Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3236 and HP15_3237 overlap by 4 nucleotides HP15_3237 and HP15_3238 are separated by 13 nucleotides HP15_3238 and HP15_3239 are separated by 7 nucleotides
HP15_3236: HP15_3236 - membrane protein containing DUF1538, at 3,390,171 to 3,391,631
_3236
HP15_3237: HP15_3237 - nitrogen regulatory protein P-II family protein-like protein, at 3,391,628 to 3,391,978
_3237
HP15_3238: HP15_3238 - protein containing cystathionine beta-synthase, core domain, at 3,391,992 to 3,392,381
_3238
HP15_3239: HP15_3239 - ion channel DMI1, at 3,392,389 to 3,394,335
_3239
Position (kb)
3391
3392
3393 Strain fitness (log2 ratio)
-1
0
1
2 at 3391.046 kb on + strand, within HP15_3236 at 3391.047 kb on + strand, within HP15_3236 at 3391.059 kb on + strand, within HP15_3236 at 3391.059 kb on + strand, within HP15_3236 at 3391.067 kb on - strand, within HP15_3236 at 3391.113 kb on - strand, within HP15_3236 at 3391.133 kb on + strand, within HP15_3236 at 3391.235 kb on + strand, within HP15_3236 at 3391.278 kb on - strand, within HP15_3236 at 3391.401 kb on + strand, within HP15_3236 at 3391.452 kb on - strand, within HP15_3236 at 3391.493 kb on - strand at 3391.506 kb on - strand at 3391.523 kb on - strand at 3391.556 kb on - strand at 3391.557 kb on - strand at 3391.670 kb on + strand, within HP15_3237 at 3391.774 kb on + strand, within HP15_3237 at 3391.881 kb on + strand, within HP15_3237 at 3391.894 kb on - strand, within HP15_3237 at 3391.923 kb on + strand, within HP15_3237 at 3391.941 kb on - strand, within HP15_3237 at 3391.967 kb on + strand at 3391.987 kb on - strand at 3392.076 kb on + strand, within HP15_3238 at 3392.076 kb on + strand, within HP15_3238 at 3392.076 kb on + strand, within HP15_3238 at 3392.369 kb on - strand at 3392.409 kb on - strand at 3392.411 kb on - strand at 3392.435 kb on + strand at 3392.757 kb on + strand, within HP15_3239 at 3392.774 kb on - strand, within HP15_3239 at 3392.812 kb on + strand, within HP15_3239 at 3392.859 kb on + strand, within HP15_3239 at 3392.872 kb on - strand, within HP15_3239 at 3392.884 kb on + strand, within HP15_3239 at 3392.893 kb on + strand, within HP15_3239 at 3392.906 kb on - strand, within HP15_3239 at 3392.953 kb on + strand, within HP15_3239 at 3393.209 kb on + strand, within HP15_3239 at 3393.288 kb on + strand, within HP15_3239 at 3393.296 kb on - strand, within HP15_3239 at 3393.296 kb on - strand, within HP15_3239
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,391,046 + HP15_3236 0.60 -0.2 3,391,047 + HP15_3236 0.60 -0.8 3,391,059 + HP15_3236 0.61 +0.5 3,391,059 + HP15_3236 0.61 -0.0 3,391,067 - HP15_3236 0.61 -0.2 3,391,113 - HP15_3236 0.64 +0.6 3,391,133 + HP15_3236 0.66 -0.4 3,391,235 + HP15_3236 0.73 -1.7 3,391,278 - HP15_3236 0.76 +0.5 3,391,401 + HP15_3236 0.84 +0.2 3,391,452 - HP15_3236 0.88 +0.3 3,391,493 - -0.4 3,391,506 - +0.1 3,391,523 - -0.1 3,391,556 - +0.0 3,391,557 - +0.2 3,391,670 + HP15_3237 0.12 -0.6 3,391,774 + HP15_3237 0.42 -0.7 3,391,881 + HP15_3237 0.72 -0.0 3,391,894 - HP15_3237 0.76 +0.1 3,391,923 + HP15_3237 0.84 -0.1 3,391,941 - HP15_3237 0.89 +1.8 3,391,967 + -0.1 3,391,987 - +0.7 3,392,076 + HP15_3238 0.22 -0.7 3,392,076 + HP15_3238 0.22 -1.5 3,392,076 + HP15_3238 0.22 -0.4 3,392,369 - -0.8 3,392,409 - +0.0 3,392,411 - +0.3 3,392,435 + -0.5 3,392,757 + HP15_3239 0.19 +0.9 3,392,774 - HP15_3239 0.20 -1.1 3,392,812 + HP15_3239 0.22 -0.9 3,392,859 + HP15_3239 0.24 -1.6 3,392,872 - HP15_3239 0.25 +0.1 3,392,884 + HP15_3239 0.25 +0.6 3,392,893 + HP15_3239 0.26 -0.1 3,392,906 - HP15_3239 0.27 +1.6 3,392,953 + HP15_3239 0.29 +1.0 3,393,209 + HP15_3239 0.42 -1.3 3,393,288 + HP15_3239 0.46 -0.2 3,393,296 - HP15_3239 0.47 +2.7 3,393,296 - HP15_3239 0.47 -1.6
Or see this region's nucleotide sequence