Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3381 and HP15_3382 are separated by 170 nucleotides HP15_3382 and HP15_3383 are separated by 82 nucleotides
HP15_3381: HP15_3381 - MscS mechanosensitive ion channel, at 3,549,918 to 3,550,751
_3381
HP15_3382: HP15_3382 - YbaK/prolyl-tRNA synthetase associated region, at 3,550,922 to 3,551,479
_3382
HP15_3383: HP15_3383 - ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family, at 3,551,562 to 3,552,857
_3383
Position (kb)
3550
3551
3552 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3549.996 kb on + strand at 3550.033 kb on - strand, within HP15_3381 at 3550.129 kb on - strand, within HP15_3381 at 3550.220 kb on + strand, within HP15_3381 at 3550.300 kb on - strand, within HP15_3381 at 3550.415 kb on + strand, within HP15_3381 at 3550.505 kb on + strand, within HP15_3381 at 3550.505 kb on + strand, within HP15_3381 at 3550.513 kb on - strand, within HP15_3381 at 3550.559 kb on + strand, within HP15_3381 at 3550.574 kb on - strand, within HP15_3381 at 3550.744 kb on - strand at 3550.806 kb on - strand at 3550.806 kb on - strand at 3550.807 kb on + strand at 3550.981 kb on + strand, within HP15_3382 at 3550.988 kb on - strand, within HP15_3382 at 3551.226 kb on + strand, within HP15_3382 at 3551.430 kb on + strand at 3551.433 kb on - strand at 3551.438 kb on - strand at 3551.455 kb on + strand at 3551.542 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,549,996 + -1.2 3,550,033 - HP15_3381 0.14 -0.1 3,550,129 - HP15_3381 0.25 -0.8 3,550,220 + HP15_3381 0.36 -1.0 3,550,300 - HP15_3381 0.46 +0.9 3,550,415 + HP15_3381 0.60 -0.5 3,550,505 + HP15_3381 0.70 +0.2 3,550,505 + HP15_3381 0.70 -2.4 3,550,513 - HP15_3381 0.71 -0.5 3,550,559 + HP15_3381 0.77 +2.1 3,550,574 - HP15_3381 0.79 -1.9 3,550,744 - -0.2 3,550,806 - -0.1 3,550,806 - -0.6 3,550,807 + -0.0 3,550,981 + HP15_3382 0.11 -0.7 3,550,988 - HP15_3382 0.12 -0.5 3,551,226 + HP15_3382 0.54 -0.9 3,551,430 + +0.3 3,551,433 - +0.1 3,551,438 - +0.3 3,551,455 + +0.3 3,551,542 + +0.3
Or see this region's nucleotide sequence