656	-		Sama_2371	0.50	+0.4
2,849,656	-		Sama_2371	0.50	-0.5
2,849,656	-		Sama_2371	0.50	+0.2
2,849,656	-		Sama_2371	0.50	-0.7
2,849,731	+		Sama_2371	0.58	+0.7
2,849,732	-		Sama_2371	0.58	+1.4
2,849,734	+		Sama_2371	0.58	+1.0
2,849,735	-		Sama_2371	0.59	+1.4
2,849,821	+		Sama_2371	0.67	+1.2
2,849,821	+		Sama_2371	0.67	+0.9
2,849,822	-		Sama_2371	0.68	+2.4
2,849,822	-		Sama_2371	0.68	+0.9
2,849,846	+		Sama_2371	0.70	+1.0
2,849,846	+		Sama_2371	0.70	+3.3
2,849,846	+		Sama_2371	0.70	+2.3
2,849,846	+		Sama_2371	0.70	+0.7
2,849,847	-		Sama_2371	0.70	-0.7
2,849,847	-		Sama_2371	0.70	+1.9
2,849,848	+		Sama_2371	0.70	+2.6
2,849,848	+		Sama_2371	0.70	+0.5
2,849,848	+		Sama_2371	0.70	+2.0
2,849,848	+		Sama_2371	0.70	+2.1
2,849,849	-		Sama_2371	0.70	+1.4
2,849,849	-		Sama_2371	0.70	+2.4
2,849,849	-		Sama_2371	0.70	+1.1
2,849,849	-		Sama_2371	0.70	+1.1
2,849,888	+		Sama_2371	0.74	+1.7
2,849,888	+		Sama_2371	0.74	+0.7
2,849,888	+		Sama_2371	0.74	+1.9
2,849,888	+		Sama_2371	0.74	+1.4
2,849,888	+		Sama_2371	0.74	+0.7
2,849,888	+		Sama_2371	0.74	+0.5
2,849,888	+		Sama_2371	0.74	+1.6
2,849,888	+		Sama_2371	0.74	+1.0
2,849,888	+		Sama_2371	0.74	+0.9
2,849,888	+		Sama_2371	0.74	+2.4
2,849,888	+		Sama_2371	0.74	+1.6
2,849,888	+		Sama_2371	0.74	-1.4
2,849,888	+		Sama_2371	0.74	+1.2
2,849,888	+		Sama_2371	0.74	+1.3
2,849,888	+		Sama_2371	0.74	+0.9
2,849,888	+		Sama_2371	0.74	+0.1
2,849,888	+		Sama_2371	0.74	+1.6
2,849,889	-		Sama_2371	0.75	+1.2
2,849,889	-		Sama_2371	0.75	+2.9
2,849,889	-		Sama_2371	0.75	+0.7
2,849,889	-		Sama_2371	0.75	+1.3
2,849,889	-		Sama_2371	0.75	+1.0
2,849,889	-		Sama_2371	0.75	-1.7
2,849,889	-		Sama_2371	0.75	+1.0
2,849,889	-		Sama_2371	0.75	+0.7
2,849,889	-		Sama_2371	0.75	+0.9
2,849,889	-		Sama_2371	0.75	+1.4
2,849,889	-		Sama_2371	0.75	+0.9
2,849,889	-		Sama_2371	0.75	+1.8
2,849,889	-		Sama_2371	0.75	+0.4
2,849,889	-		Sama_2371	0.75	+1.1
2,849,892	+		Sama_2371	0.75	+1.6
2,849,892	+		Sama_2371	0.75	+0.7
2,849,893	-		Sama_2371	0.75	+0.9
2,849,893	-		Sama_2371	0.75	+0.6
2,849,893	-		Sama_2371	0.75	+1.1
2,849,893	-		Sama_2371	0.75	+0.4
2,849,893	-		Sama_2371	0.75	+1.9
2,849,893	-		Sama_2371	0.75	+1.1
2,849,893	-		Sama_2371	0.75	+1.4
2,849,926	+		Sama_2371	0.78	+1.6
2,849,936	+		Sama_2371	0.79	+0.4
2,849,937	-		Sama_2371	0.80	+2.1
2,849,937	-		Sama_2371	0.80	+2.3
2,849,937	-		Sama_2371	0.80	+0.0
2,850,045	+				+1.2
2,850,046	-				+0.0
2,850,069	-				+0.5
2,850,084	-				+2.3
2,850,084	-				+1.0
2,850,084	-				+0.8
2,850,084	-				+0.9
2,850,126	-				+0.5
2,850,126	-				+1.0
2,850,126	-				+1.2
2,850,165	+				+0.9
2,850,165	+				+1.3
2,850,165	+				-0.4
2,850,166	-				-1.1
2,850,166	-				-0.5
2,850,166	-				-0.1
2,850,166	-				+0.7
2,850,170	+				-0.3
2,850,170	+				-0.7
2,850,171	-				-0.1
2,850,171	-				+1.0
2,850,210	-				-0.4
2,850,283	+		Sama_2372	0.20	-1.1
2,850,284	-		Sama_2372	0.20	-1.5
2,850,287	+		Sama_2372	0.21	-0.5
2,850,288	-		Sama_2372	0.21	+0.9
2,850,288	-		Sama_2372	0.21	-0.1
2,850,288	-		Sama_2372	0.21	+0.9
2,850,336	-		Sama_2372	0.38	-0.4
2,850,336	-		Sama_2372	0.38	+0.3
2,850,336	-		Sama_2372	0.38	+0.6
2,850,349	+		Sama_2372	0.42	+0.2
2,850,350	-		Sama_2372	0.43	-0.6
2,850,411	+		Sama_2372	0.63	-0.3
2,850,452	+		Sama_2372	0.77	-0.3
2,850,452	+		Sama_2372	0.77	-0.7
2,850,453	-		Sama_2372	0.78	-2.6
2,850,455	+		Sama_2372	0.78	-0.2
2,850,455	+		Sama_2372	0.78	-0.5
2,850,455	+		Sama_2372	0.78	-0.1
2,850,456	-		Sama_2372	0.79	-0.0
2,850,555	-				-0.1
2,850,561	+				-2.0
2,850,575	-				-1.1
2,850,579	+				+1.6
2,850,579	+				+0.4
2,850,580	-				+0.9
2,850,580	-				+0.3
2,850,580	-				-0.4
2,850,635	-				+0.4
2,850,664	+				-0.7
2,850,664	+				-0.4
2,850,665	-				-1.1
2,850,694	-				-0.3
2,850,768	-				+0.9
2,850,777	+				-0.7
2,850,777	+				-2.5
2,850,777	+				-0.1
2,850,777	+				-0.7
2,850,777	+				-0.1
2,850,778	-				-0.6
2,850,778	-				-0.4
2,850,778	-				+0.3
2,850,779	+				-1.5
2,850,779	+				-2.3
2,850,779	+				-0.3
2,850,779	+				+0.6
2,850,779	+				-1.6
2,850,780	-				+0.6
2,850,780	-				-0.1
2,850,780	-				+0.2
2,850,780	-				-0.1
2,850,780	-				+0.3
2,850,780	-				+0.2
2,850,793	+				-0.5
2,850,805	-				+0.7
2,850,810	-				-1.0
2,850,810	-				+0.0
2,850,821	+				-0.3
2,850,838	+				-1.5
2,850,839	-				-0.1
2,850,839	-				+0.9
2,850,861	+				-0.1
2,850,862	-				+0.3
2,850,862	-				-0.0
2,850,862	-				-0.5
2,850,881	+				+0.9
2,850,937	+				+1.4
2,850,950	+				-0.5
2,851,002	-		Sama_2373	0.17	-0.7
2,851,034	+		Sama_2373	0.21	-2.0
2,851,035	-		Sama_2373	0.21	-0.7
2,851,035	-		Sama_2373	0.21	-0.3
2,851,071	+		Sama_2373	0.26	+1.9
2,851,072	-		Sama_2373	0.26	-1.6
2,851,072	-		Sama_2373	0.26	-0.5
2,851,120	-		Sama_2373	0.33	-0.3
2,851,120	-		Sama_2373	0.33	-0.9