Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3326 and HP15_3327 are separated by 176 nucleotides HP15_3327 and HP15_3328 are separated by 114 nucleotides HP15_3328 and HP15_3329 are separated by 192 nucleotides
HP15_3326: HP15_3326 - cytochrome c, class I, at 3,486,339 to 3,486,947
_3326
HP15_3327: HP15_3327 - GTP-binding protein EngB, at 3,487,124 to 3,487,771
_3327
HP15_3328: HP15_3328 - transcriptional regulator, TetR family, at 3,487,886 to 3,488,635
_3328
HP15_3329: HP15_3329 - NAD-dependent aldehyde dehydrogenase, at 3,488,828 to 3,490,273
_3329
Position (kb)
3487
3488
3489 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3486.992 kb on - strand at 3487.081 kb on - strand at 3487.815 kb on - strand at 3487.897 kb on - strand at 3487.906 kb on - strand at 3488.125 kb on - strand, within HP15_3328 at 3488.134 kb on + strand, within HP15_3328 at 3488.166 kb on + strand, within HP15_3328 at 3488.308 kb on - strand, within HP15_3328 at 3488.341 kb on - strand, within HP15_3328 at 3488.391 kb on + strand, within HP15_3328 at 3488.519 kb on - strand, within HP15_3328 at 3488.578 kb on + strand at 3488.978 kb on - strand, within HP15_3329 at 3489.114 kb on + strand, within HP15_3329 at 3489.138 kb on + strand, within HP15_3329 at 3489.148 kb on + strand, within HP15_3329 at 3489.156 kb on - strand, within HP15_3329 at 3489.181 kb on + strand, within HP15_3329 at 3489.181 kb on + strand, within HP15_3329 at 3489.189 kb on - strand, within HP15_3329 at 3489.196 kb on - strand, within HP15_3329 at 3489.307 kb on + strand, within HP15_3329 at 3489.309 kb on + strand, within HP15_3329 at 3489.309 kb on + strand, within HP15_3329 at 3489.310 kb on - strand, within HP15_3329 at 3489.317 kb on - strand, within HP15_3329 at 3489.317 kb on - strand, within HP15_3329 at 3489.405 kb on - strand, within HP15_3329 at 3489.495 kb on + strand, within HP15_3329 at 3489.495 kb on + strand, within HP15_3329 at 3489.503 kb on - strand, within HP15_3329 at 3489.516 kb on - strand, within HP15_3329 at 3489.529 kb on - strand, within HP15_3329 at 3489.593 kb on + strand, within HP15_3329 at 3489.615 kb on + strand, within HP15_3329
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,486,992 - +0.3 3,487,081 - -0.2 3,487,815 - +0.0 3,487,897 - -3.6 3,487,906 - -0.4 3,488,125 - HP15_3328 0.32 +0.9 3,488,134 + HP15_3328 0.33 +0.3 3,488,166 + HP15_3328 0.37 +0.6 3,488,308 - HP15_3328 0.56 +0.1 3,488,341 - HP15_3328 0.61 +0.5 3,488,391 + HP15_3328 0.67 -0.1 3,488,519 - HP15_3328 0.84 +2.5 3,488,578 + -0.3 3,488,978 - HP15_3329 0.10 -0.6 3,489,114 + HP15_3329 0.20 +0.2 3,489,138 + HP15_3329 0.21 +0.2 3,489,148 + HP15_3329 0.22 +0.0 3,489,156 - HP15_3329 0.23 -0.2 3,489,181 + HP15_3329 0.24 +2.6 3,489,181 + HP15_3329 0.24 -0.9 3,489,189 - HP15_3329 0.25 +0.1 3,489,196 - HP15_3329 0.25 -0.0 3,489,307 + HP15_3329 0.33 +0.4 3,489,309 + HP15_3329 0.33 +0.0 3,489,309 + HP15_3329 0.33 -0.6 3,489,310 - HP15_3329 0.33 -1.0 3,489,317 - HP15_3329 0.34 +0.4 3,489,317 - HP15_3329 0.34 -0.2 3,489,405 - HP15_3329 0.40 +1.9 3,489,495 + HP15_3329 0.46 +0.3 3,489,495 + HP15_3329 0.46 -0.4 3,489,503 - HP15_3329 0.47 +0.5 3,489,516 - HP15_3329 0.48 +0.2 3,489,529 - HP15_3329 0.48 -1.2 3,489,593 + HP15_3329 0.53 +0.5 3,489,615 + HP15_3329 0.54 -0.2
Or see this region's nucleotide sequence