Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_319 and HP15_320 are separated by 95 nucleotides HP15_320 and HP15_321 overlap by 4 nucleotides HP15_321 and HP15_322 overlap by 18 nucleotides
HP15_319: HP15_319 - predicted membrane protein, at 316,724 to 317,314
_319
HP15_320: HP15_320 - dihydroneopterin aldolase, at 317,410 to 317,811
_320
HP15_321: HP15_321 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase, at 317,808 to 318,335
_321
HP15_322: HP15_322 - glucose-6-phosphate isomerase, at 318,318 to 319,979
_322
Position (kb) 317
318
319 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 316.818 kb on - strand, within HP15_319 at 316.959 kb on - strand, within HP15_319 at 316.962 kb on + strand, within HP15_319 at 317.041 kb on + strand, within HP15_319 at 317.122 kb on + strand, within HP15_319 at 317.194 kb on - strand, within HP15_319 at 317.248 kb on + strand, within HP15_319 at 317.390 kb on + strand at 317.803 kb on + strand at 317.878 kb on - strand, within HP15_321 at 317.928 kb on + strand, within HP15_321 at 318.116 kb on - strand, within HP15_321 at 318.278 kb on + strand, within HP15_321 at 318.291 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 316,818 - HP15_319 0.16 +0.6 316,959 - HP15_319 0.40 +0.6 316,962 + HP15_319 0.40 +0.3 317,041 + HP15_319 0.54 -0.0 317,122 + HP15_319 0.67 +0.3 317,194 - HP15_319 0.80 +0.7 317,248 + HP15_319 0.89 +0.2 317,390 + -1.1 317,803 + -0.9 317,878 - HP15_321 0.13 -1.3 317,928 + HP15_321 0.23 -3.6 318,116 - HP15_321 0.58 -1.5 318,278 + HP15_321 0.89 -0.7 318,291 + -1.1
Or see this region's nucleotide sequence