Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_822 and HP15_823 are separated by 51 nucleotides HP15_823 and HP15_824 overlap by 1 nucleotides HP15_824 and HP15_825 are separated by 17 nucleotides
HP15_822: HP15_822 - short-chain dehydrogenase/reductase SDR, at 840,290 to 841,108
_822
HP15_823: HP15_823 - phosphotransferase enzyme family protein, at 841,160 to 842,224
_823
HP15_824: HP15_824 - phosphoglycerate mutase family protein, at 842,224 to 842,913
_824
HP15_825: HP15_825 - short-chain dehydrogenase/reductase SDR, at 842,931 to 843,701
_825
Position (kb) 841
842
843 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 840.337 kb on + strand at 840.401 kb on - strand, within HP15_822 at 840.551 kb on + strand, within HP15_822 at 840.746 kb on - strand, within HP15_822 at 840.746 kb on - strand, within HP15_822 at 840.748 kb on + strand, within HP15_822 at 840.820 kb on - strand, within HP15_822 at 840.962 kb on + strand, within HP15_822 at 840.983 kb on + strand, within HP15_822 at 840.991 kb on - strand, within HP15_822 at 841.001 kb on - strand, within HP15_822 at 841.042 kb on - strand at 841.042 kb on - strand at 841.067 kb on + strand at 841.153 kb on + strand at 841.330 kb on + strand, within HP15_823 at 841.504 kb on + strand, within HP15_823 at 841.512 kb on + strand, within HP15_823 at 841.572 kb on + strand, within HP15_823 at 841.629 kb on + strand, within HP15_823 at 841.642 kb on - strand, within HP15_823 at 841.656 kb on - strand, within HP15_823 at 841.663 kb on - strand, within HP15_823 at 841.690 kb on + strand, within HP15_823 at 841.708 kb on + strand, within HP15_823 at 841.726 kb on + strand, within HP15_823 at 841.767 kb on + strand, within HP15_823 at 841.777 kb on - strand, within HP15_823 at 841.857 kb on + strand, within HP15_823 at 841.859 kb on + strand, within HP15_823 at 841.867 kb on - strand, within HP15_823 at 841.926 kb on + strand, within HP15_823 at 841.934 kb on - strand, within HP15_823 at 842.022 kb on + strand, within HP15_823 at 842.108 kb on + strand, within HP15_823 at 842.313 kb on - strand, within HP15_824 at 842.342 kb on - strand, within HP15_824 at 842.480 kb on - strand, within HP15_824 at 842.587 kb on + strand, within HP15_824 at 842.800 kb on + strand, within HP15_824 at 842.955 kb on - strand at 843.150 kb on - strand, within HP15_825 at 843.185 kb on - strand, within HP15_825 at 843.185 kb on - strand, within HP15_825 at 843.185 kb on - strand, within HP15_825 at 843.185 kb on - strand, within HP15_825
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 840,337 + -0.4 840,401 - HP15_822 0.14 -0.5 840,551 + HP15_822 0.32 +0.2 840,746 - HP15_822 0.56 -0.5 840,746 - HP15_822 0.56 -0.3 840,748 + HP15_822 0.56 +1.0 840,820 - HP15_822 0.65 +0.5 840,962 + HP15_822 0.82 +0.3 840,983 + HP15_822 0.85 -0.4 840,991 - HP15_822 0.86 +0.5 841,001 - HP15_822 0.87 +0.3 841,042 - -1.6 841,042 - -1.0 841,067 + +0.2 841,153 + -0.1 841,330 + HP15_823 0.16 -0.7 841,504 + HP15_823 0.32 -0.5 841,512 + HP15_823 0.33 +0.2 841,572 + HP15_823 0.39 +0.1 841,629 + HP15_823 0.44 -1.3 841,642 - HP15_823 0.45 -0.0 841,656 - HP15_823 0.47 -1.1 841,663 - HP15_823 0.47 -0.4 841,690 + HP15_823 0.50 -1.1 841,708 + HP15_823 0.51 -0.3 841,726 + HP15_823 0.53 -1.2 841,767 + HP15_823 0.57 -1.8 841,777 - HP15_823 0.58 -0.5 841,857 + HP15_823 0.65 -0.6 841,859 + HP15_823 0.66 +0.7 841,867 - HP15_823 0.66 +0.0 841,926 + HP15_823 0.72 -0.0 841,934 - HP15_823 0.73 -0.5 842,022 + HP15_823 0.81 +0.2 842,108 + HP15_823 0.89 -3.2 842,313 - HP15_824 0.13 +1.5 842,342 - HP15_824 0.17 -2.2 842,480 - HP15_824 0.37 +0.3 842,587 + HP15_824 0.53 -1.6 842,800 + HP15_824 0.83 +0.0 842,955 - -0.7 843,150 - HP15_825 0.28 +0.1 843,185 - HP15_825 0.33 +0.2 843,185 - HP15_825 0.33 -0.1 843,185 - HP15_825 0.33 +2.2 843,185 - HP15_825 0.33 +0.6
Or see this region's nucleotide sequence