Strain Fitness in Shewanella amazonensis SB2B around Sama_1399

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
1,694,669	+				+0.5
1,694,670	-				-0.5
1,694,670	-				+1.4
1,694,680	-				-0.8
1,694,680	-				-0.1
1,694,708	+				-0.5
1,694,709	-				-1.8
1,694,853	-		Sama_1398	0.27	-0.1
1,694,853	-		Sama_1398	0.27	+1.0
1,694,884	+		Sama_1398	0.31	-0.5
1,694,884	+		Sama_1398	0.31	+2.6
1,695,131	+		Sama_1398	0.62	+0.3
1,695,132	-		Sama_1398	0.62	+0.4
1,695,132	-		Sama_1398	0.62	+0.4
1,695,197	+		Sama_1398	0.70	+0.2
1,695,197	+		Sama_1398	0.70	-2.8
1,695,217	+		Sama_1398	0.73	+0.6
1,695,218	-		Sama_1398	0.73	-1.7
1,695,218	-		Sama_1398	0.73	+0.2
1,695,260	+		Sama_1398	0.78	-0.2
1,695,260	+		Sama_1398	0.78	-0.0
1,695,260	+		Sama_1398	0.78	+1.3
1,695,260	+		Sama_1398	0.78	-1.5
1,695,260	+		Sama_1398	0.78	+0.8
1,695,260	+		Sama_1398	0.78	-0.5
1,695,261	-		Sama_1398	0.78	+0.4
1,695,261	-		Sama_1398	0.78	-1.0
1,695,261	-		Sama_1398	0.78	+0.3
1,695,261	-		Sama_1398	0.78	+1.7
1,695,261	-		Sama_1398	0.78	+1.0
1,695,261	-		Sama_1398	0.78	+0.7
1,695,306	+		Sama_1398	0.84	+0.2
1,695,307	-		Sama_1398	0.84	-1.1
1,695,307	-		Sama_1398	0.84	-1.2
1,695,314	+		Sama_1398	0.85	-0.4
1,695,314	+		Sama_1398	0.85	-0.1
1,695,314	+		Sama_1398	0.85	+0.3
1,695,314	+		Sama_1398	0.85	-0.1
1,695,315	-		Sama_1398	0.85	-1.9
1,695,315	-		Sama_1398	0.85	-0.1
1,695,315	-		Sama_1398	0.85	-0.7
1,695,315	-		Sama_1398	0.85	-0.7
1,695,315	-		Sama_1398	0.85	-0.2
1,695,318	+		Sama_1398	0.85	-0.7
1,695,318	+		Sama_1398	0.85	+1.4
1,695,318	+		Sama_1398	0.85	-1.2
1,695,318	+		Sama_1398	0.85	-0.8
1,695,319	-		Sama_1398	0.85	+0.0
1,695,319	-		Sama_1398	0.85	-0.6
1,695,319	-		Sama_1398	0.85	-0.5
1,695,319	-		Sama_1398	0.85	-1.5
1,695,443	-				+0.6
1,695,626	+				-1.8
1,695,626	+				+0.5
1,695,626	+				-3.3
1,695,626	+				+1.4
1,695,626	+				-0.1
1,695,626	+				+1.1
1,695,626	+				+1.0
1,695,626	+				-0.5
1,695,626	+				+0.3
1,695,627	-				+0.5
1,695,627	-				-0.5
1,695,627	-				+0.7
1,695,630	+				+2.4
1,695,667	+				+0.4
1,695,716	+				-0.1
1,695,756	+				+1.8
1,695,756	+				-1.5
1,695,757	-				-0.3
1,695,757	-				+0.8
1,695,771	+				-1.5
1,695,771	+				-1.1
1,695,772	-				+0.8
1,695,794	+				-0.8
1,695,794	+				-1.5
1,695,795	-				-0.7
1,695,795	-				-1.2
1,695,899	+				-1.8
1,695,900	-				-0.2
1,695,900	-				-0.5
1,695,937	+		Sama_1399	0.10	+0.6
1,695,938	-		Sama_1399	0.10	+0.4
1,695,997	+		Sama_1399	0.12	+0.2
1,695,997	+		Sama_1399	0.12	+2.0
1,695,998	-		Sama_1399	0.12	-0.9
1,695,998	-		Sama_1399	0.12	-1.4
1,695,998	-		Sama_1399	0.12	+0.1
1,695,998	-		Sama_1399	0.12	-1.1
1,695,998	-		Sama_1399	0.12	+1.2
1,695,998	-		Sama_1399	0.12	-0.1
1,696,005	-		Sama_1399	0.12	+0.0
1,696,005	-		Sama_1399	0.12	+0.4
1,696,031	+		Sama_1399	0.13	+0.1
1,696,031	+		Sama_1399	0.13	+0.4
1,696,031	+		Sama_1399	0.13	+0.8
1,696,031	+		Sama_1399	0.13	+0.4
1,696,031	+		Sama_1399	0.13	-0.1
1,696,032	-		Sama_1399	0.13	-0.5
1,696,032	-		Sama_1399	0.13	+0.6
1,696,032	-		Sama_1399	0.13	-0.2
1,696,131	+		Sama_1399	0.17	+0.2
1,696,132	-		Sama_1399	0.17	-1.0
1,696,132	-		Sama_1399	0.17	-0.2
1,696,132	-		Sama_1399	0.17	+0.6
1,696,169	-		Sama_1399	0.18	-0.5
1,696,289	+		Sama_1399	0.22	+0.9
1,696,289	+		Sama_1399	0.22	-1.8
1,696,289	+		Sama_1399	0.22	-0.4
1,696,290	-		Sama_1399	0.22	-0.5
1,696,290	-		Sama_1399	0.22	+1.8
1,696,310	+		Sama_1399	0.23	+0.2
1,696,311	-		Sama_1399	0.23	-0.6
1,696,311	-		Sama_1399	0.23	-0.1
1,696,329	+		Sama_1399	0.24	-0.1
1,696,329	+		Sama_1399	0.24	+0.4
1,696,364	+		Sama_1399	0.25	-1.2
1,696,364	+		Sama_1399	0.25	+0.8
1,696,375	+		Sama_1399	0.25	+0.4
1,696,375	+		Sama_1399	0.25	-1.2
1,696,375	+		Sama_1399	0.25	-0.2
1,696,375	+		Sama_1399	0.25	+0.4
1,696,376	-		Sama_1399	0.25	-0.8
1,696,376	-		Sama_1399	0.25	-0.2
1,696,379	+		Sama_1399	0.25	-0.5
1,696,379	+		Sama_1399	0.25	+0.6
1,696,379	+		Sama_1399	0.25	-0.2
1,696,379	+		Sama_1399	0.25	+0.2
1,696,380	-		Sama_1399	0.25	-0.8
1,696,380	-		Sama_1399	0.25	-0.8
1,696,380	-		Sama_1399	0.25	-0.6
1,696,380	-		Sama_1399	0.25	-1.8
1,696,380	-		Sama_1399	0.25	-1.2
1,696,395	-		Sama_1399	0.26	+0.0
1,696,395	-		Sama_1399	0.26	+0.2
1,696,395	-		Sama_1399	0.26	+0.0
1,696,395	-		Sama_1399	0.26	+0.8
1,696,397	+		Sama_1399	0.26	-0.3
1,696,398	-		Sama_1399	0.26	+0.8
1,696,398	-		Sama_1399	0.26	-0.4
1,696,398	-		Sama_1399	0.26	+0.5
1,696,400	+		Sama_1399	0.26	-0.0
1,696,400	+		Sama_1399	0.26	-0.2
1,696,400	+		Sama_1399	0.26	-0.8
1,696,401	-		Sama_1399	0.26	+1.3
1,696,477	+		Sama_1399	0.29	+0.5
1,696,478	-		Sama_1399	0.29	-0.2
1,696,478	-		Sama_1399	0.29	-0.5
1,696,482	+		Sama_1399	0.29	-1.8
1,696,483	-		Sama_1399	0.29	+1.8
1,696,488	+		Sama_1399	0.29	+1.0
1,696,489	-		Sama_1399	0.29	-0.4
1,696,489	-		Sama_1399	0.29	+0.0
1,696,592	-		Sama_1399	0.33	+0.1
1,696,619	+		Sama_1399	0.34	-1.1
1,696,619	+		Sama_1399	0.34	+0.2
1,696,619	+		Sama_1399	0.34	+0.5
1,696,619	+		Sama_1399	0.34	-0.1
1,696,619	+		Sama_1399	0.34	+1.6
1,696,764	+		Sama_1399	0.38	+0.5
1,696,776	+		Sama_1399	0.39	-1.7
1,696,776	+		Sama_1399	0.39	+0.2
1,696,776	+		Sama_1399	0.39	+0.3
1,696,777	-		Sama_1399	0.39	+0.0
1,696,801	+		Sama_1399	0.40	+0.7
1,696,802	-		Sama_1399	0.40	-1.6
1,696,811	+		Sama_1399	0.40	+0.8
1,696,812	-		Sama_1399	0.40	+0.1
1,696,833	+		Sama_1399	0.41	-1.3
1,696,868	+		Sama_1399	0.42	-2.4
1,696,868	+		Sama_1399	0.42	+0.0
1,696,868	+		Sama_1399	0.42	-0.7
1,696,868	+		Sama_1399	0.42	-0.8
1,696,868	+		Sama_1399	0.42	-0.2
1,696,869	-		Sama_1399	0.42	+0.8
1,696,869	-		Sama_1399	0.42	+0.9
1,696,869	-		Sama_1399	0.42	-1.1
1,696,869	-		Sama_1399	0.42	-0.3
1,696,880	+		Sama_1399	0.42	+0.8
1,696,881	-		Sama_1399	0.43	-0.5
1,696,919	+		Sama_1399	0.44	+0.8
1,696,920	-		Sama_1399	0.44	+1.4
1,696,920	-		Sama_1399	0.44	+1.3
1,696,920	-		Sama_1399	0.44	+1.4
1,696,925	+		Sama_1399	0.44	-1.5
1,696,925	+		Sama_1399	0.44	-0.4
1,696,926	-		Sama_1399	0.44	+0.4
1,696,926	-		Sama_1399	0.44	+1.1
1,696,928	+		Sama_1399	0.44	-1.1
1,696,928	+		Sama_1399	0.44	-0.2
1,696,928	+		Sama_1399	0.44	+0.5
1,696,928	+		Sama_1399	0.44	+0.8
1,696,929	-		Sama_1399	0.44	-0.2
1,696,997	+		Sama_1399	0.47	+0.8
1,696,997	+		Sama_1399	0.47	+0.1
1,696,998	-		Sama_1399	0.47	+3.1
1,696,998	-		Sama_1399	0.47	+0.5
1,696,998	-		Sama_1399	0.47	+0.8
1,697,060	+		Sama_1399	0.49	+0.1
1,697,060	+		Sama_1399	0.49	-2.4
1,697,061	-		Sama_1399	0.49	-0.4
1,697,170	+		Sama_1399	0.52	+0.5
1,697,170	+		Sama_1399	0.52	-0.1
1,697,171	-		Sama_1399	0.53	+2.4
1,697,171	-		Sama_1399	0.53	+0.5
1,697,219	+		Sama_1399	0.54	-1.5
1,697,219	+		Sama_1399	0.54	-0.1
1,697,220	-		Sama_1399	0.54	+1.5
1,697,220	-		Sama_1399	0.54	+0.5
1,697,220	-		Sama_1399	0.54	+0.1
1,697,220	-		Sama_1399	0.54	-0.4
1,697,267	+		Sama_1399	0.56	-0.6
1,697,267	+		Sama_1399	0.56	+0.4
1,697,267	+		Sama_1399	0.56	+0.4
1,697,267	+		Sama_1399	0.56	+0.5
1,697,267	+		Sama_1399	0.56	+0.2
1,697,268	-		Sama_1399	0.56	+0.8
1,697,268	-		Sama_1399	0.56	+0.5
1,697,268	-		Sama_1399	0.56	-0.5
1,697,309	+		Sama_1399	0.57	-1.0
1,697,310	-		Sama_1399	0.57	-0.9
1,697,364	-		Sama_1399	0.59	+1.5
1,697,507	+		Sama_1399	0.64	+1.4
1,697,508	-		Sama_1399	0.64	-0.3
1,697,518	+		Sama_1399	0.64	+0.5
1,697,519	-		Sama_1399	0.64	-1.1
1,697,531	+		Sama_1399	0.65	+0.4
1,697,531	+		Sama_1399	0.65	+0.3
1,697,532	-		Sama_1399	0.65	-2.0
1,697,532	-		Sama_1399	0.65	+0.8
1,697,556	+		Sama_1399	0.66	-0.4
1,697,556	+		Sama_1399	0.66	-0.8
1,697,557	-		Sama_1399	0.66	-1.1
1,697,557	-		Sama_1399	0.66	-0.8
1,697,564	+		Sama_1399	0.66	-2.4
1,697,564	+		Sama_1399	0.66	-1.1
1,697,564	+		Sama_1399	0.66	-0.4
1,697,565	-		Sama_1399	0.66	-1.3
1,697,565	-		Sama_1399	0.66	-0.3
1,697,636	+		Sama_1399	0.69	+0.2
1,697,636	+		Sama_1399	0.69	-0.9
1,697,636	+		Sama_1399	0.69	+1.5
1,697,637	-		Sama_1399	0.69	+0.8
1,697,642	+		Sama_1399	0.69	+0.4
1,697,642	+		Sama_1399	0.69	+0.1
1,697,642	+		Sama_1399	0.69	+0.4
1,697,643	-		Sama_1399	0.69	+0.6
1,697,678	+		Sama_1399	0.70	-0.2
1,697,679	-		Sama_1399	0.70	+0.3
1,697,679	-		Sama_1399	0.70	-1.2
1,697,703	+		Sama_1399	0.71	+0.5
1,697,703	+		Sama_1399	0.71	-1.2
1,697,742	+		Sama_1399	0.72	+0.5
1,697,750	+		Sama_1399	0.72	-0.5
1,697,750	+		Sama_1399	0.72	-1.2
1,697,750	+		Sama_1399	0.72	-0.5
1,697,750	+		Sama_1399	0.72	+0.9
1,697,750	+		Sama_1399	0.72	+0.8
1,697,751	-		Sama_1399	0.72	-1.4
1,697,751	-		Sama_1399	0.72	+0.1
1,697,786	-		Sama_1399	0.74	+0.3
1,697,887	+		Sama_1399	0.77	+0.4
1,697,931	+		Sama_1399	0.79	-0.2
1,698,045	+		Sama_1399	0.83	-0.7
1,698,054	+		Sama_1399	0.83	+0.5
1,698,054	+		Sama_1399	0.83	-0.4
1,698,054	+		Sama_1399	0.83	-0.8
1,698,054	+		Sama_1399	0.83	-0.7
1,698,055	-		Sama_1399	0.83	+0.6
1,698,055	-		Sama_1399	0.83	-2.2
1,698,055	-		Sama_1399	0.83	-1.2
1,698,061	+		Sama_1399	0.83	+0.8
1,698,061	+		Sama_1399	0.83	+0.4
1,698,062	-		Sama_1399	0.83	+0.1
1,698,064	-		Sama_1399	0.83	-1.1
1,698,078	+		Sama_1399	0.84	-0.8
1,698,156	+		Sama_1399	0.86	-0.3
1,698,241	+		Sama_1399	0.89	+0.2
1,698,312	+				+1.1
1,698,313	-				-1.2
1,698,313	-				-0.1
1,698,356	-				-0.7
1,698,356	-				+0.4
1,698,358	+				-0.2
1,698,359	-				-0.8
1,698,538	+				+1.4
1,698,566	-				-1.5
1,698,598	+				-1.5
1,698,598	+				+1.4
1,698,599	-				-1.0
1,698,599	-				-1.2
1,698,599	-				-0.2
1,698,613	+				-0.5
1,698,625	+				+1.3
1,698,626	-				-0.8
1,698,626	-				+0.2
1,698,626	-				-0.3
1,698,626	-				+2.0
1,698,626	-				+0.6
1,698,626	-				+0.8
1,698,660	+				+0.4
1,698,660	+				+0.2
1,698,687	-				+1.8
1,698,841	+				-1.2
1,698,907	-				-0.2
1,698,907	-				-1.5
1,698,907	-				-1.2
1,698,962	-		Sama_1400	0.13	-4.0
1,698,988	+		Sama_1400	0.16	-2.0
1,698,989	-		Sama_1400	0.16	-1.5
1,698,989	-		Sama_1400	0.16	-1.5
1,698,989	-		Sama_1400	0.16	-1.0
1,698,989	-		Sama_1400	0.16	-1.8
1,698,989	-		Sama_1400	0.16	-1.5
1,698,990	+		Sama_1400	0.16	-2.0
1,698,990	+		Sama_1400	0.16	-2.8
1,698,990	+		Sama_1400	0.16	-2.9
1,698,991	-		Sama_1400	0.16	-2.2
1,698,991	-		Sama_1400	0.16	-2.7
1,698,991	-		Sama_1400	0.16	-3.1
1,699,006	+		Sama_1400	0.18	-0.4
1,699,007	-		Sama_1400	0.18	-1.8
1,699,071	-		Sama_1400	0.24	-3.7
1,699,156	-		Sama_1400	0.33	-3.6
1,699,156	-		Sama_1400	0.33	-1.2
1,699,185	+		Sama_1400	0.36	-2.4
1,699,185	+		Sama_1400	0.36	-2.4
1,699,185	+		Sama_1400	0.36	-2.9
1,699,186	-		Sama_1400	0.36	-1.8
1,699,186	-		Sama_1400	0.36	-1.7
1,699,268	-		Sama_1400	0.44	-2.2
1,699,268	-		Sama_1400	0.44	-2.4
1,699,285	+		Sama_1400	0.46	-3.4
1,699,286	-		Sama_1400	0.46	-0.8
1,699,286	-		Sama_1400	0.46	-0.8
1,699,287	+		Sama_1400	0.46	-1.4
1,699,287	+		Sama_1400	0.46	-0.2
1,699,287	+		Sama_1400	0.46	-0.8
1,699,287	+		Sama_1400	0.46	-1.5
1,699,287	+		Sama_1400	0.46	-3.1
1,699,287	+		Sama_1400	0.46	-2.9
1,699,287	+		Sama_1400	0.46	-2.9
1,699,287	+		Sama_1400	0.46	-1.2
1,699,287	+		Sama_1400	0.46	-2.3
1,699,287	+		Sama_1400	0.46	-2.2
1,699,287	+		Sama_1400	0.46	-2.0
1,699,287	+		Sama_1400	0.46	-1.5
1,699,288	-		Sama_1400	0.46	-2.5
1,699,288	-		Sama_1400	0.46	-2.0
1,699,288	-		Sama_1400	0.46	-1.2
1,699,288	-		Sama_1400	0.46	-3.6
1,699,288	-		Sama_1400	0.46	-1.2
1,699,288	-		Sama_1400	0.46	-1.5
1,699,288	-		Sama_1400	0.46	-2.5
1,699,288	-		Sama_1400	0.46	-2.2
1,699,288	-		Sama_1400	0.46	-1.5
1,699,288	-		Sama_1400	0.46	-2.5
1,699,288	-		Sama_1400	0.46	-4.5
1,699,288	-		Sama_1400	0.46	-1.2
1,699,288	-		Sama_1400	0.46	-1.8
1,699,288	-		Sama_1400	0.46	-1.5
1,699,288	-		Sama_1400	0.46	-2.3
1,699,288	-		Sama_1400	0.46	-2.6
1,699,288	-		Sama_1400	0.46	-2.0
1,699,288	-		Sama_1400	0.46	-4.6
1,699,288	-		Sama_1400	0.46	-3.2
1,699,288	-		Sama_1400	0.46	-2.2
1,699,288	-		Sama_1400	0.46	-2.5
1,699,288	-		Sama_1400	0.46	-0.9
1,699,288	-		Sama_1400	0.46	-3.7
1,699,288	-		Sama_1400	0.46	-2.0
1,699,288	-		Sama_1400	0.46	-2.4
1,699,293	-		Sama_1400	0.46	-1.2