Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0850 and Psest_0851 are separated by 72 nucleotides Psest_0851 and Psest_0852 are separated by 171 nucleotides
Psest_0850: Psest_0850 - glucokinase, proteobacterial type, at 920,458 to 921,417
_0850
Psest_0851: Psest_0851 - Transcriptional regulators, at 921,490 to 922,359
_0851
Psest_0852: Psest_0852 - glucose-6-phosphate 1-dehydrogenase, at 922,531 to 924,000
_0852
Position (kb) 921
922
923 Strain fitness (log2 ratio) -2
-1
0
1
2 at 920.587 kb on + strand, within Psest_0850 at 920.590 kb on + strand, within Psest_0850 at 920.590 kb on + strand, within Psest_0850 at 920.590 kb on + strand, within Psest_0850 at 920.590 kb on + strand, within Psest_0850 at 920.590 kb on + strand, within Psest_0850 at 920.591 kb on - strand, within Psest_0850 at 920.778 kb on + strand, within Psest_0850 at 920.778 kb on + strand, within Psest_0850 at 921.055 kb on + strand, within Psest_0850 at 921.055 kb on + strand, within Psest_0850 at 921.060 kb on + strand, within Psest_0850 at 921.060 kb on + strand, within Psest_0850 at 921.060 kb on + strand, within Psest_0850 at 921.061 kb on - strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.232 kb on + strand, within Psest_0850 at 921.233 kb on - strand, within Psest_0850 at 921.233 kb on - strand, within Psest_0850 at 921.233 kb on - strand, within Psest_0850 at 921.233 kb on - strand, within Psest_0850 at 921.233 kb on - strand, within Psest_0850 at 921.233 kb on - strand, within Psest_0850 at 921.233 kb on - strand, within Psest_0850 at 921.453 kb on + strand at 921.455 kb on + strand at 921.455 kb on + strand at 921.455 kb on + strand at 921.455 kb on + strand at 921.455 kb on + strand at 921.456 kb on - strand at 921.456 kb on - strand at 921.542 kb on - strand at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.647 kb on + strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.648 kb on - strand, within Psest_0851 at 921.797 kb on + strand, within Psest_0851 at 922.067 kb on + strand, within Psest_0851 at 922.067 kb on + strand, within Psest_0851 at 922.068 kb on - strand, within Psest_0851 at 922.068 kb on - strand, within Psest_0851 at 922.348 kb on + strand at 922.399 kb on + strand at 922.399 kb on + strand at 922.399 kb on + strand at 922.542 kb on - strand at 922.542 kb on - strand at 922.618 kb on + strand at 922.619 kb on - strand at 922.793 kb on - strand, within Psest_0852 at 922.897 kb on + strand, within Psest_0852 at 923.041 kb on + strand, within Psest_0852 at 923.041 kb on + strand, within Psest_0852 at 923.056 kb on + strand, within Psest_0852
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 920,587 + Psest_0850 0.13 -0.4 920,590 + Psest_0850 0.14 -0.7 920,590 + Psest_0850 0.14 +0.2 920,590 + Psest_0850 0.14 -0.9 920,590 + Psest_0850 0.14 -0.0 920,590 + Psest_0850 0.14 +0.5 920,591 - Psest_0850 0.14 +0.6 920,778 + Psest_0850 0.33 -0.5 920,778 + Psest_0850 0.33 +0.1 921,055 + Psest_0850 0.62 -0.9 921,055 + Psest_0850 0.62 +0.0 921,060 + Psest_0850 0.63 +1.3 921,060 + Psest_0850 0.63 +2.4 921,060 + Psest_0850 0.63 +1.1 921,061 - Psest_0850 0.63 -0.6 921,232 + Psest_0850 0.81 -0.6 921,232 + Psest_0850 0.81 -0.5 921,232 + Psest_0850 0.81 -0.6 921,232 + Psest_0850 0.81 +0.1 921,232 + Psest_0850 0.81 +1.1 921,232 + Psest_0850 0.81 -0.5 921,232 + Psest_0850 0.81 -0.7 921,232 + Psest_0850 0.81 -0.5 921,232 + Psest_0850 0.81 -0.9 921,232 + Psest_0850 0.81 +0.5 921,232 + Psest_0850 0.81 +0.4 921,232 + Psest_0850 0.81 +1.7 921,232 + Psest_0850 0.81 -0.0 921,233 - Psest_0850 0.81 -0.6 921,233 - Psest_0850 0.81 +0.5 921,233 - Psest_0850 0.81 +0.5 921,233 - Psest_0850 0.81 +0.5 921,233 - Psest_0850 0.81 -0.4 921,233 - Psest_0850 0.81 +1.7 921,233 - Psest_0850 0.81 -0.5 921,453 + -0.2 921,455 + -0.8 921,455 + -1.9 921,455 + +0.5 921,455 + +0.5 921,455 + +0.7 921,456 - -1.2 921,456 - -0.3 921,542 - +1.2 921,647 + Psest_0851 0.18 -0.9 921,647 + Psest_0851 0.18 -1.4 921,647 + Psest_0851 0.18 +1.1 921,647 + Psest_0851 0.18 -1.2 921,647 + Psest_0851 0.18 -0.2 921,647 + Psest_0851 0.18 -0.8 921,647 + Psest_0851 0.18 -0.5 921,647 + Psest_0851 0.18 +0.8 921,647 + Psest_0851 0.18 -1.5 921,647 + Psest_0851 0.18 +1.1 921,647 + Psest_0851 0.18 +0.1 921,647 + Psest_0851 0.18 -0.9 921,647 + Psest_0851 0.18 +0.4 921,647 + Psest_0851 0.18 -1.1 921,647 + Psest_0851 0.18 +0.8 921,647 + Psest_0851 0.18 +0.5 921,647 + Psest_0851 0.18 -0.5 921,647 + Psest_0851 0.18 -1.7 921,647 + Psest_0851 0.18 -0.2 921,647 + Psest_0851 0.18 -1.8 921,647 + Psest_0851 0.18 +1.1 921,647 + Psest_0851 0.18 -0.1 921,648 - Psest_0851 0.18 -0.5 921,648 - Psest_0851 0.18 -0.0 921,648 - Psest_0851 0.18 +0.0 921,648 - Psest_0851 0.18 -2.5 921,648 - Psest_0851 0.18 +0.2 921,648 - Psest_0851 0.18 +0.7 921,648 - Psest_0851 0.18 -1.0 921,648 - Psest_0851 0.18 +1.1 921,648 - Psest_0851 0.18 +1.3 921,648 - Psest_0851 0.18 -1.0 921,648 - Psest_0851 0.18 -1.0 921,648 - Psest_0851 0.18 -1.7 921,648 - Psest_0851 0.18 +1.1 921,648 - Psest_0851 0.18 +1.1 921,648 - Psest_0851 0.18 +0.5 921,648 - Psest_0851 0.18 +0.1 921,648 - Psest_0851 0.18 -0.6 921,648 - Psest_0851 0.18 +0.1 921,648 - Psest_0851 0.18 +0.2 921,648 - Psest_0851 0.18 -0.5 921,797 + Psest_0851 0.35 -0.0 922,067 + Psest_0851 0.66 -0.2 922,067 + Psest_0851 0.66 -0.1 922,068 - Psest_0851 0.66 +0.1 922,068 - Psest_0851 0.66 -0.1 922,348 + -2.7 922,399 + -0.1 922,399 + -1.9 922,399 + +0.3 922,542 - +1.3 922,542 - +1.0 922,618 + +1.4 922,619 - +2.1 922,793 - Psest_0852 0.18 +1.5 922,897 + Psest_0852 0.25 +0.5 923,041 + Psest_0852 0.35 +1.1 923,041 + Psest_0852 0.35 +0.2 923,056 + Psest_0852 0.36 -1.7
Or see this region's nucleotide sequence