Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c00460

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
49,833	-		PGA1_c00440	0.70	-0.3
49,844	+		PGA1_c00440	0.71	-0.7
49,852	-		PGA1_c00440	0.72	-0.3
49,862	+		PGA1_c00440	0.72	+2.4
49,878	-		PGA1_c00440	0.73	-2.3
49,878	-		PGA1_c00440	0.73	-0.2
49,878	-		PGA1_c00440	0.73	+1.2
49,906	+		PGA1_c00440	0.75	+0.3
49,909	-		PGA1_c00440	0.76	+0.3
49,914	-		PGA1_c00440	0.76	+1.3
49,914	-		PGA1_c00440	0.76	+1.3
49,916	+		PGA1_c00440	0.76	+1.7
49,919	-		PGA1_c00440	0.76	-0.1
49,921	+		PGA1_c00440	0.77	-0.5
49,924	-		PGA1_c00440	0.77	+0.4
49,968	-		PGA1_c00440	0.80	-1.3
49,968	-		PGA1_c00440	0.80	+1.3
49,979	+		PGA1_c00440	0.81	-1.7
50,000	-		PGA1_c00440	0.82	-1.4
50,035	+		PGA1_c00440	0.85	+2.5
50,044	-		PGA1_c00440	0.86	+1.3
50,044	-		PGA1_c00440	0.86	-1.6
50,045	+		PGA1_c00440	0.86	-0.8
50,045	+		PGA1_c00440	0.86	-0.7
50,045	+		PGA1_c00440	0.86	-2.1
50,046	+		PGA1_c00440	0.86	-1.1
50,053	-		PGA1_c00440	0.86	+0.3
50,058	+		PGA1_c00440	0.87	-1.4
50,058	+		PGA1_c00440	0.87	+0.2
50,060	+		PGA1_c00440	0.87	-1.3
50,060	+		PGA1_c00440	0.87	+0.2
50,066	-		PGA1_c00440	0.87	-0.1
50,066	-		PGA1_c00440	0.87	+0.4
50,105	+				-0.5
50,113	-				-0.7
50,113	-				+0.4
50,119	+				+0.6
50,120	-				+0.7
50,124	-				-0.9
50,130	+				+0.3
50,131	-				+0.8
50,132	-				+2.0
50,168	+				+0.1
50,178	+				+0.1
50,186	-				-2.1
50,196	-				+0.6
50,202	+				-0.1
50,219	+				+1.3
50,219	+				-0.4
50,227	-				+1.9
50,248	+				+0.8
50,268	-				-0.9
50,298	+				+1.0
50,303	+				-0.6
50,303	+				+1.3
50,303	+				+0.4
50,303	+				+1.7
50,303	+				-0.3
50,303	+				-0.8
50,303	+				-0.1
50,303	+				-1.0
50,303	+				-0.5
50,303	+				+0.9
50,303	+				-1.9
50,303	+				-0.7
50,303	+				-1.2
50,311	-				+0.4
50,311	-				-0.3
50,311	-				-0.7
50,311	-				-0.1
50,311	-				+0.5
50,311	-				-0.3
50,311	-				+1.4
50,311	-				+0.5
50,311	-				-1.1
50,311	-				-1.9
50,311	-				-0.4
50,311	-				-0.5
50,311	-				-0.0
50,311	-				+0.1
50,311	-				-0.7
50,363	+		PGA1_c00450	0.11	-0.9
50,363	+		PGA1_c00450	0.11	-0.8
50,371	+		PGA1_c00450	0.13	-1.2
50,384	-		PGA1_c00450	0.16	-0.5
50,467	-		PGA1_c00450	0.35	+0.7
50,482	-		PGA1_c00450	0.38	-0.9
50,557	+		PGA1_c00450	0.55	-1.1
50,562	+		PGA1_c00450	0.56	-2.2
50,603	+		PGA1_c00450	0.66	-1.4
50,629	-		PGA1_c00450	0.72	+1.1
50,677	-		PGA1_c00450	0.83	-1.8
50,704	+		PGA1_c00450	0.89	+0.6
50,709	+		PGA1_c00450	0.90	-0.4
50,722	-				-2.2
50,734	-				-0.1
50,776	+				+0.1
50,784	-				+0.4
50,794	+				+0.5
50,802	-				-1.1
50,857	+				-1.3
50,857	+				-1.5
50,859	+				-1.4
50,865	-				+0.3
50,867	-				+1.1
50,867	-				-0.8
50,867	-				+0.8
50,875	+				-1.2
50,881	+				-0.2
50,881	+				+0.4
50,883	-				-0.7
50,889	-				-1.5
50,916	-				-0.2
50,934	+		PGA1_c00460	0.10	+0.5
51,016	-		PGA1_c00460	0.17	-3.1
51,049	-		PGA1_c00460	0.20	-0.5
51,051	-		PGA1_c00460	0.20	-2.4
51,084	-		PGA1_c00460	0.22	-2.2
51,118	-		PGA1_c00460	0.25	+0.8
51,118	-		PGA1_c00460	0.25	-0.4
51,135	+		PGA1_c00460	0.27	-1.5
51,163	+		PGA1_c00460	0.29	-0.4
51,173	+		PGA1_c00460	0.30	+0.3
51,173	+		PGA1_c00460	0.30	-2.4
51,198	-		PGA1_c00460	0.32	-1.0
51,233	+		PGA1_c00460	0.35	+1.2
51,239	-		PGA1_c00460	0.35	-1.5
51,239	-		PGA1_c00460	0.35	+0.5
51,256	+		PGA1_c00460	0.37	-1.7
51,268	+		PGA1_c00460	0.38	+0.2
51,295	+		PGA1_c00460	0.40	+0.1
51,295	-		PGA1_c00460	0.40	+1.0
51,312	-		PGA1_c00460	0.41	-0.3
51,387	+		PGA1_c00460	0.47	-0.3
51,398	+		PGA1_c00460	0.48	-0.7
51,398	+		PGA1_c00460	0.48	+0.2
51,398	+		PGA1_c00460	0.48	-0.1
51,420	+		PGA1_c00460	0.50	-2.4
51,487	+		PGA1_c00460	0.56	-0.9
51,500	-		PGA1_c00460	0.57	-0.1
51,502	+		PGA1_c00460	0.57	-0.1
51,510	-		PGA1_c00460	0.58	-1.6
51,532	+		PGA1_c00460	0.59	+0.5
51,590	+		PGA1_c00460	0.64	+0.1
51,640	+		PGA1_c00460	0.68	+0.7
51,663	-		PGA1_c00460	0.70	+0.4
51,663	-		PGA1_c00460	0.70	-0.2
51,673	-		PGA1_c00460	0.71	-0.3
51,702	-		PGA1_c00460	0.73	+0.1
51,726	+		PGA1_c00460	0.75	+1.9
51,733	+		PGA1_c00460	0.76	-0.5
51,734	-		PGA1_c00460	0.76	-2.2
51,738	+		PGA1_c00460	0.76	+1.2
51,738	+		PGA1_c00460	0.76	+0.5
51,738	+		PGA1_c00460	0.76	-0.5
51,738	+		PGA1_c00460	0.76	-1.7
51,738	+		PGA1_c00460	0.76	-2.3
51,741	-		PGA1_c00460	0.77	-0.6
51,746	-		PGA1_c00460	0.77	+0.0
51,754	+		PGA1_c00460	0.78	+0.3
51,768	+		PGA1_c00460	0.79	-2.2
51,774	-		PGA1_c00460	0.79	-0.3
51,774	-		PGA1_c00460	0.79	-1.7
51,891	-		PGA1_c00460	0.89	-0.0
51,906	-				-0.5
51,906	-				+0.6
51,930	+				+0.7
51,943	+				-0.7
51,943	+				+1.5
51,943	+				+1.3
51,943	+				-0.9
51,951	-				-1.0
51,951	-				+1.5
51,951	-				-0.4
51,961	-				-1.3
51,961	-				+0.5
51,982	+				+0.4
51,990	-				+0.2
52,004	-				-0.1
52,019	+				-0.4
52,109	-				-0.1
52,111	+				+0.1
52,117	+				-1.1
52,117	+				+1.1
52,117	+				-0.2
52,117	+				-0.7
52,118	+				-1.2
52,118	+				-0.6
52,118	+				+0.5
52,118	+				+0.5
52,119	-				-1.4
52,126	-				+1.2
52,126	-				+0.5
52,126	-				+0.1
52,153	+				-0.9
52,154	+				-0.8
52,158	+				+0.7
52,158	+				-2.3
52,158	+				-2.8
52,161	-				-3.0
52,167	-				+1.7
52,169	+				+0.4
52,172	-				-0.4
52,172	-				+1.6
52,183	+				-0.6
52,183	+				-0.1
52,199	+				+1.6
52,207	-				+0.5
52,209	+				+0.1
52,209	+				+1.4
52,217	-				+0.7
52,217	-				-0.3
52,273	-		PGA1_c00470	0.25	-0.6
52,321	+		PGA1_c00470	0.40	+0.6
52,323	-		PGA1_c00470	0.41	+0.6
52,329	-		PGA1_c00470	0.43	-2.8
52,396	-		PGA1_c00470	0.64	+1.7
52,421	+		PGA1_c00470	0.72	-1.5
52,421	+		PGA1_c00470	0.72	-0.5
52,421	+		PGA1_c00470	0.72	-1.0
52,421	+		PGA1_c00470	0.72	-0.1
52,426	+		PGA1_c00470	0.74	-1.2
52,429	-		PGA1_c00470	0.75	-0.5
52,429	-		PGA1_c00470	0.75	-0.5
52,429	-		PGA1_c00470	0.75	+0.1
52,464	-		PGA1_c00470	0.86	-1.2
52,477	-				-1.5
52,490	+				+1.3
52,500	+				+0.8
52,541	+				+0.7
52,549	-				+0.9
52,554	-				+0.1
52,554	-				-1.9
52,632	-				-0.5
52,634	+				+2.3
52,634	+				-0.8
52,642	+				+0.9
52,642	-				+1.2
52,829	-		PGA1_c00480	0.18	+0.8
52,832	-		PGA1_c00480	0.18	+0.3
52,847	-		PGA1_c00480	0.19	+3.7
52,850	+		PGA1_c00480	0.19	-1.1
52,858	-		PGA1_c00480	0.19	+1.2
52,869	+		PGA1_c00480	0.20	-0.7
52,877	-		PGA1_c00480	0.21	-1.2
52,882	-		PGA1_c00480	0.21	-1.8
52,896	+		PGA1_c00480	0.22	+0.8
52,953	+		PGA1_c00480	0.25	+0.7
52,975	+		PGA1_c00480	0.27	+0.3
52,980	+		PGA1_c00480	0.27	-0.1
52,980	+		PGA1_c00480	0.27	+1.7
52,980	+		PGA1_c00480	0.27	-0.6
52,983	-		PGA1_c00480	0.27	+0.9
52,983	-		PGA1_c00480	0.27	-0.1
52,983	-		PGA1_c00480	0.27	+0.2
52,985	+		PGA1_c00480	0.27	-1.1