Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3632 and HP15_3633 are separated by 8 nucleotides HP15_3633 and HP15_3635 are separated by 66 nucleotides HP15_3635 and HP15_3634 are separated by 14 nucleotides HP15_3634 and HP15_3636 are separated by 18 nucleotides
HP15_3632: HP15_3632 - multicopper oxidase-like protein, at 3,827,776 to 3,828,459
_3632
HP15_3633: HP15_3633 - protein-S-isoprenylcysteine methyltransferase, at 3,828,468 to 3,828,869
_3633
HP15_3635: HP15_3635 - conserved hypothetical protein, at 3,828,936 to 3,829,709
_3635
HP15_3634: HP15_3634 - hypothetical protein, at 3,829,724 to 3,829,846
_3634
HP15_3636: HP15_3636 - protein containing molybdopterin oxidoreductase / molybdopterin dinucleotide-binding region, at 3,829,865 to 3,831,976
_3636
Position (kb)
3828
3829
3830 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3827.939 kb on + strand, within HP15_3632 at 3827.947 kb on - strand, within HP15_3632 at 3828.026 kb on - strand, within HP15_3632 at 3828.128 kb on + strand, within HP15_3632 at 3828.128 kb on + strand, within HP15_3632 at 3828.128 kb on + strand, within HP15_3632 at 3828.136 kb on - strand, within HP15_3632 at 3828.136 kb on - strand, within HP15_3632 at 3828.315 kb on + strand, within HP15_3632 at 3828.315 kb on + strand, within HP15_3632 at 3828.344 kb on + strand, within HP15_3632 at 3828.424 kb on + strand at 3828.594 kb on - strand, within HP15_3633 at 3828.662 kb on + strand, within HP15_3633 at 3828.665 kb on - strand, within HP15_3633 at 3828.719 kb on + strand, within HP15_3633 at 3828.719 kb on + strand, within HP15_3633 at 3828.720 kb on + strand, within HP15_3633 at 3828.855 kb on + strand at 3828.858 kb on - strand at 3828.875 kb on - strand at 3828.971 kb on - strand at 3828.971 kb on - strand at 3829.186 kb on - strand, within HP15_3635 at 3829.205 kb on + strand, within HP15_3635 at 3829.253 kb on - strand, within HP15_3635 at 3829.294 kb on + strand, within HP15_3635 at 3829.294 kb on + strand, within HP15_3635 at 3829.302 kb on - strand, within HP15_3635 at 3829.302 kb on - strand, within HP15_3635 at 3829.321 kb on + strand, within HP15_3635 at 3829.329 kb on - strand, within HP15_3635 at 3829.372 kb on + strand, within HP15_3635 at 3829.415 kb on + strand, within HP15_3635 at 3829.454 kb on + strand, within HP15_3635 at 3829.492 kb on + strand, within HP15_3635 at 3829.492 kb on - strand, within HP15_3635 at 3829.545 kb on + strand, within HP15_3635 at 3829.550 kb on + strand, within HP15_3635 at 3829.563 kb on - strand, within HP15_3635 at 3829.563 kb on - strand, within HP15_3635 at 3829.565 kb on + strand, within HP15_3635 at 3829.831 kb on - strand, within HP15_3634 at 3829.833 kb on + strand, within HP15_3634 at 3829.892 kb on - strand at 3829.966 kb on + strand at 3829.981 kb on - strand at 3829.988 kb on - strand at 3830.045 kb on + strand at 3830.088 kb on + strand, within HP15_3636 at 3830.163 kb on + strand, within HP15_3636 at 3830.178 kb on + strand, within HP15_3636 at 3830.178 kb on + strand, within HP15_3636 at 3830.178 kb on + strand, within HP15_3636 at 3830.247 kb on - strand, within HP15_3636 at 3830.271 kb on - strand, within HP15_3636 at 3830.313 kb on + strand, within HP15_3636 at 3830.443 kb on + strand, within HP15_3636 at 3830.483 kb on - strand, within HP15_3636 at 3830.528 kb on - strand, within HP15_3636 at 3830.555 kb on + strand, within HP15_3636 at 3830.566 kb on + strand, within HP15_3636 at 3830.574 kb on + strand, within HP15_3636 at 3830.574 kb on + strand, within HP15_3636 at 3830.580 kb on - strand, within HP15_3636 at 3830.599 kb on - strand, within HP15_3636 at 3830.604 kb on + strand, within HP15_3636 at 3830.612 kb on - strand, within HP15_3636 at 3830.612 kb on - strand, within HP15_3636 at 3830.642 kb on - strand, within HP15_3636
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,827,939 + HP15_3632 0.24 -1.2 3,827,947 - HP15_3632 0.25 +0.4 3,828,026 - HP15_3632 0.37 +0.6 3,828,128 + HP15_3632 0.51 +0.4 3,828,128 + HP15_3632 0.51 +1.1 3,828,128 + HP15_3632 0.51 -0.8 3,828,136 - HP15_3632 0.53 -0.1 3,828,136 - HP15_3632 0.53 +0.7 3,828,315 + HP15_3632 0.79 -2.7 3,828,315 + HP15_3632 0.79 +0.1 3,828,344 + HP15_3632 0.83 -1.3 3,828,424 + -0.2 3,828,594 - HP15_3633 0.31 -0.5 3,828,662 + HP15_3633 0.48 +0.2 3,828,665 - HP15_3633 0.49 -0.1 3,828,719 + HP15_3633 0.62 +0.3 3,828,719 + HP15_3633 0.62 +2.4 3,828,720 + HP15_3633 0.63 +1.9 3,828,855 + -0.1 3,828,858 - +0.5 3,828,875 - -0.2 3,828,971 - +0.0 3,828,971 - -0.9 3,829,186 - HP15_3635 0.32 +0.5 3,829,205 + HP15_3635 0.35 -0.0 3,829,253 - HP15_3635 0.41 -0.3 3,829,294 + HP15_3635 0.46 -0.0 3,829,294 + HP15_3635 0.46 -0.9 3,829,302 - HP15_3635 0.47 -0.5 3,829,302 - HP15_3635 0.47 -0.4 3,829,321 + HP15_3635 0.50 -0.2 3,829,329 - HP15_3635 0.51 -0.0 3,829,372 + HP15_3635 0.56 +0.1 3,829,415 + HP15_3635 0.62 +0.2 3,829,454 + HP15_3635 0.67 +0.2 3,829,492 + HP15_3635 0.72 -0.7 3,829,492 - HP15_3635 0.72 -0.7 3,829,545 + HP15_3635 0.79 -0.2 3,829,550 + HP15_3635 0.79 -0.3 3,829,563 - HP15_3635 0.81 -0.1 3,829,563 - HP15_3635 0.81 -1.1 3,829,565 + HP15_3635 0.81 -0.2 3,829,831 - HP15_3634 0.87 +0.4 3,829,833 + HP15_3634 0.89 -0.7 3,829,892 - -1.6 3,829,966 + -0.4 3,829,981 - -0.4 3,829,988 - -0.1 3,830,045 + -0.2 3,830,088 + HP15_3636 0.11 -0.2 3,830,163 + HP15_3636 0.14 -2.5 3,830,178 + HP15_3636 0.15 -1.2 3,830,178 + HP15_3636 0.15 -0.6 3,830,178 + HP15_3636 0.15 +0.1 3,830,247 - HP15_3636 0.18 -1.9 3,830,271 - HP15_3636 0.19 -1.0 3,830,313 + HP15_3636 0.21 +1.4 3,830,443 + HP15_3636 0.27 -0.3 3,830,483 - HP15_3636 0.29 +0.2 3,830,528 - HP15_3636 0.31 -0.0 3,830,555 + HP15_3636 0.33 -0.4 3,830,566 + HP15_3636 0.33 +0.4 3,830,574 + HP15_3636 0.34 -1.3 3,830,574 + HP15_3636 0.34 +1.5 3,830,580 - HP15_3636 0.34 -0.2 3,830,599 - HP15_3636 0.35 -0.8 3,830,604 + HP15_3636 0.35 -0.8 3,830,612 - HP15_3636 0.35 -0.8 3,830,612 - HP15_3636 0.35 +0.7 3,830,642 - HP15_3636 0.37 +0.2
Or see this region's nucleotide sequence