Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3368 and HP15_3369 are separated by 194 nucleotides HP15_3369 and HP15_3370 are separated by 22 nucleotides
HP15_3368: HP15_3368 - membrane protein containing DUF1282, at 3,535,485 to 3,536,096
_3368
HP15_3369: HP15_3369 - glutathione S-transferase-like protein, at 3,536,291 to 3,536,863
_3369
HP15_3370: HP15_3370 - alanine dehydrogenase, at 3,536,886 to 3,538,004
_3370
Position (kb)
3536
3537 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3535.309 kb on + strand at 3535.317 kb on - strand at 3535.318 kb on - strand at 3535.502 kb on - strand at 3535.687 kb on + strand, within HP15_3368 at 3535.705 kb on + strand, within HP15_3368 at 3535.705 kb on + strand, within HP15_3368 at 3535.705 kb on + strand, within HP15_3368 at 3535.705 kb on + strand, within HP15_3368 at 3535.713 kb on - strand, within HP15_3368 at 3535.713 kb on - strand, within HP15_3368 at 3535.731 kb on + strand, within HP15_3368 at 3535.731 kb on + strand, within HP15_3368 at 3535.731 kb on + strand, within HP15_3368 at 3535.739 kb on - strand, within HP15_3368 at 3535.749 kb on - strand, within HP15_3368 at 3535.760 kb on + strand, within HP15_3368 at 3535.768 kb on - strand, within HP15_3368 at 3535.770 kb on + strand, within HP15_3368 at 3535.825 kb on + strand, within HP15_3368 at 3535.825 kb on + strand, within HP15_3368 at 3535.825 kb on + strand, within HP15_3368 at 3535.833 kb on - strand, within HP15_3368 at 3535.867 kb on - strand, within HP15_3368 at 3535.893 kb on + strand, within HP15_3368 at 3536.083 kb on + strand at 3536.290 kb on + strand at 3536.305 kb on + strand at 3536.403 kb on - strand, within HP15_3369 at 3536.469 kb on - strand, within HP15_3369 at 3536.609 kb on - strand, within HP15_3369 at 3536.758 kb on + strand, within HP15_3369 at 3536.820 kb on - strand at 3536.855 kb on - strand at 3536.902 kb on + strand at 3536.910 kb on - strand at 3536.922 kb on - strand at 3536.922 kb on - strand at 3536.922 kb on - strand at 3536.991 kb on - strand at 3536.991 kb on - strand at 3537.182 kb on - strand, within HP15_3370 at 3537.194 kb on + strand, within HP15_3370 at 3537.310 kb on + strand, within HP15_3370 at 3537.363 kb on - strand, within HP15_3370 at 3537.398 kb on + strand, within HP15_3370 at 3537.411 kb on + strand, within HP15_3370 at 3537.419 kb on - strand, within HP15_3370 at 3537.419 kb on - strand, within HP15_3370 at 3537.465 kb on + strand, within HP15_3370 at 3537.480 kb on + strand, within HP15_3370 at 3537.551 kb on - strand, within HP15_3370 at 3537.621 kb on + strand, within HP15_3370 at 3537.651 kb on + strand, within HP15_3370 at 3537.651 kb on + strand, within HP15_3370 at 3537.678 kb on - strand, within HP15_3370 at 3537.710 kb on + strand, within HP15_3370 at 3537.734 kb on - strand, within HP15_3370
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,535,309 + -0.4 3,535,317 - +0.0 3,535,318 - +2.1 3,535,502 - -1.9 3,535,687 + HP15_3368 0.33 +0.1 3,535,705 + HP15_3368 0.36 -0.2 3,535,705 + HP15_3368 0.36 +1.0 3,535,705 + HP15_3368 0.36 -0.4 3,535,705 + HP15_3368 0.36 +0.5 3,535,713 - HP15_3368 0.37 +0.2 3,535,713 - HP15_3368 0.37 +0.5 3,535,731 + HP15_3368 0.40 +0.3 3,535,731 + HP15_3368 0.40 -0.4 3,535,731 + HP15_3368 0.40 -0.3 3,535,739 - HP15_3368 0.42 +0.7 3,535,749 - HP15_3368 0.43 -0.3 3,535,760 + HP15_3368 0.45 -0.3 3,535,768 - HP15_3368 0.46 -1.8 3,535,770 + HP15_3368 0.47 +0.2 3,535,825 + HP15_3368 0.56 +0.1 3,535,825 + HP15_3368 0.56 -0.1 3,535,825 + HP15_3368 0.56 +1.0 3,535,833 - HP15_3368 0.57 +0.1 3,535,867 - HP15_3368 0.62 +0.9 3,535,893 + HP15_3368 0.67 -0.7 3,536,083 + +3.0 3,536,290 + +0.1 3,536,305 + +0.4 3,536,403 - HP15_3369 0.20 -0.4 3,536,469 - HP15_3369 0.31 +0.2 3,536,609 - HP15_3369 0.55 +0.1 3,536,758 + HP15_3369 0.82 -0.7 3,536,820 - +0.2 3,536,855 - +0.4 3,536,902 + +0.8 3,536,910 - +0.3 3,536,922 - +0.6 3,536,922 - -0.2 3,536,922 - +0.3 3,536,991 - -0.2 3,536,991 - +0.6 3,537,182 - HP15_3370 0.26 -0.1 3,537,194 + HP15_3370 0.28 -0.5 3,537,310 + HP15_3370 0.38 -0.9 3,537,363 - HP15_3370 0.43 -2.6 3,537,398 + HP15_3370 0.46 +0.1 3,537,411 + HP15_3370 0.47 -0.3 3,537,419 - HP15_3370 0.48 +0.2 3,537,419 - HP15_3370 0.48 -1.1 3,537,465 + HP15_3370 0.52 -0.1 3,537,480 + HP15_3370 0.53 -0.2 3,537,551 - HP15_3370 0.59 -0.3 3,537,621 + HP15_3370 0.66 +0.4 3,537,651 + HP15_3370 0.68 +0.3 3,537,651 + HP15_3370 0.68 -0.1 3,537,678 - HP15_3370 0.71 -0.2 3,537,710 + HP15_3370 0.74 -1.0 3,537,734 - HP15_3370 0.76 -0.1
Or see this region's nucleotide sequence