Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3522 and HP15_3523 overlap by 14 nucleotides HP15_3523 and HP15_3524 are separated by 91 nucleotides HP15_3524 and HP15_3525 overlap by 19 nucleotides HP15_3525 and HP15_3526 are separated by 63 nucleotides
HP15_3522: HP15_3522 - zinc import ATP-binding protein znuC, at 3,710,211 to 3,710,978
_3522
HP15_3523: HP15_3523 - zinc ABC transporter, permease protein, at 3,710,965 to 3,711,777
_3523
HP15_3524: HP15_3524 - PAS/PAC sensor protein, at 3,711,869 to 3,712,891
_3524
HP15_3525: HP15_3525 - protein containing iron sulfur domain-containing, CDGSH-type domains, at 3,712,873 to 3,713,121
_3525
HP15_3526: HP15_3526 - conserved hypothetical protein, at 3,713,185 to 3,714,210
_3526
Position (kb)
3711
3712
3713 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 3710.914 kb on + strand at 3710.922 kb on - strand at 3711.267 kb on + strand, within HP15_3523 at 3711.707 kb on - strand at 3711.744 kb on + strand at 3711.815 kb on - strand at 3711.838 kb on - strand at 3711.881 kb on + strand at 3711.953 kb on - strand at 3712.131 kb on + strand, within HP15_3524 at 3712.139 kb on - strand, within HP15_3524 at 3712.157 kb on - strand, within HP15_3524 at 3712.236 kb on - strand, within HP15_3524 at 3712.270 kb on + strand, within HP15_3524 at 3712.287 kb on - strand, within HP15_3524 at 3712.305 kb on + strand, within HP15_3524 at 3712.369 kb on - strand, within HP15_3524 at 3712.379 kb on + strand, within HP15_3524 at 3712.380 kb on + strand, within HP15_3524 at 3712.380 kb on + strand, within HP15_3524 at 3712.380 kb on + strand, within HP15_3524 at 3712.386 kb on + strand, within HP15_3524 at 3712.391 kb on + strand, within HP15_3524 at 3712.394 kb on - strand, within HP15_3524 at 3712.421 kb on + strand, within HP15_3524 at 3712.442 kb on - strand, within HP15_3524 at 3712.513 kb on + strand, within HP15_3524 at 3712.541 kb on - strand, within HP15_3524 at 3712.555 kb on - strand, within HP15_3524 at 3712.574 kb on - strand, within HP15_3524 at 3712.630 kb on - strand, within HP15_3524 at 3712.655 kb on - strand, within HP15_3524 at 3712.671 kb on + strand, within HP15_3524 at 3712.977 kb on + strand, within HP15_3525 at 3712.985 kb on - strand, within HP15_3525 at 3712.995 kb on + strand, within HP15_3525 at 3713.076 kb on - strand, within HP15_3525 at 3713.183 kb on + strand at 3713.192 kb on + strand at 3713.219 kb on - strand at 3713.232 kb on + strand at 3713.276 kb on + strand at 3713.284 kb on - strand at 3713.580 kb on - strand, within HP15_3526 at 3713.596 kb on + strand, within HP15_3526 at 3713.609 kb on + strand, within HP15_3526 at 3713.676 kb on + strand, within HP15_3526
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,710,914 + +0.2 3,710,922 - -3.7 3,711,267 + HP15_3523 0.37 -1.0 3,711,707 - -4.8 3,711,744 + -4.2 3,711,815 - +0.9 3,711,838 - -0.1 3,711,881 + -0.0 3,711,953 - -0.5 3,712,131 + HP15_3524 0.26 -0.6 3,712,139 - HP15_3524 0.26 +0.6 3,712,157 - HP15_3524 0.28 -0.3 3,712,236 - HP15_3524 0.36 +0.2 3,712,270 + HP15_3524 0.39 -0.5 3,712,287 - HP15_3524 0.41 -0.5 3,712,305 + HP15_3524 0.43 -0.4 3,712,369 - HP15_3524 0.49 -0.1 3,712,379 + HP15_3524 0.50 -0.3 3,712,380 + HP15_3524 0.50 -0.5 3,712,380 + HP15_3524 0.50 -0.2 3,712,380 + HP15_3524 0.50 -0.1 3,712,386 + HP15_3524 0.51 -1.4 3,712,391 + HP15_3524 0.51 +0.6 3,712,394 - HP15_3524 0.51 +0.1 3,712,421 + HP15_3524 0.54 -0.4 3,712,442 - HP15_3524 0.56 +0.5 3,712,513 + HP15_3524 0.63 +0.3 3,712,541 - HP15_3524 0.66 -1.0 3,712,555 - HP15_3524 0.67 +0.8 3,712,574 - HP15_3524 0.69 +0.1 3,712,630 - HP15_3524 0.74 +0.5 3,712,655 - HP15_3524 0.77 +1.2 3,712,671 + HP15_3524 0.78 -0.3 3,712,977 + HP15_3525 0.42 -0.9 3,712,985 - HP15_3525 0.45 -0.1 3,712,995 + HP15_3525 0.49 -0.1 3,713,076 - HP15_3525 0.82 +0.2 3,713,183 + +0.0 3,713,192 + -0.4 3,713,219 - -0.2 3,713,232 + +0.8 3,713,276 + +1.9 3,713,284 - -0.4 3,713,580 - HP15_3526 0.38 -0.5 3,713,596 + HP15_3526 0.40 -0.8 3,713,609 + HP15_3526 0.41 -1.8 3,713,676 + HP15_3526 0.48 +0.7
Or see this region's nucleotide sequence