Strain Fitness in Shewanella amazonensis SB2B around Sama_2119

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
2,562,185	+		Sama_2118	0.31	-0.2
2,562,185	+		Sama_2118	0.31	-0.9
2,562,186	-		Sama_2118	0.31	-0.5
2,562,186	-		Sama_2118	0.31	-0.8
2,562,186	-		Sama_2118	0.31	+0.4
2,562,195	+		Sama_2118	0.32	+1.4
2,562,196	-		Sama_2118	0.32	-1.2
2,562,205	+		Sama_2118	0.33	+0.4
2,562,205	+		Sama_2118	0.33	-1.2
2,562,205	+		Sama_2118	0.33	+1.1
2,562,205	+		Sama_2118	0.33	-0.8
2,562,206	-		Sama_2118	0.33	-0.6
2,562,206	-		Sama_2118	0.33	+0.8
2,562,206	-		Sama_2118	0.33	+1.2
2,562,209	+		Sama_2118	0.34	+0.0
2,562,209	+		Sama_2118	0.34	-0.4
2,562,209	+		Sama_2118	0.34	+0.4
2,562,209	+		Sama_2118	0.34	-0.2
2,562,210	-		Sama_2118	0.34	+0.0
2,562,210	-		Sama_2118	0.34	-0.4
2,562,210	-		Sama_2118	0.34	-1.8
2,562,210	-		Sama_2118	0.34	+0.2
2,562,210	-		Sama_2118	0.34	-1.2
2,562,211	+		Sama_2118	0.34	-1.0
2,562,211	+		Sama_2118	0.34	-1.6
2,562,211	+		Sama_2118	0.34	+0.1
2,562,211	+		Sama_2118	0.34	-0.4
2,562,211	+		Sama_2118	0.34	-0.1
2,562,211	+		Sama_2118	0.34	+1.8
2,562,211	+		Sama_2118	0.34	+0.3
2,562,211	+		Sama_2118	0.34	-1.0
2,562,212	-		Sama_2118	0.34	+0.4
2,562,212	-		Sama_2118	0.34	-0.5
2,562,212	-		Sama_2118	0.34	+0.5
2,562,212	-		Sama_2118	0.34	+0.1
2,562,212	-		Sama_2118	0.34	-0.2
2,562,262	+		Sama_2118	0.39	+1.1
2,562,263	-		Sama_2118	0.39	+1.3
2,562,332	+		Sama_2118	0.45	+0.4
2,562,354	-		Sama_2118	0.47	+0.0
2,562,433	-		Sama_2118	0.54	+0.2
2,562,452	+		Sama_2118	0.56	+1.2
2,562,452	+		Sama_2118	0.56	+0.8
2,562,453	-		Sama_2118	0.56	-0.8
2,562,497	+		Sama_2118	0.60	+0.6
2,562,589	+		Sama_2118	0.69	+0.6
2,562,590	-		Sama_2118	0.69	+0.1
2,562,603	+		Sama_2118	0.70	+1.4
2,562,677	+		Sama_2118	0.77	-1.4
2,562,677	+		Sama_2118	0.77	+1.1
2,562,677	+		Sama_2118	0.77	-0.4
2,562,678	-		Sama_2118	0.77	-0.8
2,562,681	+		Sama_2118	0.77	-1.0
2,562,681	+		Sama_2118	0.77	+1.5
2,562,681	+		Sama_2118	0.77	-2.6
2,562,682	-		Sama_2118	0.78	-0.1
2,562,682	-		Sama_2118	0.78	+0.2
2,562,682	-		Sama_2118	0.78	-0.5
2,562,902	-				-0.2
2,562,917	+				+0.5
2,562,917	+				-0.5
2,562,918	-				+1.2
2,562,918	-				+1.3
2,562,918	-				+0.4
2,562,918	-				-0.5
2,562,918	-				-0.8
2,562,934	+				-0.8
2,562,934	+				-0.9
2,562,934	+				-1.2
2,562,934	+				-1.2
2,562,935	-				+1.1
2,562,956	+				+0.1
2,562,956	+				-0.5
2,562,957	-				-1.8
2,562,957	-				-1.2
2,562,957	-				+3.0
2,562,958	+				+0.0
2,562,959	-				+0.8
2,562,965	+				+0.8
2,562,966	-				+1.2
2,562,966	-				-0.8
2,562,966	-				-0.2
2,563,058	+				+0.8
2,563,058	+				+0.8
2,563,060	+				-0.2
2,563,061	-				-0.5
2,563,062	+				+1.1
2,563,062	+				+1.1
2,563,062	+				-0.0
2,563,062	+				+1.2
2,563,062	+				-1.3
2,563,062	+				+1.5
2,563,063	-				+0.5
2,563,063	-				-0.1
2,563,194	-		Sama_2119	0.11	+0.6
2,563,334	-		Sama_2119	0.25	+1.8
2,563,334	-		Sama_2119	0.25	+1.1
2,563,353	-		Sama_2119	0.27	+1.4
2,563,440	-		Sama_2119	0.36	+0.9
2,563,466	-		Sama_2119	0.38	-0.5
2,563,555	+		Sama_2119	0.47	-0.4
2,563,556	-		Sama_2119	0.47	-0.6
2,563,586	-		Sama_2119	0.50	+0.2
2,563,586	-		Sama_2119	0.50	+0.4
2,563,586	-		Sama_2119	0.50	+0.0
2,563,683	+		Sama_2119	0.59	+0.5
2,563,684	-		Sama_2119	0.60	+0.5
2,563,684	-		Sama_2119	0.60	+0.6
2,563,684	-		Sama_2119	0.60	-0.2
2,563,684	-		Sama_2119	0.60	+0.9
2,563,684	-		Sama_2119	0.60	+1.3
2,563,684	-		Sama_2119	0.60	-0.5
2,563,684	-		Sama_2119	0.60	+0.2
2,563,684	-		Sama_2119	0.60	+1.5
2,563,767	+		Sama_2119	0.68	+0.3
2,563,777	-		Sama_2119	0.69	+0.3
2,563,777	-		Sama_2119	0.69	+1.5
2,563,777	-		Sama_2119	0.69	+1.2
2,563,836	-		Sama_2119	0.75	+2.2
2,563,836	-		Sama_2119	0.75	+0.4
2,563,902	-		Sama_2119	0.81	+0.5
2,563,919	+		Sama_2119	0.83	+0.7
2,563,932	+		Sama_2119	0.84	+0.1
2,563,932	+		Sama_2119	0.84	+0.3
2,563,980	-		Sama_2119	0.89	+1.1
2,563,989	-		Sama_2119	0.90	+0.5
2,564,075	-				+1.1
2,564,075	-				-1.4
2,564,142	+				+0.8
2,564,143	-				-2.5
2,564,154	+				-0.1
2,564,154	+				+0.3
2,564,159	+				-0.5
2,564,174	+				+1.1
2,564,208	+				+0.8
2,564,220	-				+3.3
2,564,220	-				-0.7
2,564,220	-				-1.1
2,564,220	-				-2.5
2,564,220	-				+0.3
2,564,223	+				+0.2
2,564,224	-				+0.1
2,564,243	-				+0.5
2,564,243	-				+0.7
2,564,309	+				+1.2
2,564,309	+				+1.0
2,564,310	-				-0.2
2,564,310	-				-0.2
2,564,310	-				+1.0
2,564,384	-				+0.8
2,564,404	+				+1.2
2,564,404	+				-1.2
2,564,404	+				+0.1
2,564,405	-				+0.1
2,564,516	+		Sama_2120	0.12	-1.9
2,564,671	-		Sama_2120	0.18	+0.1
2,564,681	+		Sama_2120	0.18	+0.4
2,564,681	+		Sama_2120	0.18	-1.2
2,564,682	-		Sama_2120	0.18	+0.7
2,564,682	-		Sama_2120	0.18	-0.0
2,564,715	+		Sama_2120	0.20	-0.4
2,564,716	-		Sama_2120	0.20	+1.5
2,564,762	-		Sama_2120	0.22	+0.4
2,564,774	-		Sama_2120	0.22	+0.3
2,564,776	+		Sama_2120	0.22	+0.1
2,564,777	-		Sama_2120	0.22	-0.2
2,564,884	+		Sama_2120	0.26	+0.3
2,564,884	+		Sama_2120	0.26	-1.0
2,564,884	+		Sama_2120	0.26	+1.2
2,564,885	-		Sama_2120	0.26	-0.8
2,564,920	-		Sama_2120	0.28	-0.0
2,564,939	+		Sama_2120	0.29	+1.8
2,564,939	+		Sama_2120	0.29	-0.8
2,564,939	+		Sama_2120	0.29	+3.1
2,564,940	-		Sama_2120	0.29	-0.6
2,564,940	-		Sama_2120	0.29	-0.6
2,564,940	-		Sama_2120	0.29	-1.9
2,564,990	+		Sama_2120	0.31	-0.8
2,565,018	+		Sama_2120	0.32	-2.4
2,565,034	+		Sama_2120	0.32	+2.8
2,565,034	+		Sama_2120	0.32	-0.2
2,565,035	-		Sama_2120	0.33	+0.8
2,565,035	-		Sama_2120	0.33	-0.3
2,565,035	-		Sama_2120	0.33	-1.1