Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3154 and HP15_3155 are separated by 18 nucleotides HP15_3155 and HP15_3156 are separated by 15 nucleotides HP15_3156 and HP15_3157 are separated by 154 nucleotides
HP15_3154: HP15_3154 - class II aldolase/adducin family protein, at 3,307,328 to 3,308,098
_3154
HP15_3155: HP15_3155 - metal dependent phosphohydrolase, at 3,308,117 to 3,308,713
_3155
HP15_3156: HP15_3156 - glutamate-ammonia ligase, at 3,308,729 to 3,310,087
_3156
HP15_3157: HP15_3157 - homoserine O-acetyltransferase, at 3,310,242 to 3,311,273
_3157
Position (kb)
3308
3309
3310
3311 Strain fitness (log2 ratio)
-1
0
1
2 at 3307.928 kb on + strand, within HP15_3154 at 3307.936 kb on - strand, within HP15_3154 at 3308.023 kb on + strand at 3308.023 kb on + strand at 3308.032 kb on - strand at 3308.171 kb on + strand at 3308.171 kb on + strand at 3308.253 kb on - strand, within HP15_3155 at 3308.253 kb on - strand, within HP15_3155 at 3308.393 kb on - strand, within HP15_3155 at 3308.474 kb on - strand, within HP15_3155 at 3308.620 kb on - strand, within HP15_3155 at 3308.763 kb on + strand at 3308.863 kb on + strand at 3308.982 kb on - strand, within HP15_3156 at 3308.983 kb on - strand, within HP15_3156 at 3308.983 kb on - strand, within HP15_3156 at 3309.095 kb on + strand, within HP15_3156 at 3309.208 kb on + strand, within HP15_3156 at 3309.230 kb on + strand, within HP15_3156 at 3309.241 kb on + strand, within HP15_3156 at 3309.306 kb on - strand, within HP15_3156 at 3309.326 kb on + strand, within HP15_3156 at 3309.345 kb on + strand, within HP15_3156 at 3309.347 kb on + strand, within HP15_3156 at 3309.473 kb on - strand, within HP15_3156 at 3309.498 kb on + strand, within HP15_3156 at 3309.541 kb on + strand, within HP15_3156 at 3309.549 kb on - strand, within HP15_3156 at 3309.564 kb on + strand, within HP15_3156 at 3309.585 kb on - strand, within HP15_3156 at 3309.613 kb on + strand, within HP15_3156 at 3309.618 kb on + strand, within HP15_3156 at 3309.621 kb on - strand, within HP15_3156 at 3309.621 kb on - strand, within HP15_3156 at 3309.637 kb on - strand, within HP15_3156 at 3309.642 kb on + strand, within HP15_3156 at 3309.749 kb on - strand, within HP15_3156 at 3309.891 kb on + strand, within HP15_3156 at 3309.919 kb on - strand, within HP15_3156 at 3309.934 kb on + strand, within HP15_3156 at 3309.934 kb on + strand, within HP15_3156 at 3309.935 kb on - strand, within HP15_3156 at 3309.994 kb on + strand at 3309.996 kb on - strand at 3310.002 kb on - strand at 3310.081 kb on - strand at 3310.425 kb on - strand, within HP15_3157 at 3310.441 kb on + strand, within HP15_3157 at 3310.481 kb on + strand, within HP15_3157 at 3310.506 kb on + strand, within HP15_3157 at 3310.506 kb on + strand, within HP15_3157 at 3310.524 kb on + strand, within HP15_3157 at 3310.532 kb on - strand, within HP15_3157 at 3310.547 kb on - strand, within HP15_3157 at 3310.688 kb on + strand, within HP15_3157 at 3310.717 kb on - strand, within HP15_3157 at 3310.717 kb on - strand, within HP15_3157 at 3310.717 kb on - strand, within HP15_3157 at 3310.717 kb on - strand, within HP15_3157 at 3310.731 kb on + strand, within HP15_3157 at 3310.744 kb on - strand, within HP15_3157 at 3310.767 kb on + strand, within HP15_3157 at 3310.767 kb on + strand, within HP15_3157 at 3310.808 kb on + strand, within HP15_3157 at 3310.979 kb on - strand, within HP15_3157 at 3310.991 kb on - strand, within HP15_3157 at 3310.993 kb on - strand, within HP15_3157 at 3311.087 kb on + strand, within HP15_3157
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,307,928 + HP15_3154 0.78 +0.1 3,307,936 - HP15_3154 0.79 +0.0 3,308,023 + -0.2 3,308,023 + +0.4 3,308,032 - +0.7 3,308,171 + -0.3 3,308,171 + -0.0 3,308,253 - HP15_3155 0.23 +0.2 3,308,253 - HP15_3155 0.23 -1.7 3,308,393 - HP15_3155 0.46 -0.4 3,308,474 - HP15_3155 0.60 -0.7 3,308,620 - HP15_3155 0.84 -0.6 3,308,763 + +1.0 3,308,863 + -0.6 3,308,982 - HP15_3156 0.19 +0.5 3,308,983 - HP15_3156 0.19 +1.1 3,308,983 - HP15_3156 0.19 -0.6 3,309,095 + HP15_3156 0.27 -0.4 3,309,208 + HP15_3156 0.35 -0.1 3,309,230 + HP15_3156 0.37 +0.9 3,309,241 + HP15_3156 0.38 +1.6 3,309,306 - HP15_3156 0.42 +0.4 3,309,326 + HP15_3156 0.44 -0.4 3,309,345 + HP15_3156 0.45 +0.1 3,309,347 + HP15_3156 0.45 -0.3 3,309,473 - HP15_3156 0.55 -1.4 3,309,498 + HP15_3156 0.57 -0.1 3,309,541 + HP15_3156 0.60 -1.0 3,309,549 - HP15_3156 0.60 -0.3 3,309,564 + HP15_3156 0.61 +2.5 3,309,585 - HP15_3156 0.63 +1.5 3,309,613 + HP15_3156 0.65 +1.3 3,309,618 + HP15_3156 0.65 +0.2 3,309,621 - HP15_3156 0.66 -0.1 3,309,621 - HP15_3156 0.66 +0.7 3,309,637 - HP15_3156 0.67 -0.3 3,309,642 + HP15_3156 0.67 +0.4 3,309,749 - HP15_3156 0.75 -0.3 3,309,891 + HP15_3156 0.86 +0.9 3,309,919 - HP15_3156 0.88 +0.3 3,309,934 + HP15_3156 0.89 +0.5 3,309,934 + HP15_3156 0.89 +0.8 3,309,935 - HP15_3156 0.89 +0.4 3,309,994 + -0.0 3,309,996 - +0.4 3,310,002 - -0.7 3,310,081 - -0.4 3,310,425 - HP15_3157 0.18 -0.4 3,310,441 + HP15_3157 0.19 +0.0 3,310,481 + HP15_3157 0.23 -0.9 3,310,506 + HP15_3157 0.26 -0.5 3,310,506 + HP15_3157 0.26 -0.2 3,310,524 + HP15_3157 0.27 -1.0 3,310,532 - HP15_3157 0.28 -0.3 3,310,547 - HP15_3157 0.30 +0.1 3,310,688 + HP15_3157 0.43 -0.7 3,310,717 - HP15_3157 0.46 -1.1 3,310,717 - HP15_3157 0.46 +0.1 3,310,717 - HP15_3157 0.46 +0.9 3,310,717 - HP15_3157 0.46 +1.8 3,310,731 + HP15_3157 0.47 +1.9 3,310,744 - HP15_3157 0.49 +0.9 3,310,767 + HP15_3157 0.51 -0.6 3,310,767 + HP15_3157 0.51 -0.4 3,310,808 + HP15_3157 0.55 -0.6 3,310,979 - HP15_3157 0.71 +0.1 3,310,991 - HP15_3157 0.73 +0.1 3,310,993 - HP15_3157 0.73 -0.4 3,311,087 + HP15_3157 0.82 +0.4
Or see this region's nucleotide sequence